Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trmt6

Gene Name Gene ID Reads Annotation
trmt6 ENSDARG00000042344 224 tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051120-141]










Genes with expression patterns similar to trmt6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trmt6 ENSDARG00000042344 224 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051120-141]
2. kal1a kal1a 684 1.565 0.752 0.813 - - - - - - -
3. igsf21a ENSDARG00000031049 165 1.545 0.766 0.779 - - - - - - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
4. LRRC16B 84 1.487 0.723 - 0.764 - - - - - - leucine rich repeat containing 16B, transcript variant X2
5. si:ch211-212k5.2 si:ch211-212k5.2 152 1.476 - 0.767 - - - - 0.709 - -
6. chst12a ENSDARG00000028786 598 1.465 - 0.734 - - - 0.731 - - - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
7. ppa1a ENSDARG00000099933 31 1.457 - 0.725 - - - 0.732 - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
8. ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 1.446 0.704 - - - - - 0.742 - - coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]
9. morn3 ENSDARG00000021697, ENSDARG00000110843 93 0.94 - - - - - - 0.940 - - MORN repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-152]
10. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.905 - 0.905 - - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
11. fryb ENSDARG00000056001, ENSDARG00000110169 307 0.897 - - - - - 0.897 - - - furry homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080215-5]
12. cbx4 ENSDARG00000099441 372 0.885 - 0.885 - - - - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
13. dnph1 ENSDARG00000075730 403 0.88 - 0.880 - - - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
14. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.875 - - - - - - 0.875 - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
15. snip1 ENSDARG00000087528 275 0.869 - 0.869 - - - - - - - Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
16. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.868 - 0.868 - - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
17. dhx32a ENSDARG00000077461 141 0.866 - 0.866 - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 32a [Source:ZFIN;Acc:ZDB-GENE-130613-6]
18. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 0.865 0.865 - - - - - - - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
19. CABZ01049802.1 CABZ01049802.1 195 0.865 - 0.865 - - - - - - -
20. usp44 ENSDARG00000089861 1532 0.864 - 0.864 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
21. TESK1 TESK1 109 0.864 - - - - - - 0.864 - -
22. zgc:193681 187 0.863 - 0.863 - - - - - - - zgc:193681, transcript variant X1
23. efcab1 ENSDARG00000061377 234 0.859 - - - - - - 0.859 - - EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]
24. sqlea ENSDARG00000079946 145 0.858 - - 0.858 - - - - - - squalene epoxidase a [Source:ZFIN;Acc:ZDB-GENE-071004-98]
25. psip1 psip1 308 0.858 - 0.858 - - - - - - -
26. CR383676.3_1 CR383676.3_1 177 0.856 - 0.856 - - - - - - -
27. si:dkey-100n23.5 ENSDARG00000086911 427 0.854 - 0.854 - - - - - - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
28. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 0.854 - 0.854 - - - - - - - microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
29. C24H3orf58 C24H3orf58 99 0.853 - 0.853 - - - - - - -
30. PELI3 ENSDARG00000087452, ENSDARG00000111338 166 0.849 - 0.849 - - - - - - - pellino E3 ubiquitin protein ligase family member 3 [Source:ZFIN;Acc:ZDB-GENE-110304-4]
31. MEX3C 476 0.838 - 0.838 - - - - - - - mex-3 RNA binding family member C
32. tmprss13b ENSDARG00000077573 47 0.837 - 0.837 - - - - - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
33. zgc:92113 1738 0.836 - 0.836 - - - - - - - zgc:92113
34. tmem229b ENSDARG00000060569 516 0.835 - 0.835 - - - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
35. TXNDC16 ENSDARG00000032256 231 0.834 - 0.834 - - - - - - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
36. map4k3a ENSDARG00000087742 771 0.832 - 0.832 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
37. CU571081.1 ENSDARG00000113329 171 0.832 - - - - - - 0.832 - - C3a anaphylatoxin chemotactic receptor-like [Source:NCBI gene;Acc:101885604]
38. jmjd6 ENSDARG00000102896 237 0.831 - 0.831 - - - - - - - jumonji domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040426-17]
39. si:dkey-170k13.3 si:dkey-170k13.3 397 0.831 - 0.831 - - - - - - -
40. FRMPD1_1 FRMPD1_1 1589 0.831 - 0.831 - - - - - - -
41. cldnj ENSDARG00000058880 59 0.829 - - - - - - 0.829 - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
42. dhodh ENSDARG00000051889 401 0.828 - 0.828 - - - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
43. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.827 - 0.827 - - - - - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
44. creg2 ENSDARG00000000666 643 0.826 - 0.826 - - - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
45. SPAG17 SPAG17 31 0.826 - 0.826 - - - - - - -
46. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.825 - 0.825 - - - - - - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
47. sema3e ENSDARG00000036571, ENSDARG00000116446 115 0.824 - 0.824 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
48. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 0.824 - 0.824 - - - - - - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
49. H2AFX_1 H2AFX_1 28 0.824 - 0.824 - - - - - - -
50. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 0.822 - 0.822 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
51. wdr65 wdr65 251 0.821 - 0.821 - - - - - - -
52. naa30 ENSDARG00000079686 814 0.821 - 0.821 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
53. BBX ENSDARG00000012699 79 0.821 - 0.821 - - - - - - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
54. ubap2l ENSDARG00000063219 1147 0.819 - 0.819 - - - - - - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
55. tnfrsf1b ENSDARG00000070165 467 0.817 - 0.817 - - - - - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
56. phkb ENSDARG00000078284 91 0.817 - 0.817 - - - - - - - phosphorylase kinase, beta [Source:ZFIN;Acc:ZDB-GENE-110411-149]
57. RNF223 93 0.817 - 0.817 - - - - - - - ring finger protein 223
58. MAD2L1BP ENSDARG00000104943 351 0.817 - - - - - 0.817 - - - MAD2L1 binding protein [Source:ZFIN;Acc:ZDB-GENE-161230-19]
59. C23H1orf192 C23H1orf192 60 0.816 - - - - - - 0.816 - -
60. wu:fd55e03 wu:fd55e03 41 0.816 - - - - - - 0.816 - -
61. zgc:63831 ENSDARG00000009313 895 0.815 - 0.815 - - - - - - - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
62. MMP15 MMP15 88 0.814 - 0.814 - - - - - - -
63. gtpbp2 272 0.814 0.814 - - - - - - - - GTP binding protein 2
64. ZNF414 ENSDARG00000079229 846 0.813 - 0.813 - - - - - - - zinc finger protein 414 [Source:ZFIN;Acc:ZDB-GENE-070912-571]
65. wdr66 ENSDARG00000059855 276 0.812 - - - - - - 0.812 - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
66. rapgef1a ENSDARG00000043593 416 0.812 - 0.812 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
67. mecr ENSDARG00000032326 314 0.811 - 0.811 - - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
68. nr2e1 ENSDARG00000017107 340 0.81 - - - 0.810 - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
69. klfd klfd 625 0.808 - 0.808 - - - - - - -
70. CABZ01079241.1 ENSDARG00000098424 88 0.808 - 0.808 - - - - - - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
71. BAIAP2 BAIAP2 88 0.807 - 0.807 - - - - - - -
72. IQCG ENSDARG00000068678 77 0.807 - 0.807 - - - - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
73. csnk1g1 ENSDARG00000104342 57 0.806 - - - - - - 0.806 - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
74. CCDC57_1 CCDC57_1 35 0.805 - - - - - 0.805 - - -
75. mfi2 224 0.804 - 0.804 - - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
76. raver2 ENSDARG00000075034 290 0.804 - - - - - 0.804 - - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
77. srek1ip1 ENSDARG00000043728 985 0.803 - 0.803 - - - - - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
78. C1H3orf70 C1H3orf70 634 0.803 - 0.803 - - - - - - -
79. rybpa ENSDARG00000037773 904 0.802 - 0.802 - - - - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
80. FP017194.1 FP017194.1 52 0.802 - - - - - - 0.802 - -
81. illr4 ENSDARG00000008075 164 0.801 - 0.801 - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
82. si:dkey-117n7.5 ENSDARG00000089640 452 0.8 - - - - - - 0.800 - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
83. KCNA3 KCNA3 748 0.799 - - - - - 0.799 - - -
84. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 0.799 - - 0.799 - - - - - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
85. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.798 - 0.798 - - - - - - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
86. cmyb cmyb 274 0.798 - 0.798 - - - - - - -
87. ttyh3b ENSDARG00000007678 537 0.797 0.797 - - - - - - - - tweety family member 3b [Source:ZFIN;Acc:ZDB-GENE-051120-105]
88. znf280d ENSDARG00000077013 1387 0.796 - 0.796 - - - - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
89. si:ch211-225b11.1 ENSDARG00000002405 172 0.796 - 0.796 - - - - - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
90. ddx31 ENSDARG00000035507 167 0.795 - - 0.795 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
91. gadd45gip1 ENSDARG00000039338 1878 0.795 - 0.795 - - - - - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
92. GMIP ENSDARG00000077249 43 0.795 - - - - - - 0.795 - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
93. slc12a10.2 ENSDARG00000071173 92 0.795 - 0.795 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
94. cdh13 ENSDARG00000014215 106 0.795 - - - - - 0.795 - - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
95. si:ch211-207c7.6 si:ch211-207c7.6 23 0.795 - 0.795 - - - - - - -
96. eif4e2rs1 ENSDARG00000015835 589 0.794 - 0.794 - - - - - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
97. tmem72 ENSDARG00000069332 19 0.794 - 0.794 - - - - - - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
98. zgc:66433 ENSDARG00000071697 688 0.793 - 0.793 - - - - - - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
99. THAP6 THAP6 57 0.792 - 0.792 - - - - - - -
100. dcaf17 ENSDARG00000074909 913 0.791 - 0.791 - - - - - - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]

There are 488 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA