Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trmt5

Gene Name Gene ID Reads Annotation
trmt5 ENSDARG00000069278 228 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]










Genes with expression patterns similar to trmt5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trmt5 ENSDARG00000069278 228 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
2. nlgn1 ENSDARG00000077710 72 2.609 - 0.808 - - - 0.818 - 0.983 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
3. si:dkey-197c15.6 ENSDARG00000079401 745 2.367 0.786 - - 0.847 - 0.734 - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
4. zgc:174164 ENSDARG00000057138 405 2.234 - - - 0.800 - 0.706 - 0.728 - zgc:174164 [Source:ZFIN;Acc:ZDB-GENE-030131-4971]
5. gpr137 ENSDARG00000037244 801 1.827 - - - 0.864 - - - 0.963 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
6. matk ENSDARG00000074670 225 1.768 - - - 0.856 - - - 0.912 - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
7. si:zfos-364h11.1 99 1.75 - 0.769 - - - - - 0.981 - si:zfos-364h11.1, transcript variant X4
8. hcn4l ENSDARG00000074419 46 1.726 - 0.794 - - - 0.932 - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
9. tmem180 tmem180 430 1.723 - - - 0.758 - - - 0.965 -
10. hoxa11a ENSDARG00000104162 283 1.712 - - - 0.731 - - - 0.981 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
11. psmd2 ENSDARG00000103190 141 1.698 0.741 - - - - - - 0.957 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
12. elac1 ENSDARG00000045095, ENSDARG00000117014 244 1.695 - - - - - 0.734 - 0.961 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
13. rab34b ENSDARG00000010977 590 1.692 - - - 0.766 - - - 0.926 - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
14. CABZ01027552.1 CABZ01027552.1 760 1.689 - - - 0.755 - - - 0.934 -
15. BCL6B ENSDARG00000069335 602 1.688 - 0.852 - - - 0.836 - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
16. CPNE8_1 CPNE8_1 140 1.682 - - - - - 0.705 - 0.977 -
17. spop ENSDARG00000100519 177 1.678 - 0.715 - - - - - 0.963 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
18. wdr45l wdr45l 123 1.664 - 0.761 - - - 0.903 - - -
19. zbtb8os ENSDARG00000016368 284 1.653 - - - - - 0.758 - 0.895 - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
20. CNST CNST 540 1.645 - - - - - 0.719 - 0.926 -
21. AKNA ENSDARG00000087110 39 1.64 - 0.741 - - - 0.899 - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
22. sdhda ENSDARG00000055712 50 1.635 - - - - - 0.931 0.704 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
23. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 1.617 - 0.711 - - - 0.906 - - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
24. FBXL7 ENSDARG00000062251 179 1.605 - 0.883 - - - 0.722 - - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
25. foxq1b ENSDARG00000055395 549 1.604 - 0.898 - - - - 0.706 - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
26. rcan1b 556 1.587 - - - 0.774 - - - 0.813 - regulator of calcineurin 1b
27. ing1 ENSDARG00000019116 394 1.585 - - - - - 0.739 - 0.846 - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
28. luzp2 ENSDARG00000068247 80 1.582 0.701 - - - - 0.881 - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
29. MRAS ENSDARG00000075285 260 1.577 - - - 0.864 - - 0.713 - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
30. mid1 ENSDARG00000060482 154 1.575 - - - 0.825 - 0.750 - - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
31. dclk2 dclk2 719 1.574 - 0.741 - 0.833 - - - - -
32. tysnd1 ENSDARG00000074895 85 1.567 - - - - - 0.814 0.753 - - trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
33. entpd5b ENSDARG00000093659 450 1.558 0.774 0.784 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
34. PGBD4_2 PGBD4_2 184 1.557 - 0.805 - - - 0.752 - - -
35. pus7 ENSDARG00000031774 195 1.549 - 0.705 - - - 0.844 - - - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
36. gpr107 ENSDARG00000103200 238 1.549 - 0.728 - 0.821 - - - - - G protein-coupled receptor 107 [Source:ZFIN;Acc:ZDB-GENE-061103-130]
37. nelfcd ENSDARG00000021097 676 1.545 - - - - - - 0.796 0.749 - negative elongation factor complex member C/D [Source:ZFIN;Acc:ZDB-GENE-040426-720]
38. mxc ENSDARG00000024789 68 1.54 - 0.741 - - - 0.799 - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
39. TOR4A TOR4A 70 1.527 - 0.730 - - - 0.797 - - -
40. chm ENSDARG00000003845 498 1.527 - - - - - - - 0.806 0.721 choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
41. glg1b ENSDARG00000101210 177 1.525 - 0.748 - 0.777 - - - - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
42. CT030712.1 ENSDARG00000044355 83 1.525 - 0.808 - - 0.717 - - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
43. ucn3l ENSDARG00000087241 29 1.521 0.701 0.820 - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
44. si:ch211-110p13.9 ENSDARG00000093821 82 1.52 - - - 0.798 - - - - 0.722 si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
45. METTL18 ENSDARG00000074588 918 1.513 - - - - - 0.755 - 0.758 - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
46. CR388132.1 ENSDARG00000097728 61 1.508 0.705 0.803 - - - - - - -
47. gpr98 gpr98 717 1.502 0.741 - - - - - - 0.761 -
48. herc2 ENSDARG00000073841 486 1.489 - - - 0.781 - 0.708 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
49. CABZ01062780.1 CABZ01062780.1 250 1.486 - 0.713 - 0.773 - - - - -
50. ecm2 ENSDARG00000071549 1527 1.483 - - - 0.718 - 0.765 - - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
51. FTL FTL 53 1.481 - 0.731 - - - 0.750 - - -
52. coq4 ENSDARG00000104733 402 1.473 - 0.744 - 0.729 - - - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
53. si:dkey-20i20.11 ENSDARG00000101885 17 1.465 - 0.741 - - - - - - 0.724 si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
54. dnase2 ENSDARG00000073893 141 1.463 - 0.741 - - - 0.722 - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
55. CABZ01060296.1 CABZ01060296.1 9 1.459 - 0.741 - - - - - - 0.718
56. SLC47A1_2 SLC47A1_2 50 1.442 0.701 0.741 - - - - - - -
57. cx52.9 ENSDARG00000086453 7 1.442 0.701 0.741 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
58. LPL ENSDARG00000087697 18 1.442 0.701 0.741 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
59. mcm5_1 ENSDARG00000019507 10 1.427 0.701 - - - 0.726 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
60. ba1 69 0.997 - - - - - - - 0.997 - ba1 globin
61. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.997 - - - - - - - 0.997 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
62. KIF21B ENSDARG00000009733 53 0.997 - - - - - - - 0.997 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
63. BX511006.2 BX511006.2 29 0.996 - - - - - - - 0.996 -
64. bcl3 ENSDARG00000087832 69 0.995 - - - - - - - 0.995 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
65. srd5a2a ENSDARG00000043587 21 0.993 - - - - - - - 0.993 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
66. GABRR1 ENSDARG00000043902 71 0.993 - - - - - - - 0.993 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
67. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.992 - - - - - - - 0.992 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
68. tmprss13b ENSDARG00000077573 47 0.992 - - - - - - - 0.992 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
69. ubr1 ENSDARG00000060480 71 0.991 - - - - - - - 0.991 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
70. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.989 - - - - - - - 0.989 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
71. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.986 - - - - - - - 0.986 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
72. si:ch1073-174d20.2 ENSDARG00000079651 171 0.986 - - - - - - - 0.986 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
73. si:dkey-152b24.6 ENSDARG00000105043 39 0.985 - - - - - - - 0.985 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
74. nphp4 ENSDARG00000069014 77 0.984 - - - - - - - 0.984 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
75. lrriq1 ENSDARG00000093781 83 0.982 - - - - - - - 0.982 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
76. CT573468.1 CT573468.1 283 0.981 - - - - - - - 0.981 -
77. slc5a3a ENSDARG00000010376 134 0.981 - - - - - - - 0.981 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
78. ZBTB8A ENSDARG00000059226 98 0.979 - - - - - - - 0.979 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
79. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.977 - - - - - - - 0.977 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
80. ASPH ENSDARG00000055945 214 0.975 - - - - - - - 0.975 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
81. CU469544.1 CU469544.1 219 0.974 - - - - - - - 0.974 -
82. CABZ01078431.1 CABZ01078431.1 183 0.973 - - - - - - - 0.973 -
83. RHBDF1 RHBDF1 131 0.973 - - - - - - - 0.973 -
84. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.972 - - - - - - - 0.972 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
85. GFRAL ENSDARG00000089709 167 0.971 - - - - - - - 0.971 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
86. cul1b ENSDARG00000007691 719 0.969 - - - - - - - 0.969 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
87. trim23 ENSDARG00000069420 103 0.967 - - - - - 0.967 - - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
88. atrip ENSDARG00000063076 385 0.967 - - - - - - - 0.967 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
89. htra1b ENSDARG00000014907 146 0.966 - - - - - 0.966 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
90. cnn1b ENSDARG00000102398 40 0.965 - - - - - - - 0.965 - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
91. si:dkey-238g7.2 si:dkey-238g7.2 181 0.963 - - - - - - - 0.963 -
92. si:dkey-4c15.12 ENSDARG00000095350 119 0.963 - 0.963 - - - - - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
93. her4.3 ENSDARG00000070770 613 0.962 - 0.962 - - - - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
94. slc2a15b ENSDARG00000053269 899 0.961 - - - - - - - 0.961 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
95. BX897726.3 BX897726.3 220 0.961 - - - - - - - 0.961 -
96. CU104697.1 CU104697.1 19 0.961 - - - - - 0.961 - - -
97. THEM6_1 ENSDARG00000103914 469 0.96 - - - - - - - 0.960 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
98. ovol1 1037 0.959 - - - - - - - 0.959 - ovo-like zinc finger 1, transcript variant X1
99. mob3c ENSDARG00000043705 306 0.958 - - - - - - - 0.958 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
100. trmt10c ENSDARG00000041575 447 0.957 - - - - - - - 0.957 - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:ZFIN;Acc:ZDB-GENE-041114-12]

There are 1371 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA