Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trmt1

Gene Name Gene ID Reads Annotation
trmt1 ENSDARG00000010978 72 tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]










Genes with expression patterns similar to trmt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trmt1 ENSDARG00000010978 72 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
2. SPAG17 SPAG17 31 1.818 0.923 - - - - 0.895 - - -
3. sst2 ENSDARG00000014190 617 1.694 0.799 - - - - 0.895 - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
4. fgf11a ENSDARG00000069662, ENSDARG00000112344, ENSDARG00000114321 104 1.685 0.972 0.713 - - - - - - - fibroblast growth factor 11a [Source:ZFIN;Acc:ZDB-GENE-050221-5]
5. dnajc17 ENSDARG00000104959 70 1.648 - 0.821 - - - 0.827 - - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
6. dnase1l3l dnase1l3l 16 1.643 0.799 - - - 0.844 - - - -
7. gabpb1 ENSDARG00000023659 26 1.629 0.799 - - - - - - 0.830 - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
8. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.561 - - 0.717 - 0.844 - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
9. CACNA2D1 ENSDARG00000073752 6 1.557 - - - - - 0.827 - 0.730 - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
10. socs1a ENSDARG00000038095 20 1.522 0.799 - - - - 0.723 - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
11. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.517 0.750 - - - - - - 0.767 - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
12. nr2e1 ENSDARG00000017107 340 1.516 0.799 - - 0.717 - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
13. si:dkey-86e18.1 ENSDARG00000043536 75 1.505 - 0.773 - - - 0.732 - - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
14. spata17 ENSDARG00000054414 64 1.503 0.768 - - - - 0.735 - - - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
15. tnnt2a ENSDARG00000020610 313 1 1.000 - - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
16. ITGAE ITGAE 53 1 1.000 - - - - - - - -
17. hoxd13a ENSDARG00000059256 1190 1 1.000 - - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
18. lad1 ENSDARG00000022698 127 1 1.000 - - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
19. HSPB11 ENSDARG00000002204 170 0.978 0.978 - - - - - - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
20. rsph3 ENSDARG00000043470 74 0.972 0.972 - - - - - - - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
21. henmt1 ENSDARG00000018871 46 0.963 0.963 - - - - - - - - HEN methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-387]
22. igfbp3 ENSDARG00000099144 269 0.951 0.951 - - - - - - - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
23. FOLR1 FOLR1 25 0.951 0.951 - - - - - - - -
24. FP236810.2 ENSDARG00000113218 140 0.946 0.946 - - - - - - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
25. cfp ENSDARG00000094451 211 0.939 0.939 - - - - - - - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
26. pm20d1.2 ENSDARG00000062096 97 0.935 0.935 - - - - - - - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
27. dpyda dpyda 12 0.933 0.933 - - - - - - - -
28. efhc2 ENSDARG00000004204 59 0.931 0.931 - - - - - - - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
29. tdrd9 ENSDARG00000013453 22 0.926 0.926 - - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
30. FOXN2 FOXN2 118 0.926 0.926 - - - - - - - -
31. si:ch211-102c2.8 ENSDARG00000093823 168 0.926 0.926 - - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
32. si:ch211-270n8.4 87 0.926 0.926 - - - - - - - - si:ch211-270n8.4
33. si:dkey-4c15.14 ENSDARG00000094410 107 0.926 0.926 - - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
34. cep70 ENSDARG00000076965 140 0.919 - - - - - 0.919 - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
35. mfap4 ENSDARG00000090783 480 0.915 0.915 - - - - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
36. wdr65 wdr65 251 0.914 0.914 - - - - - - - -
37. sod2 ENSDARG00000042644 1382 0.911 0.911 - - - - - - - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
38. SLC46A2 ENSDARG00000075229 78 0.904 0.904 - - - - - - - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
39. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.903 0.903 - - - - - - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
40. CT027705.3 CT027705.3 9 0.895 - - - - - 0.895 - - -
41. wu:fb39e10 wu:fb39e10 23 0.895 - - - - - 0.895 - - -
42. atp2b1b ENSDARG00000007788 56 0.895 - - - - - 0.895 - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
43. HIST1H2BA_1 ENSDARG00000116654 37 0.895 - - - - - 0.895 - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
44. pcsk9 ENSDARG00000074185 8 0.895 - - - - - 0.895 - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
45. ankrd37 ENSDARG00000056376 131 0.895 - - - - - 0.895 - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
46. si:dkey-238m4.1 si:dkey-238m4.1 71 0.895 - - - - - 0.895 - - -
47. pkmyt1 ENSDARG00000074730 213 0.894 0.894 - - - - - - - - protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
48. si:ch211-193k19.2 ENSDARG00000077572 35 0.892 - - - - - - - - 0.892 si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
49. ctu2 ENSDARG00000051851 68 0.892 0.892 - - - - - - - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
50. cc2d2a ENSDARG00000090971 363 0.89 0.890 - - - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
51. mhc1zea ENSDARG00000001470 184 0.886 - - - - - 0.886 - - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
52. pik3c2b ENSDARG00000086927 864 0.886 - 0.886 - - - - - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
53. pcp4l1 ENSDARG00000023181 117 0.884 0.884 - - - - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
54. fignl1 ENSDARG00000016427 636 0.883 - 0.883 - - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
55. astn1 ENSDARG00000068323 348 0.882 0.882 - - - - - - - - astrotactin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-140]
56. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.879 0.879 - - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
57. mctp2b ENSDARG00000073970 238 0.878 0.878 - - - - - - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
58. QRFPR ENSDARG00000101969 47 0.872 - - - - - 0.872 - - - pyroglutamylated RFamide peptide receptor [Source:HGNC Symbol;Acc:HGNC:15565]
59. kcnj1a.1 ENSDARG00000091232 110 0.869 0.869 - - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
60. cacng6b ENSDARG00000046079 258 0.868 - 0.868 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
61. zdhhc3 zdhhc3 152 0.868 - 0.868 - - - - - - -
62. odf3b ENSDARG00000114397, ENSDARG00000116899 21 0.864 0.864 - - - - - - - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
63. fancd2 ENSDARG00000053574 247 0.859 0.859 - - - - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
64. CU638740.1_1 CU638740.1_1 387 0.858 - 0.858 - - - - - - -
65. tsc1a ENSDARG00000026048, ENSDARG00000113789, ENSDARG00000113892 439 0.855 0.855 - - - - - - - - TSC complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9111]
66. pdzk1 ENSDARG00000022261 398 0.855 0.855 - - - - - - - - PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
67. BX004890.2 BX004890.2 84 0.854 0.854 - - - - - - - -
68. sim1a ENSDARG00000023316 190 0.853 - - - - - 0.853 - - - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
69. hspb7 ENSDARG00000104441 1417 0.853 - 0.853 - - - - - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
70. pax3b ENSDARG00000028348 388 0.852 - 0.852 - - - - - - - paired box 3b [Source:ZFIN;Acc:ZDB-GENE-080917-53]
71. tekt2 ENSDARG00000028973 160 0.851 0.851 - - - - - - - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
72. rad17 ENSDARG00000018918 332 0.85 - - - - - 0.850 - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
73. si:dkeyp-123a12.2 ENSDARG00000115029 78 0.85 - - - - 0.850 - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
74. CT583679.2 CT583679.2 10 0.85 - - - - 0.850 - - - -
75. PLXNB2_1 PLXNB2_1 10 0.849 - - - - 0.849 - - - -
76. dapk2 dapk2 24 0.849 - - - - 0.849 - - - -
77. ABR ENSDARG00000095180 4 0.849 - - - - 0.849 - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
78. zgc:113278 ENSDARG00000037813 525 0.848 - 0.848 - - - - - - - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
79. MFSD3 MFSD3 407 0.848 - 0.848 - - - - - - -
80. zgc:193751 zgc:193751 2 0.846 - - - - 0.846 - - - -
81. crfb12 ENSDARG00000052413 47 0.846 - - - - 0.846 - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
82. musk ENSDARG00000098764 438 0.846 - 0.846 - - - - - - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
83. MSS51 ENSDARG00000075463 428 0.845 - 0.845 - - - - - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
84. myf6 ENSDARG00000029830 1911 0.845 - 0.845 - - - - - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
85. notch1a ENSDARG00000103554 498 0.845 - 0.845 - - - - - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
86. srd5a2a ENSDARG00000043587 21 0.844 - - - - 0.844 - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
87. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 0.844 - - - - 0.844 - - - -
88. CABZ01064968.3 CABZ01064968.3 4 0.844 - - - - 0.844 - - - -
89. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 0.844 - - - - 0.844 - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
90. VMO1 VMO1 11 0.844 - - - - 0.844 - - - -
91. znfl1 ENSDARG00000037914 2 0.844 - - - - 0.844 - - - - zinc finger-like gene 1 [Source:ZFIN;Acc:ZDB-GENE-030828-6]
92. si:ch211-217k17.3 si:ch211-217k17.3 2 0.844 - - - - 0.844 - - - -
93. si:dkey-216e24.4 si:dkey-216e24.4 14 0.844 - - - - 0.844 - - - -
94. abca4b ENSDARG00000062661 2 0.844 - - - - 0.844 - - - - ATP-binding cassette, sub-family A (ABC1), member 4b [Source:ZFIN;Acc:ZDB-GENE-050517-4]
95. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 0.844 - - - - 0.844 - - - -
96. C7H15orf43 C7H15orf43 10 0.844 - - - - 0.844 - - - -
97. si:dkeyp-66d1.2 si:dkeyp-66d1.2 2 0.844 - - - - 0.844 - - - -
98. coro6 ENSDARG00000102272 76 0.843 0.843 - - - - - - - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
99. si:ch211-282k23.2 ENSDARG00000093591 447 0.841 0.841 - - - - - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
100. tpte ENSDARG00000056985 724 0.84 - 0.840 - - - - - - - transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]

There are 721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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