Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trit1

Gene Name Gene ID Reads Annotation
trit1 ENSDARG00000032876, ENSDARG00000113110 331 tRNA isopentenyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-297]










Genes with expression patterns similar to trit1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trit1 ENSDARG00000032876, ENSDARG00000113110 331 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA isopentenyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-297]
2. ube2d4 ENSDARG00000015057 1089 1.484 0.761 0.723 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
3. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.475 0.771 0.704 - - - - - - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
4. APOL4 APOL4 27 1.474 - - - - - 0.731 0.743 - -
5. CR774186.2 CR774186.2 104 1.468 - - - - - 0.709 0.759 - -
6. BCL6B ENSDARG00000069335 602 1.452 0.726 - - - - 0.726 - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
7. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.45 - - - - - 0.732 0.718 - - KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
8. slc26a2 ENSDARG00000011618 355 0.93 - 0.930 - - - - - - - solute carrier family 26 (anion exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-030717-3]
9. rnf24 ENSDARG00000036965 226 0.911 - - - - - - 0.911 - - ring finger protein 24 [Source:ZFIN;Acc:ZDB-GENE-041114-40]
10. hecw1 hecw1 241 0.909 - - - - - - 0.909 - -
11. rab34a ENSDARG00000045628, ENSDARG00000113347 358 0.907 - - - - - - 0.907 - - RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]
12. si:dkey-103i16.2 si:dkey-103i16.2 492 0.906 - - - - - - 0.906 - -
13. hyi ENSDARG00000030166 1199 0.896 - - - - - 0.896 - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
14. HERC4 ENSDARG00000059936 369 0.887 0.887 - - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
15. CU075695.3 CU075695.3 253 0.886 - 0.886 - - - - - - -
16. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.883 - - - - - 0.883 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
17. h2afx ENSDARG00000029406 2116 0.882 - - - - - - 0.882 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
18. rnpc3 ENSDARG00000011247 778 0.872 - - - - - 0.872 - - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
19. nudt5 ENSDARG00000078073 779 0.871 - - - - - 0.871 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
20. wu:fc17b08 ENSDARG00000094249 427 0.867 - 0.867 - - - - - - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
21. plxnb3 ENSDARG00000032990 98 0.863 - - - - - - 0.863 - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
22. inppl1b ENSDARG00000001442 41 0.862 - - - - - 0.862 - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
23. si:ch211-51o18.2 si:ch211-51o18.2 111 0.859 - - - - - 0.859 - - -
24. dnal1 ENSDARG00000034042 339 0.858 - - - - - - 0.858 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
25. CABZ01072585.1 CABZ01072585.1 1587 0.849 - - - - - 0.849 - - -
26. errfi1 errfi1 979 0.844 - - - - - 0.844 - - -
27. mybbp1a ENSDARG00000078214 2458 0.844 - - - - - 0.844 - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
28. mpp6a ENSDARG00000056892 324 0.844 0.844 - - - - - - - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
29. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.844 - - - - - 0.844 - - - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
30. scp2a ENSDARG00000012194 614 0.843 - - - - - 0.843 - - - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
31. si:dkeyp-72g9.4 ENSDARG00000073704 98 0.842 - - - - - 0.842 - - - si:dkeyp-72g9.4 [Source:ZFIN;Acc:ZDB-GENE-031204-23]
32. meis3 ENSDARG00000002795 2509 0.842 - - - - - - 0.842 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
33. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 0.841 - - - - - 0.841 - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
34. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 0.839 - - - - - - 0.839 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
35. narf ENSDARG00000024184, ENSDARG00000110086 240 0.839 - - - - - - 0.839 - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
36. ANKRD40 ENSDARG00000076490 748 0.838 - - - - - 0.838 - - - ankyrin repeat domain 40 [Source:ZFIN;Acc:ZDB-GENE-120612-2]
37. irs1 ENSDARG00000054087 1809 0.838 - - - - - 0.838 - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
38. mxra5a ENSDARG00000074815 628 0.838 - - - - - 0.838 - - - matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]
39. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 0.837 - - - - - - 0.837 - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
40. dynlt1 ENSDARG00000045909 2451 0.836 - - - - - - 0.836 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
41. lonrf1l ENSDARG00000078567 1049 0.833 - - - - - 0.833 - - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
42. sytl2 sytl2 259 0.831 - - - - - 0.831 - - -
43. CT573103.1 ENSDARG00000097550 950 0.831 - - - - - 0.831 - - -
44. ccnb2 ENSDARG00000036180 533 0.83 - 0.830 - - - - - - - cyclin B2 [Source:ZFIN;Acc:ZDB-GENE-030429-12]
45. slc17a5 ENSDARG00000055190 857 0.83 - - - - - 0.830 - - - solute carrier family 17 (acidic sugar transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060929-1158]
46. inpp4b ENSDARG00000075201 267 0.83 - - - - - 0.830 - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
47. inaa ENSDARG00000011862 115 0.83 - - - - - 0.830 - - - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
48. fbxl14b ENSDARG00000045801 965 0.827 - - - - - - 0.827 - - F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
49. nptx2a ENSDARG00000037794 127 0.827 0.827 - - - - - - - - neuronal pentraxin 2a [Source:ZFIN;Acc:ZDB-GENE-060707-1]
50. CU306817.2 CU306817.2 406 0.826 0.826 - - - - - - - -
51. slc3a1 ENSDARG00000017165 136 0.826 - - - - - - 0.826 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
52. me2 ENSDARG00000100718, ENSDARG00000114435 138 0.825 - 0.825 - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
53. si:ch73-109d9.1 ENSDARG00000052019 248 0.825 - 0.825 - - - - - - - si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
54. jagn1b ENSDARG00000014995 2063 0.823 - - - - - 0.823 - - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
55. cx39.9 ENSDARG00000004082 148 0.822 0.822 - - - - - - - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
56. CABZ01016567.1 CABZ01016567.1 73 0.822 - 0.822 - - - - - - -
57. cables2a ENSDARG00000076964 1330 0.821 - - - - - 0.821 - - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
58. g6pca.1 ENSDARG00000031616 401 0.821 - - - - - 0.821 - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
59. selenbp1 ENSDARG00000024717, ENSDARG00000112316 1407 0.819 - - - - - 0.819 - - - selenium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1436]
60. TONSL ENSDARG00000071294, ENSDARG00000116200 285 0.819 - - - - - 0.819 - - - tonsoku-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-041111-230]
61. nfasca ENSDARG00000061099, ENSDARG00000109524 275 0.818 - 0.818 - - - - - - - neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
62. NUMA1_2 NUMA1_2 2897 0.818 - - - - - - 0.818 - -
63. neurl4 ENSDARG00000078127, ENSDARG00000116566 334 0.818 - - - - - 0.818 - - - neuralized E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-100318-4]
64. ptprz1a ENSDARG00000051814 385 0.817 - 0.817 - - - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
65. daam2 ENSDARG00000028393 226 0.817 - - - - - 0.817 - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
66. hkdc1 ENSDARG00000038703, ENSDARG00000115664 146 0.816 - - - - - 0.816 - - - hexokinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9801]
67. alg14 ENSDARG00000103093, ENSDARG00000114160, ENSDARG00000116808 95 0.815 - - - - - 0.815 - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-041010-195]
68. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 0.815 - - - - - 0.815 - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
69. PRSS16 ENSDARG00000076602 963 0.815 - - - - - 0.815 - - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
70. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.812 - - - - - - 0.812 - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
71. gpatch4 ENSDARG00000091931 923 0.811 - - - - - - 0.811 - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
72. si:dkey-239h2.3 ENSDARG00000092033 398 0.811 - - - - - - 0.811 - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
73. pptc7a ENSDARG00000011122 739 0.811 - - - - - 0.811 - - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
74. HBQ1 HBQ1 413 0.811 - 0.811 - - - - - - -
75. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 0.809 - - - - - - 0.809 - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
76. NUAK1 NUAK1 1074 0.809 - - - - - 0.809 - - -
77. CCDC114 ENSDARG00000015010 190 0.807 - - - - - 0.807 - - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
78. si:ch211-28p3.4 ENSDARG00000091009 280 0.805 - 0.805 - - - - - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
79. MDC1 ENSDARG00000086764 1851 0.802 - - - - - - 0.802 - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
80. slc7a14a ENSDARG00000010816 425 0.801 - 0.801 - - - - - - - solute carrier family 7, member 14a [Source:ZFIN;Acc:ZDB-GENE-070912-112]
81. nucb1 ENSDARG00000054833 2009 0.798 - - - - - 0.798 - - - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
82. zgc:195001 ENSDARG00000070484 3281 0.797 - 0.797 - - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
83. RELL1 ENSDARG00000018312 579 0.797 - - - - - 0.797 - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
84. dmd ENSDARG00000008487, ENSDARG00000115779 536 0.796 - 0.796 - - - - - - - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
85. gpr63 ENSDARG00000074540 242 0.793 - - - - - - 0.793 - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
86. prrg4 ENSDARG00000030753 1008 0.793 - - - - - 0.793 - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
87. zgc:101664 ENSDARG00000035700 530 0.792 - - - - - 0.792 - - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
88. bmp8a ENSDARG00000035677 40 0.792 - - - - - - 0.792 - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
89. nr2c2ap ENSDARG00000056162 368 0.79 - - - - - 0.790 - - - nuclear receptor 2C2-associated protein [Source:ZFIN;Acc:ZDB-GENE-050208-758]
90. bambia ENSDARG00000055381 2922 0.79 - - - - - 0.790 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
91. MTHFS ENSDARG00000104487 770 0.789 - - - - - 0.789 - - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
92. si:ch211-214p16.2 ENSDARG00000094975 59 0.789 - 0.789 - - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
93. zgc:112265 ENSDARG00000100406 339 0.789 - - - - - 0.789 - - - zgc:112265 [Source:ZFIN;Acc:ZDB-GENE-050626-133]
94. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 0.788 - - - - - - 0.788 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
95. zgc:136858 ENSDARG00000070830 165 0.787 - - - - - 0.787 - - - zgc:136858 [Source:ZFIN;Acc:ZDB-GENE-060421-6632]
96. pprc1 ENSDARG00000090337 434 0.787 - 0.787 - - - - - - - peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9858]
97. cdk16_1 ENSDARG00000032072 2031 0.787 - - - - - 0.787 - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
98. ccdc146 ENSDARG00000004794 108 0.786 - - - - - - 0.786 - - coiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
99. pim3 ENSDARG00000055129 1517 0.786 - - - - - 0.786 - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
100. hoxb10a ENSDARG00000011579 2135 0.786 - - - - - - 0.786 - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]

There are 545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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