Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trip4

Gene Name Gene ID Reads Annotation
trip4 ENSDARG00000098074 79 thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]










Genes with expression patterns similar to trip4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trip4 ENSDARG00000098074 79 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
2. CABZ01081748.1 ENSDARG00000102139 31 1.935 - - 0.935 - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
3. si:ch211-260m19.8 si:ch211-260m19.8 33 1.931 - - 0.931 - - 1.000 - - -
4. zgc:171422 ENSDARG00000104715 255 1.91 - - - 0.974 - - 0.936 - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
5. Metazoa_SRP_6 Metazoa_SRP_6 7 1.878 0.878 1.000 - - - - - - -
6. CABZ01078314.1 CABZ01078314.1 44 1.878 0.878 - - - - 1.000 - - -
7. si:ch211-203k16.3 ENSDARG00000069305 21 1.878 0.878 - - - - 1.000 - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
8. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.86 0.878 - - 0.982 - - - - -
9. BX004873.3 BX004873.3 59 1.85 0.878 - 0.972 - - - - - -
10. plxnb3 ENSDARG00000032990 98 1.812 0.889 - 0.923 - - - - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
11. fgf20b ENSDARG00000086070 13 1.795 - - - - - 1.000 0.795 - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
12. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1.791 0.791 1.000 - - - - - - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
13. ptn ENSDARG00000102340 229 1.781 0.832 - 0.949 - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
14. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.771 - - - 0.894 - - 0.877 - - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
15. nalcn ENSDARG00000001835 294 1.762 - - - 0.968 - - 0.794 - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
16. EFEMP1 32 1.749 - 0.808 - - - 0.941 - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
17. tmem168a ENSDARG00000068705 498 1.745 - - 0.855 0.890 - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
18. FP102191.1 FP102191.1 21 1.737 - - - - - 1.000 0.737 - -
19. BX927369.1 ENSDARG00000105047 21 1.732 - - - - - 1.000 0.732 - -
20. CLEC17A CLEC17A 42 1.719 - 0.808 - - - 0.911 - - -
21. sts ENSDARG00000053241 10 1.717 - - - - - 1.000 0.717 - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
22. ARHGEF40 ENSDARG00000078979 25 1.717 - - - - - 1.000 0.717 - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
23. CU457778.1 ENSDARG00000098976 38 1.717 - - - - - 1.000 0.717 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
24. figf 48 1.712 - - - 0.961 - 0.751 - - - c-fos induced growth factor, transcript variant X2
25. KLHL33 ENSDARG00000105343 219 1.711 - - 0.764 0.947 - - - - - kelch-like family member 33 [Source:ZFIN;Acc:ZDB-GENE-131016-4]
26. chic2 ENSDARG00000022690 184 1.708 - - 0.757 0.951 - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
27. gpr63 ENSDARG00000074540 242 1.693 - 0.926 - - - - 0.767 - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
28. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.686 0.878 0.808 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
29. atp8b3 ENSDARG00000042285 31 1.686 0.878 0.808 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
30. si:dkey-15h19.3 si:dkey-15h19.3 5 1.686 0.878 0.808 - - - - - - -
31. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.667 - - 0.721 0.946 - - - - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
32. cdkn2c ENSDARG00000057610 179 1.666 - - 0.818 - - - 0.848 - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
33. BX324003.2 ENSDARG00000109802 178 1.665 - - - 0.903 - - 0.762 - -
34. si:dkey-78a14.5 14 1.656 - - - - - 0.939 0.717 - - si:dkey-78a14.5, transcript variant X2
35. vps13d ENSDARG00000017986 183 1.622 - - - 0.898 - - 0.724 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
36. zgc:113060 zgc:113060 63 1.621 - 0.913 - - - 0.708 - - -
37. nanp ENSDARG00000075143, ENSDARG00000114467 328 1.618 - - 0.849 0.769 - - - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
38. msxa msxa 263 1.616 - - 0.762 0.854 - - - - -
39. FAM46A FAM46A 81 1.601 - - - - - 0.884 0.717 - -
40. CABZ01112215.1 CABZ01112215.1 23 1.595 0.878 - - - - - 0.717 - -
41. AL935046.1 AL935046.1 89 1.594 0.718 - - - - 0.876 - - -
42. DSP DSP 199 1.589 0.750 - 0.839 - - - - - -
43. erap2 ENSDARG00000098618 16 1.586 0.878 - - - - 0.708 - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
44. zgc:123217 ENSDARG00000059026 292 1.582 - 0.808 0.774 - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
45. kif6 ENSDARG00000053240 75 1.57 0.785 - - - - 0.785 - - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
46. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.559 - - - 0.835 - - 0.724 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
47. scaper ENSDARG00000023104 491 1.554 - - 0.706 0.848 - - - - - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
48. oxgr1a.1 ENSDARG00000033684 24 1.538 0.730 0.808 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
49. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.537 - - 0.783 0.754 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
50. BX322787.1 ENSDARG00000105779 381 1.531 0.758 0.773 - - - - - - -
51. anks4b ENSDARG00000036846 8 1.53 - 0.808 - - - 0.722 - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
52. serpinb1l2 ENSDARG00000070396 37 1.525 - 0.808 - - - - 0.717 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
53. CLDND1_1 CLDND1_1 50 1.525 - 0.808 - - - - 0.717 - -
54. si:ch73-115f13.1 si:ch73-115f13.1 15 1.525 - 0.808 - - - - 0.717 - -
55. BX682552.2_1 BX682552.2_1 37 1.516 - 0.808 - - - - 0.708 - -
56. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 1.499 - - 0.739 0.760 - - - - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
57. spns3 ENSDARG00000035459, ENSDARG00000115176 42 1.492 0.711 - - - - 0.781 - - - spinster homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060531-7]
58. CABZ01071911.2 CABZ01071911.2 64 1.48 0.765 - - - - - 0.715 - -
59. colgalt1 ENSDARG00000073974 1473 1.446 - 0.717 - 0.729 - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
60. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
61. MPP3 MPP3 13 1 - - - - - 1.000 - - -
62. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
63. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
64. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
65. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
66. fndc7 fndc7 3 1 - - - - - 1.000 - - -
67. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
68. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
69. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
70. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 - - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
71. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
72. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
73. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
74. ndst2b ENSDARG00000060678 453 1 - 1.000 - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
75. FAM200A FAM200A 19 1 - 1.000 - - - - - - -
76. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
77. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
78. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
79. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
80. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
81. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
82. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
83. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
84. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
85. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
86. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
87. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
88. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
89. CU571315.2 ENSDARG00000101956 15 1 - - - - - 1.000 - - -
90. tmem119a ENSDARG00000095259 1 1 - - - - - 1.000 - - - transmembrane protein 119a [Source:ZFIN;Acc:ZDB-GENE-060526-69]
91. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
92. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
93. ctssa ctssa 24 1 - - - - - 1.000 - - -
94. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - 1.000 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
95. nif3l1 ENSDARG00000045249 28 1 - - - - - 1.000 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
96. si:ch211-30g3.8 si:ch211-30g3.8 10 1 - - - - - 1.000 - - -
97. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
98. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
99. si:ch211-283l16.1 ENSDARG00000112586 131 1 - 1.000 - - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
100. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]

There are 1447 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA