Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trip13

Gene Name Gene ID Reads Annotation
trip13 ENSDARG00000025043 796 thyroid hormone receptor interactor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1488]










Genes with expression patterns similar to trip13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trip13 ENSDARG00000025043 796 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor interactor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1488]
2. taf7 ENSDARG00000019572 1305 1.624 - - - 0.826 - - 0.798 - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
3. espl1 ENSDARG00000075354 818 1.617 - - - 0.837 - - 0.780 - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
4. dhx16 ENSDARG00000013150 436 1.572 - 0.778 - - - - 0.794 - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:ZFIN;Acc:ZDB-GENE-030131-8589]
5. sumo3b ENSDARG00000035993 3414 1.563 - - - 0.831 0.732 - - - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
6. synj1 ENSDARG00000025011, ENSDARG00000110664, ENSDARG00000111319 542 1.562 - 0.771 - - - - 0.791 - - synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]
7. CCDC71 CCDC71 2442 1.562 - 0.789 - - - 0.773 - - -
8. tspan13b ENSDARG00000070479 542 1.548 - 0.744 - - - - 0.804 - - tetraspanin 13b [Source:ZFIN;Acc:ZDB-GENE-041010-45]
9. BX950186.2 BX950186.2 1267 1.539 - - - 0.728 - - 0.811 - -
10. pgam5 ENSDARG00000035608 4044 1.536 0.775 - - 0.761 - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
11. nvl ENSDARG00000025605 497 1.531 - 0.758 - 0.773 - - - - - nuclear VCP-like [Source:ZFIN;Acc:ZDB-GENE-040426-2871]
12. zbtb20 ENSDARG00000005586 195 1.509 - - - - - - 0.762 - 0.747 zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
13. g3bp1 ENSDARG00000017741 7622 1.503 - - - - - - 0.789 - 0.714 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
14. pou3f2a ENSDARG00000070220 817 1.501 - - - - 0.752 - - - 0.749 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
15. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.5 0.797 - - - - - - - 0.703 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
16. cebpz ENSDARG00000045857 270 1.494 - 0.728 - - - - 0.766 - - CCAAT enhancer binding protein zeta [Source:ZFIN;Acc:ZDB-GENE-050417-261]
17. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.492 - - 0.739 - - - - - 0.753 activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
18. sephs1 ENSDARG00000058292 3347 1.492 - - - - 0.745 0.747 - - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
19. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.488 - 0.712 - - - 0.776 - - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
20. taf10 ENSDARG00000068641 3333 1.487 - - - - - 0.761 0.726 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
21. rnaseh2a ENSDARG00000018891 1979 1.479 - - - - - - 0.751 0.728 - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
22. fam57ba ENSDARG00000026875 504 1.474 0.763 - - - - - - - 0.711 family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
23. GSTK1_1 GSTK1_1 316 1.451 - 0.722 - - - - 0.729 - -
24. efna2 efna2 428 1.445 - - - - 0.734 - - - 0.711
25. ift46 ENSDARG00000011240 2499 1.445 - 0.741 - 0.704 - - - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
26. pcdh19 ENSDARG00000034344 2378 1.444 - - - - 0.729 - - - 0.715 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
27. rbb4 rbb4 15541 1.442 - - 0.727 - - - - - 0.715
28. sh3glb2a ENSDARG00000008983 452 1.433 - - - - - 0.703 0.730 - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
29. TAF15 ENSDARG00000070019 5102 1.432 - - - - 0.730 - - - 0.702 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
30. csk ENSDARG00000067996 834 1.43 - 0.719 - 0.711 - - - - - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
31. ybx1 ENSDARG00000004757 916 1.425 - 0.724 - - - 0.701 - - - Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]
32. g2e3 ENSDARG00000001313 1485 1.419 - 0.715 - - - - 0.704 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
33. tuba1c ENSDARG00000055216 8384 1.417 - - - - 0.708 - - - 0.709 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
34. tmem194a tmem194a 745 1.415 - - - 0.715 - 0.700 - - -
35. mppe1 ENSDARG00000045416 340 1.409 - - - 0.703 - - 0.706 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
36. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 0.911 - - - - - - 0.911 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
37. b4galt6 ENSDARG00000010301 2005 0.89 - 0.890 - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
38. tle2c ENSDARG00000067832 367 0.888 - 0.888 - - - - - - - transducin like enhancer of split 2c [Source:ZFIN;Acc:ZDB-GENE-060512-84]
39. ZNF337_2 ZNF337_2 260 0.871 - - - - - - 0.871 - -
40. nsmce4a ENSDARG00000024311 125 0.869 - - - - - - 0.869 - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
41. HSPB11 ENSDARG00000002204 170 0.868 - 0.868 - - - - - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
42. srd5a1 ENSDARG00000020509 242 0.862 - - - - - - 0.862 - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
43. scly ENSDARG00000073813 578 0.858 - - - - - - 0.858 - - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
44. prkrira 971 0.855 - - - - - - 0.855 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
45. ciz1b ENSDARG00000089461 57 0.854 - - - - - - 0.854 - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
46. bora ENSDARG00000042688, ENSDARG00000112916 402 0.854 - - - - - - 0.854 - - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
47. exosc5 ENSDARG00000040557, ENSDARG00000113276 727 0.852 - 0.852 - - - - - - - exosome component 5 [Source:ZFIN;Acc:ZDB-GENE-060503-675]
48. CABZ01041962.1 ENSDARG00000076082 690 0.851 0.851 - - - - - - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
49. epn1 ENSDARG00000010411 725 0.848 - - - - - 0.848 - - - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
50. pde7a ENSDARG00000045305 545 0.848 - 0.848 - - - - - - - phosphodiesterase 7A [Source:ZFIN;Acc:ZDB-GENE-031222-10]
51. ttc27 ENSDARG00000007918 1228 0.843 - - - - - - 0.843 - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
52. si:dkey-263m6.1 si:dkey-263m6.1 140 0.838 - - - - - - 0.838 - -
53. pagr1 ENSDARG00000076966 1430 0.835 - - - - - 0.835 - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
54. fhl3a ENSDARG00000034643, ENSDARG00000110383 1178 0.835 - 0.835 - - - - - - - four and a half LIM domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4741]
55. larp1 ENSDARG00000101722 976 0.831 - - - - - - 0.831 - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
56. kcnab2b ENSDARG00000062134 80 0.829 - - - - - - 0.829 - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
57. xpo6 ENSDARG00000041217, ENSDARG00000112616 735 0.826 - - - - - 0.826 - - - exportin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5912]
58. ildr2 ENSDARG00000014180 791 0.826 - - - - - - 0.826 - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
59. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.825 - - - - - - 0.825 - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
60. nr1d4b ENSDARG00000059370 243 0.822 - - - - - - 0.822 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
61. BX927349.2 BX927349.2 325 0.822 - 0.822 - - - - - - -
62. CCNA2 ENSDARG00000011094 3996 0.821 - 0.821 - - - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
63. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.82 - - - - - - 0.820 - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
64. fam58a 423 0.819 - - - - - - 0.819 - - family with sequence similarity 58, member A, transcript variant X1
65. pskh1 ENSDARG00000056713, ENSDARG00000115380, ENSDARG00000115957 574 0.818 - - - - - - 0.818 - - protein serine kinase H1 [Source:ZFIN;Acc:ZDB-GENE-050119-1]
66. smfn ENSDARG00000009806 1280 0.815 - - - - - - 0.815 - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
67. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 0.814 - - - - - - 0.814 - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
68. C10H11orf30 C10H11orf30 1982 0.814 - 0.814 - - - - - - -
69. CU571169.5 CU571169.5 353 0.813 - - - - - - 0.813 - -
70. si:ch211-199g17.2 ENSDARG00000092310 243 0.812 - 0.812 - - - - - - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
71. slc29a1a ENSDARG00000101289 2074 0.812 - - - - 0.812 - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
72. sae1 ENSDARG00000010487 2028 0.812 - - - 0.812 - - - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
73. lace1a lace1a 561 0.812 0.812 - - - - - - - -
74. mtg2 ENSDARG00000063574 299 0.811 - - - - - - 0.811 - - mitochondrial ribosome-associated GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2209]
75. CEP192 CEP192 978 0.81 - - - - - - 0.810 - -
76. sec22a ENSDARG00000078328 1207 0.81 - - - - - - 0.810 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
77. bpgm ENSDARG00000070826 582 0.81 - - - - - - 0.810 - - 2,3-bisphosphoglycerate mutase [Source:ZFIN;Acc:ZDB-GENE-040718-375]
78. nktr ENSDARG00000059097 1998 0.81 - - - - - - 0.810 - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
79. znf451 ENSDARG00000076939 508 0.809 - 0.809 - - - - - - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
80. ttc12 ENSDARG00000056896 97 0.807 - - - - - - 0.807 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
81. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.807 - - - - - - 0.807 - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
82. cep63 ENSDARG00000056862 194 0.804 - 0.804 - - - - - - - centrosomal protein 63 [Source:ZFIN;Acc:ZDB-GENE-040426-1154]
83. DHRS13 DHRS13 218 0.804 - - - - - - 0.804 - -
84. MAD2L1BP ENSDARG00000104943 351 0.803 - 0.803 - - - - - - - MAD2L1 binding protein [Source:ZFIN;Acc:ZDB-GENE-161230-19]
85. TNPO2 ENSDARG00000042887 2290 0.803 - - - 0.803 - - - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
86. acrc 242 0.802 0.802 - - - - - - - - acidic repeat containing, transcript variant X3
87. mbtps2 ENSDARG00000057577 1285 0.801 - 0.801 - - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
88. ube2t ENSDARG00000063285 716 0.801 - - - - - - 0.801 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
89. si:ch211-152f6.6 si:ch211-152f6.6 278 0.8 0.800 - - - - - - - -
90. MMADHC ENSDARG00000005870 212 0.799 - - - - - - 0.799 - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
91. si:ch211-117c9.5 ENSDARG00000071235 154 0.799 0.799 - - - - - - - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
92. si:ch211-150o23.2 ENSDARG00000092746 788 0.798 - 0.798 - - - - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
93. zgc:110540 ENSDARG00000054929 2154 0.798 - 0.798 - - - - - - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
94. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 0.798 - 0.798 - - - - - - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
95. BX649282.1 ENSDARG00000105704 347 0.797 - 0.797 - - - - - - -
96. si:ch211-266d19.4 ENSDARG00000012642 1251 0.797 - 0.797 - - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
97. CABZ01113191.1 CABZ01113191.1 388 0.797 - 0.797 - - - - - - -
98. si:dkeyp-118b1.2 ENSDARG00000079131 705 0.796 - - - - - - 0.796 - - si:dkeyp-118b1.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7685]
99. rab12 ENSDARG00000089428 350 0.796 - 0.796 - - - - - - - RAB12, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-555]
100. rad1 ENSDARG00000040559 750 0.796 - - - - - - 0.796 - - RAD1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-1873]

There are 660 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA