Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trip11

Gene Name Gene ID Reads Annotation
trip11 ENSDARG00000078381 1763 thyroid hormone receptor interactor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-9833]










Genes with expression patterns similar to trip11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trip11 ENSDARG00000078381 1763 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor interactor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-9833]
2. hgs ENSDARG00000020960 3574 2.258 - 0.726 - - - 0.811 0.721 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
3. atp2b1a ENSDARG00000012684 4673 1.654 - - - - - 0.846 0.808 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
4. agpat4 ENSDARG00000069044 4487 1.618 - 0.835 - - - - 0.783 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
5. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.589 - - - - - 0.821 0.768 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
6. numb ENSDARG00000027279 2905 1.552 - 0.725 - - - 0.827 - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
7. ptplb ptplb 6135 1.541 - - - - - 0.721 0.820 - -
8. gata3 ENSDARG00000016526 1857 1.538 - - - - - 0.770 0.768 - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
9. asap2b ENSDARG00000019564 1660 1.534 - - - - - 0.783 0.751 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
10. slc30a1a ENSDARG00000005463 1011 1.532 - - - - - 0.700 0.832 - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
11. exoc5 ENSDARG00000060323 2450 1.509 - - - - - 0.763 0.746 - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
12. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.508 - 0.717 - - - 0.791 - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
13. sdc4 ENSDARG00000059906 10105 1.498 - 0.754 - - - - 0.744 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
14. fam171a1 ENSDARG00000079788 1445 1.479 - 0.759 - - - 0.720 - - - family with sequence similarity 171, member A1 [Source:ZFIN;Acc:ZDB-GENE-061208-1]
15. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.475 - 0.722 - - - - 0.753 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
16. cited4a ENSDARG00000035990 2762 1.446 - 0.704 - - - 0.742 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
17. hao2 ENSDARG00000027992, ENSDARG00000116498 615 1.437 - - - - - 0.709 0.728 - - hydroxyacid oxidase 2 (long chain) [Source:ZFIN;Acc:ZDB-GENE-040426-1239]
18. bsdc1 ENSDARG00000052623, ENSDARG00000116408 1987 1.425 - - - - - 0.711 0.714 - - BSD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040905-1]
19. psma6a ENSDARG00000019398 2702 0.917 - - - - - 0.917 - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
20. RALGAPB ENSDARG00000088899 1456 0.889 - - - - - 0.889 - - - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
21. atp6v1d ENSDARG00000011175 8331 0.883 - - - - - 0.883 - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
22. b2ml ENSDARG00000015887 1060 0.879 - - - - - 0.879 - - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
23. spryd3 ENSDARG00000101982 666 0.861 - - - - - 0.861 - - - SPRY domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-22]
24. ACVR1B ACVR1B 4824 0.857 - - - - - - 0.857 - -
25. mmadhc ENSDARG00000005870 1298 0.856 - - - - - 0.856 - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
26. ube2h ENSDARG00000000019 9900 0.855 - - - - - - 0.855 - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
27. plekha1 plekha1 1509 0.855 - - - - - 0.855 - - -
28. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 0.852 - - - - - 0.852 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
29. vgll4b ENSDARG00000103730 5266 0.848 - - - - - 0.848 - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
30. otub1b ENSDARG00000011462 4329 0.848 - - - - - 0.848 - - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
31. maea ENSDARG00000053691 1840 0.847 - - - - - 0.847 - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
32. apmap ENSDARG00000017422 2692 0.845 - - - - - 0.845 - - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
33. UGT8 ENSDARG00000037455, ENSDARG00000112659 645 0.839 - - - - - - 0.839 - - UDP glycosyltransferase 8 [Source:ZFIN;Acc:ZDB-GENE-060616-129]
34. qser1 ENSDARG00000074750 597 0.838 - - - - - 0.838 - - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
35. CABZ01044136.1 CABZ01044136.1 2596 0.838 - 0.838 - - - - - - -
36. osbpl9 ENSDARG00000069298 2730 0.836 - - - - - 0.836 - - - oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
37. shmt2 ENSDARG00000104414 4276 0.835 - - - - - 0.835 - - - serine hydroxymethyltransferase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-071213-1]
38. rabgef1 ENSDARG00000014430 1176 0.835 - - - - - - 0.835 - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
39. PAPD5 2090 0.834 - - - - - 0.834 - - - PAP associated domain containing 5, transcript variant X1
40. ube4b ENSDARG00000037017 8012 0.833 - - - - - 0.833 - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
41. COLGALT1 ENSDARG00000073974 5069 0.832 - - - - - 0.832 - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
42. PARP8 ENSDARG00000059789 264 0.832 - - - - - 0.832 - - - poly (ADP-ribose) polymerase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-060929-432]
43. cdca8 ENSDARG00000043137 7541 0.829 - - - - - 0.829 - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
44. dvl3a ENSDARG00000015707 1132 0.829 - - - - - 0.829 - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
45. cln3 ENSDARG00000037865 539 0.824 - - - - - 0.824 - - - ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]
46. mboat2a ENSDARG00000031845 1255 0.824 - 0.824 - - - - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
47. cdk2 ENSDARG00000026577 2835 0.824 - - - - - 0.824 - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
48. itpkca ENSDARG00000002994 710 0.823 - - - - - - 0.823 - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
49. trim71 ENSDARG00000075593 2750 0.822 - - - - - 0.822 - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
50. wnt5b ENSDARG00000102464 1662 0.822 - - - - - 0.822 - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
51. CLCN5 CLCN5 2731 0.821 - - - - - 0.821 - - -
52. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 0.819 - - - - - 0.819 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
53. abcc4 ENSDARG00000058953, ENSDARG00000115375 1990 0.818 - - - - - 0.818 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-511]
54. usp9 ENSDARG00000013708 9057 0.817 - - - - - 0.817 - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
55. PRPSAP1 ENSDARG00000099222 1249 0.816 - - - - - 0.816 - - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
56. ankrd9 ENSDARG00000028804 392 0.813 - - - - - 0.813 - - - ankyrin repeat domain 9 [Source:ZFIN;Acc:ZDB-GENE-041114-3]
57. CABZ01013938.1 CABZ01013938.1 4497 0.812 - - - - - 0.812 - - -
58. nr2f6b ENSDARG00000003165 5855 0.811 - - - - - 0.811 - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
59. RALGDS RALGDS 992 0.81 - - - - - 0.810 - - -
60. coro2a ENSDARG00000005210 1479 0.81 - - - - - 0.810 - - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
61. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 0.81 - - - - - 0.810 - - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
62. si:ch211-214j24.10 ENSDARG00000045847 5145 0.81 - - - - - 0.810 - - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
63. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 0.809 - - - - - - 0.809 - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
64. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.809 - - - - - 0.809 - - - coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
65. spint1a ENSDARG00000102332 1930 0.807 - - - - - - 0.807 - - serine peptidase inhibitor, Kunitz type 1 a [Source:ZFIN;Acc:ZDB-GENE-040426-2169]
66. si:ch211-42i9.4 si:ch211-42i9.4 1448 0.807 - 0.807 - - - - - - -
67. cask cask 3384 0.806 - - - - - 0.806 - - -
68. MCUR1 MCUR1 786 0.806 - - - - - 0.806 - - -
69. chmp1a ENSDARG00000102643 1078 0.805 - - - - - 0.805 - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
70. perp ENSDARG00000063572 6423 0.805 - - - - - - 0.805 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
71. zgc:85975 4738 0.804 - - - - - 0.804 - - - zgc:85975
72. PRODH_1 PRODH_1 3400 0.804 - - - - - 0.804 - - -
73. zbtb10 ENSDARG00000077101 8683 0.801 - - - - - 0.801 - - - zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
74. tmbim1 tmbim1 1005 0.801 - 0.801 - - - - - - -
75. SLC12A7 SLC12A7 1702 0.8 - - - - - 0.800 - - -
76. acbd3 ENSDARG00000042623 2643 0.8 - - - - - 0.800 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
77. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 0.8 - - - - - 0.800 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
78. erlin1 ENSDARG00000021991 5664 0.799 - - - - - 0.799 - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
79. ch1073-291c23.1 2426 0.798 - - - - - - 0.798 - - ch1073-291c23.1, transcript variant X6
80. cyfip1 ENSDARG00000044345 5483 0.798 - 0.798 - - - - - - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
81. col6a2 ENSDARG00000061436 5063 0.796 - - - - - - 0.796 - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
82. GABARAPL3 GABARAPL3 1198 0.795 - - - - - - 0.795 - -
83. fibpa ENSDARG00000016058 2148 0.795 - - - - - 0.795 - - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
84. ssh2b ENSDARG00000098955 614 0.794 - - - - - 0.794 - - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
85. CU469577.1 ENSDARG00000102850 1232 0.793 - - - - - 0.793 - - -
86. urah urah 4152 0.792 - - - - - 0.792 - - -
87. pof1b ENSDARG00000054060 2355 0.792 - - - - - 0.792 - - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
88. nckap1 ENSDARG00000060853 3540 0.792 - - - - - 0.792 - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
89. CABZ01092303.1 CABZ01092303.1 8825 0.792 - - - - - - 0.792 - -
90. ddah2 ENSDARG00000105009 4570 0.791 - - - - - 0.791 - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
91. ccrn4la ccrn4la 843 0.791 - - - - - 0.791 - - -
92. cyb5b ENSDARG00000099774 1224 0.79 - - - - - - 0.790 - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
93. tmem9b ENSDARG00000025693 2693 0.79 - - - - - 0.790 - - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
94. ptp4a2 ptp4a2 3196 0.79 - - - - - - 0.790 - -
95. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 0.789 - - - - - 0.789 - - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
96. esco2 ENSDARG00000014685 1971 0.789 - 0.789 - - - - - - - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
97. atp6ap1b ENSDARG00000037153 3970 0.789 - - - - - 0.789 - - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
98. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 0.788 - - - - - 0.788 - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
99. GRAMD4 GRAMD4 1967 0.788 - - - - - 0.788 - - -
100. EPS8L2 ENSDARG00000058108 484 0.788 - - - - - 0.788 - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]

There are 587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA