Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trio

Gene Name Gene ID Reads Annotation
trio trio 519










Genes with expression patterns similar to trio

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trio trio 519 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 1.659 - - - - 0.865 - 0.794 - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
3. DGKI 306 1.582 - - - - 0.792 - 0.790 - - diacylglycerol kinase, iota
4. sdcbp ENSDARG00000030097 196 1.578 - 0.791 - - 0.787 - - - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
5. METTL4 ENSDARG00000088999 160 1.531 0.713 0.818 - - - - - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
6. kifap3a ENSDARG00000008639 721 1.529 - 0.778 - - - - 0.751 - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
7. RECQL4 ENSDARG00000077516 462 1.518 - 0.741 - - - - 0.777 - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
8. mylka ENSDARG00000034801 133 1.505 - 0.717 - - - - 0.788 - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
9. nphs2 ENSDARG00000042850 31 1.5 - 0.725 - - - - 0.775 - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
10. TUBB2A TUBB2A 142 1.499 - - - - 0.798 - 0.701 - -
11. pdk4 ENSDARG00000054848 258 1.492 0.766 0.726 - - - - - - - pyruvate dehydrogenase kinase, isozyme 4 [Source:ZFIN;Acc:ZDB-GENE-060503-754]
12. znf148 ENSDARG00000055106 528 1.471 - - - - - 0.753 0.718 - - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
13. CABZ01086825.1 CABZ01086825.1 573 1.47 - - - - 0.763 - 0.707 - -
14. mfge8b ENSDARG00000045803, ENSDARG00000113171 568 1.466 - - - - 0.708 - 0.758 - - milk fat globule-EGF factor 8 protein b [Source:ZFIN;Acc:ZDB-GENE-070209-137]
15. mdm1 ENSDARG00000045675 64 0.919 - - - - 0.919 - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
16. C24H16orf11 C24H16orf11 32 0.919 - - - - 0.919 - - - -
17. TTBK1_1 TTBK1_1 132 0.919 - - - - 0.919 - - - -
18. gabpb1 ENSDARG00000023659 26 0.918 - - - - 0.918 - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
19. TRIM35_3 TRIM35_3 172 0.918 - - - - 0.918 - - - -
20. EPHB1 ENSDARG00000076757 20 0.917 - - - - 0.917 - - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
21. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 0.917 - - - - 0.917 - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
22. CU694372.1 ENSDARG00000097988 105 0.916 - - - - 0.916 - - - -
23. cpne5 cpne5 16 0.915 - - - - 0.915 - - - -
24. si:ch211-209p16.2 si:ch211-209p16.2 9 0.915 - - - - 0.915 - - - -
25. tmem79a ENSDARG00000071250 48 0.913 - - - - 0.913 - - - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
26. ABHD15 ABHD15 86 0.912 - 0.912 - - - - - - -
27. mtmr10 ENSDARG00000010601 37 0.91 - - - - 0.910 - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
28. CABZ01064968.2 CABZ01064968.2 20 0.91 - - - - 0.910 - - - -
29. mamdc1 mamdc1 156 0.909 - - - - 0.909 - - - -
30. ANKRD13D ENSDARG00000098140 88 0.909 - - - - 0.909 - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
31. plek2 ENSDARG00000012789 102 0.907 - - - - 0.907 - - - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
32. cacnb2a ENSDARG00000099045 374 0.905 - - - - 0.905 - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
33. SLC47A1_1 SLC47A1_1 130 0.904 - - - - 0.904 - - - -
34. ttc23 ENSDARG00000022160 101 0.902 - - - - 0.902 - - - - tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]
35. wu:fb63c12 26 0.902 - - - - 0.902 - - - - wu:fb63c12
36. fam169ab ENSDARG00000004177 232 0.9 - - - - - - 0.900 - - family with sequence similarity 169, member Ab [Source:ZFIN;Acc:ZDB-GENE-091118-95]
37. CR392330.1 ENSDARG00000086419 20 0.899 - - - - 0.899 - - - - si:ch211-282j17.13 [Source:NCBI gene;Acc:794438]
38. serpine3 ENSDARG00000057108 49 0.897 - - - - 0.897 - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
39. PPP1R16B ENSDARG00000079860 390 0.897 - 0.897 - - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
40. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.894 - - - - 0.894 - - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
41. fam167ab ENSDARG00000023952 354 0.894 - 0.894 - - - - - - - family with sequence similarity 167, member Ab [Source:ZFIN;Acc:ZDB-GENE-041014-11]
42. ctssb.2 ctssb.2 122 0.892 - - - - 0.892 - - - -
43. si:dkey-263m6.1 si:dkey-263m6.1 140 0.891 - - - - 0.891 - - - -
44. hcn2 hcn2 158 0.89 - 0.890 - - - - - - -
45. BX548000.1 ENSDARG00000099044 45 0.89 - - - - 0.890 - - - -
46. CT573263.1 ENSDARG00000112940 108 0.889 - - - - 0.889 - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
47. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.888 - 0.888 - - - - - - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
48. DNAH10 ENSDARG00000061486 29 0.887 - - - - 0.887 - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
49. si:ch211-165d12.4 ENSDARG00000079353 330 0.885 - 0.885 - - - - - - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
50. C7 C7 81 0.885 - - - - 0.885 - - - -
51. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 0.883 - 0.883 - - - - - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
52. ftr78 ftr78 273 0.883 0.883 - - - - - - - -
53. si:ch211-152p11.8 46 0.882 - - - - 0.882 - - - - si:ch211-152p11.8, transcript variant X2
54. ela2l ENSDARG00000056765, ENSDARG00000114256 31 0.881 - - - - 0.881 - - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
55. zgc:113691 ENSDARG00000038898 36 0.88 - - - - 0.880 - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
56. abhd5a 130 0.88 - 0.880 - - - - - - - abhydrolase domain containing 5a, transcript variant X1
57. itga9 ENSDARG00000032435 35 0.877 - - - - 0.877 - - - - integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
58. si:ch211-219a4.3 ENSDARG00000040445 120 0.876 - - - - 0.876 - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
59. MAPK8IP1 MAPK8IP1 121 0.874 - - - - 0.874 - - - -
60. si:dkey-163m14.2 274 0.873 - - - - 0.873 - - - - si:dkey-163m14.2
61. ilf3b ENSDARG00000105177 9473 0.871 - - - - - 0.871 - - - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
62. SH2B2 ENSDARG00000090421 245 0.871 - 0.871 - - - - - - - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
63. kif21a ENSDARG00000061131 913 0.87 - - - - - - 0.870 - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
64. MXRA5 MXRA5 58 0.87 - - - - 0.870 - - - -
65. AL840638.1 ENSDARG00000098608 104 0.867 - 0.867 - - - - - - -
66. rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 0.867 - - - - 0.867 - - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
67. nipa1 ENSDARG00000055917 132 0.865 - - - - 0.865 - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
68. znf704 ENSDARG00000061718, ENSDARG00000115892 160 0.864 - 0.864 - - - - - - - zinc finger protein 704 [Source:ZFIN;Acc:ZDB-GENE-060503-775]
69. CR354382.1 CR354382.1 42 0.862 - - - - 0.862 - - - -
70. lrrtm1 ENSDARG00000052713 1041 0.862 - - - - 0.862 - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
71. ZNF609 ZNF609 2176 0.859 - 0.859 - - - - - - -
72. U1_50 U1_50 62 0.859 - 0.859 - - - - - - -
73. TMEM138 ENSDARG00000090543 105 0.859 - 0.859 - - - - - - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
74. ACBD3 ENSDARG00000042623 159 0.857 - 0.857 - - - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
75. trim55b ENSDARG00000058158 586 0.857 - - - - - - 0.857 - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
76. CU571169.5 CU571169.5 353 0.855 - 0.855 - - - - - - -
77. rapgef3 ENSDARG00000079291 69 0.855 - - - - 0.855 - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
78. CHL1 CHL1 1553 0.854 - - - - 0.854 - - - -
79. plekhg7 ENSDARG00000062855 308 0.852 - - - - 0.852 - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
80. stard3nl ENSDARG00000045421 316 0.852 - - - - 0.852 - - - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
81. foxg1b ENSDARG00000032705 354 0.851 - - - - 0.851 - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
82. parpbp ENSDARG00000029944 316 0.851 - 0.851 - - - - - - - PARP1 binding protein [Source:ZFIN;Acc:ZDB-GENE-060421-5714]
83. rnf175 ENSDARG00000037647 1233 0.849 - 0.849 - - - - - - - ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
84. si:ch211-286m4.1 si:ch211-286m4.1 47 0.848 - 0.848 - - - - - - -
85. slc25a35 ENSDARG00000102783 129 0.848 - - - - 0.848 - - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
86. ZNF800 ZNF800 72 0.848 - 0.848 - - - - - - -
87. zgc:136493 ENSDARG00000029259 132 0.848 0.848 - - - - - - - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
88. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.847 - - - - - 0.847 - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
89. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 0.847 - - - - 0.847 - - - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
90. srcap ENSDARG00000005236 1740 0.846 - 0.846 - - - - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
91. csf1a ENSDARG00000075343 548 0.846 - 0.846 - - - - - - - colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]
92. gpr143 ENSDARG00000034572 559 0.844 - 0.844 - - - - - - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
93. clic5b_1 ENSDARG00000070584 149 0.844 - - - - 0.844 - - - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
94. COMMD6 ENSDARG00000074204 310 0.844 - - - - 0.844 - - - - COMM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-070912-209]
95. camsap1b ENSDARG00000035122 492 0.843 - 0.843 - - - - - - - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
96. apopt1 ENSDARG00000092473 682 0.843 - 0.843 - - - - - - - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
97. opa1_1 ENSDARG00000070801 1424 0.842 - - - - - - 0.842 - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
98. camkmt ENSDARG00000095224 1204 0.842 - 0.842 - - - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
99. ppa2 ENSDARG00000009685 209 0.842 - 0.842 - - - - - - - pyrophosphatase (inorganic) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1857]
100. ing4 ENSDARG00000030716 5908 0.841 - - - - - 0.841 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]

There are 810 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA