Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim9

Gene Name Gene ID Reads Annotation
trim9 ENSDARG00000039123 53 tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]










Genes with expression patterns similar to trim9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim9 ENSDARG00000039123 53 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
2. CSMD1 CSMD1 15 2.57 1.000 - 0.771 - - 0.799 - - -
3. LRRC4C ENSDARG00000113411 36 1.956 1.000 - - - - 0.956 - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
4. si:ch211-216b21.2 ENSDARG00000060253 54 1.917 1.000 - - - - 0.917 - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
5. FAXC FAXC 102 1.895 1.000 - - - - 0.895 - - -
6. dab1b ENSDARG00000003290 7 1.854 0.854 - - - - 1.000 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
7. si:dkey-228i19.32 si:dkey-228i19.32 9 1.83 1.000 - 0.830 - - - - - -
8. BX914198.1 BX914198.1 5 1.83 1.000 - 0.830 - - - - - -
9. CABZ01021454.2 CABZ01021454.2 3 1.83 1.000 - 0.830 - - - - - -
10. hivep3a ENSDARG00000075928 17 1.818 0.818 - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
11. nrg2b ENSDARG00000086585 100 1.808 0.915 - - - - 0.893 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
12. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.804 1.000 - - - - 0.804 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
13. COX5B ENSDARG00000015978 70 1.803 1.000 - - - - 0.803 - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
14. skor1a ENSDARG00000069030 19 1.799 - - 0.799 - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
15. CABZ01117437.1 CABZ01117437.1 11 1.792 0.945 - - - - 0.847 - - -
16. CRIP2 ENSDARG00000070670 323 1.782 0.955 - - - - 0.827 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
17. CABZ01029822.1 ENSDARG00000086931 1654 1.78 0.883 - - - - 0.897 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
18. BX957322.2 ENSDARG00000095302 68 1.743 0.802 - - - - 0.941 - - -
19. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.743 - - - - 0.894 - 0.849 - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
20. OSBPL1A ENSDARG00000105147 16 1.742 - - - - - 1.000 - - 0.742 oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
21. ZNF337_24 ZNF337_24 16 1.74 0.878 - 0.862 - - - - - -
22. kcnk9 ENSDARG00000104563 92 1.71 0.793 - - - - 0.917 - - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
23. pou4f2 ENSDARG00000069737 451 1.705 0.951 - - - - 0.754 - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
24. calb1 ENSDARG00000031598 252 1.688 0.852 - - - - - 0.836 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
25. diras1a ENSDARG00000028066 126 1.671 0.853 - - - - 0.818 - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
26. SGSM1_1 SGSM1_1 40 1.667 0.854 - - - - - 0.813 - -
27. scin ENSDARG00000010728, ENSDARG00000111092 437 1.664 0.752 - - - - - 0.912 - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
28. LRFN5_1 LRFN5_1 96 1.664 - - - - - 0.807 0.857 - -
29. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.652 0.939 - - - - - 0.713 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
30. elmod1 ENSDARG00000062056, ENSDARG00000113222 10 1.643 - - 0.796 - - 0.847 - - - ELMO/CED-12 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070112-262]
31. SMUG1 ENSDARG00000101308 236 1.619 - - - - - 0.758 0.861 - - single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9473]
32. ADAMTS2 ENSDARG00000075930 7 1.616 0.906 - - 0.710 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:ZFIN;Acc:ZDB-GENE-070816-3]
33. ATP6AP1L ATP6AP1L 164 1.588 0.848 - - - - 0.740 - - -
34. nptx1l ENSDARG00000074671 569 1.586 0.791 - - - - - 0.795 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
35. CABZ01089980.1 ENSDARG00000117446 16 1.581 - - 0.830 0.751 - - - - -
36. CR749741.2 CR749741.2 15 1.577 - - - - - 0.877 - - 0.700
37. SKOR2 SKOR2 1041 1.572 0.850 - - - - 0.722 - - -
38. penkb ENSDARG00000036045 304 1.564 0.768 - - - - - 0.796 - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
39. ADAM12 ENSDARG00000116062 35 1.556 - - - - - 0.847 0.709 - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
40. abcc8 ENSDARG00000051879, ENSDARG00000114458 18 1.554 - - 0.830 - - 0.724 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]
41. si:dkey-100n10.2 101 1.553 0.782 - - - - - 0.771 - - si:dkey-100n10.2
42. atpv0e2 ENSDARG00000059057 585 1.547 0.841 - - - - - 0.706 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
43. tbx16 ENSDARG00000007329 255 1.543 0.724 - - - - 0.819 - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
44. spock2 ENSDARG00000075393 791 1.539 0.835 - - - - - 0.704 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
45. slc1a3b ENSDARG00000043148 431 1.538 - - - - 0.717 0.821 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
46. nacad ENSDARG00000012347 1268 1.534 0.827 - - - - 0.707 - - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
47. zgc:162724 zgc:162724 9 1.521 0.802 - - - - - 0.719 - -
48. evx2 ENSDARG00000059255 317 1.517 0.802 - - - - 0.715 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
49. socs7_2 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 66 1.511 - - 0.742 - - 0.769 - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
50. NEFH NEFH 101 1.498 0.792 - - - - 0.706 - - -
51. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.448 - - - - - 0.738 0.710 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
52. si:dkey-10f21.4 ENSDARG00000057743 247 1.436 0.707 - - - - - 0.729 - - si:dkey-10f21.4 [Source:ZFIN;Acc:ZDB-GENE-070912-350]
53. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.43 0.702 - - - - 0.728 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
54. si:dkey-4c15.6 si:dkey-4c15.6 6 1 - - - - - 1.000 - - -
55. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
56. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
57. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
58. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
59. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
60. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - 1.000 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
61. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
62. kdm2ba ENSDARG00000036593 96 1 - - - - - 1.000 - - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
63. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
64. trpa1b ENSDARG00000031875 39 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
65. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
66. KCNJ3_1 KCNJ3_1 30 1 1.000 - - - - - - - -
67. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
68. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
69. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
70. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
71. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
72. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
73. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
74. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
75. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
76. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - 1.000 - - -
77. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
78. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
79. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - 1.000 - - -
80. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
81. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
82. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
83. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
84. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - - - - - 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
85. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
86. LPHN1_1 LPHN1_1 7 1 1.000 - - - - - - - -
87. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
88. FUT9 FUT9 91 1 1.000 - - - - - - - -
89. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 1.000 - - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
90. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
91. CABZ01063402.1 CABZ01063402.1 64 1 - - - - - 1.000 - - -
92. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
93. BX927362.1 ENSDARG00000097469 13 1 - - - - - 1.000 - - -
94. ptprc ENSDARG00000071437 104 1 1.000 - - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
95. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
96. MAST1 MAST1 29 1 1.000 - - - - - - - -
97. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
98. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1 1.000 - - - - - - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
99. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - 1.000 - - -
100. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]

There are 940 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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