Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim8b

Gene Name Gene ID Reads Annotation
trim8b ENSDARG00000060729, ENSDARG00000115043 1528 tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]










Genes with expression patterns similar to trim8b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
2. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 2.355 - - 0.721 - - 0.734 - 0.900 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
3. ankhd1 ENSDARG00000077860 5510 2.321 - - - - - - 0.776 0.718 0.827 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
4. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.841 - - 0.861 - - - - 0.980 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
5. CCDC167 ENSDARG00000045850 1024 1.804 - - 0.826 - - - - 0.978 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
6. pdcd10b ENSDARG00000012591 3395 1.801 - - - - - - - 0.958 0.843 programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
7. BX649554.3_1 BX649554.3_1 1071 1.752 - - 0.846 - - - - 0.906 -
8. csrp1a ENSDARG00000006603 5188 1.704 - 0.781 - - - - - 0.923 - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
9. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.701 - - - - - - 0.724 0.977 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
10. mdm4 ENSDARG00000057513 1954 1.697 - - 0.818 - - - - - 0.879 MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
11. cebpb ENSDARG00000042725 3921 1.696 - 0.751 - - - - - 0.945 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
12. st8sia2 ENSDARG00000018788 2183 1.663 - - - - - - - 0.961 0.702 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
13. igfbp1a ENSDARG00000099351 1717 1.657 - - - - - 0.708 - 0.949 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
14. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.652 - - 0.796 - - - - 0.856 -
15. zgc:56095 ENSDARG00000018461 3360 1.643 - - - - - - 0.727 0.916 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
16. atp6v1h ENSDARG00000006370 7028 1.643 - - - - - - 0.728 0.915 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
17. RBM6 ENSDARG00000077060 3521 1.618 - - - - - 0.731 - - 0.887 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
18. tmem214 ENSDARG00000016968 3772 1.615 - 0.837 0.778 - - - - - - transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
19. cdh1 ENSDARG00000102750 8654 1.602 - 0.753 - - - - - 0.849 - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
20. ssu72 ENSDARG00000031216 2350 1.59 - 0.824 0.766 - - - - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
21. rnf185 ENSDARG00000032997 1490 1.589 - - 0.852 - - - 0.737 - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
22. fzd2 ENSDARG00000054438 585 1.586 - - 0.851 - - - 0.735 - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
23. MAPRE2 ENSDARG00000099943 3041 1.585 - - - - - - 0.700 - 0.885 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
24. slc39a7 ENSDARG00000104451 6368 1.578 - - - - - - 0.725 0.853 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
25. C18H11orf58 C18H11orf58 1293 1.573 - - 0.851 - - - 0.722 - -
26. gstp1 ENSDARG00000104068 12698 1.571 - 0.755 - - - - - 0.816 - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
27. TNRC6B ENSDARG00000074161 2464 1.569 0.714 - 0.855 - - - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
28. rnf114 ENSDARG00000009886 725 1.569 - - 0.818 - - - 0.751 - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
29. cacybp ENSDARG00000014731 2650 1.562 - 0.709 0.853 - - - - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
30. CASK CASK 1750 1.546 - - 0.824 - - 0.722 - - -
31. col14a1a ENSDARG00000005762 4778 1.54 - 0.832 0.708 - - - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
32. etnk1 ENSDARG00000019420 2166 1.531 - 0.804 0.727 - - - - - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
33. stk24b ENSDARG00000023878 1054 1.528 - - 0.817 - - - 0.711 - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
34. fdps ENSDARG00000040890 4000 1.528 - 0.773 0.755 - - - - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
35. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.516 - - - - - - - 0.798 0.718 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
36. zgc:101000 zgc:101000 9041 1.515 - 0.741 - - - - - 0.774 -
37. ALDH1L2 ENSDARG00000070230 2550 1.512 - - - - - 0.718 - 0.794 - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
38. tnks tnks 1695 1.505 - - 0.775 - - - 0.730 - -
39. trrap ENSDARG00000100623 3429 1.497 - 0.774 0.723 - - - - - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
40. si:ch211-282j22.3 ENSDARG00000010524 1007 1.496 - 0.751 - - - - 0.745 - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
41. hmbox1a ENSDARG00000027082 2569 1.494 - 0.732 - - - - 0.762 - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
42. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.443 - - 0.705 - - - 0.738 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
43. irx3b ENSDARG00000031138 2538 1.431 - - - - - 0.722 - - 0.709 iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
44. C17H15orf57 C17H15orf57 1366 0.988 - - - - - - - 0.988 -
45. GGT7 ENSDARG00000115805 481 0.988 - - - - - - - 0.988 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
46. si:dkey-38p12.2 si:dkey-38p12.2 504 0.986 - - - - - - - 0.986 -
47. WDR77 2463 0.986 - - - - - - - 0.986 - WD repeat domain 77
48. cxxc1l cxxc1l 1035 0.986 - - - - - - - 0.986 -
49. prelid1b ENSDARG00000044169 501 0.985 - - - - - - - 0.985 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
50. si:dkey-3h3.3 ENSDARG00000067718 225 0.985 - - - - - - - 0.985 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
51. paxip1 ENSDARG00000005606 1417 0.985 - - - - - - - 0.985 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
52. vps4b ENSDARG00000069175 1922 0.984 - - - - - - - 0.984 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
53. TAF4 TAF4 658 0.984 - - - - - - - 0.984 -
54. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.983 - - - - - - - 0.983 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
55. slc30a9 ENSDARG00000057272 766 0.983 - - - - - - - 0.983 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
56. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.983 - - - - - - - 0.983 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
57. rdh12 ENSDARG00000018069 396 0.983 - - - - - - - 0.983 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
58. zgc:113019 ENSDARG00000099743 994 0.983 - - - - - - - 0.983 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
59. cnp ENSDARG00000070822 649 0.983 - - - - - - - 0.983 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
60. si:dkey-238o14.5 si:dkey-238o14.5 450 0.983 - - - - - - - 0.983 -
61. CABZ01073405.1 CABZ01073405.1 275 0.983 - - - - - - - 0.983 -
62. kmt2d ENSDARG00000037060 1232 0.983 - - - - - - - 0.983 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
63. PARP14 PARP14 164 0.982 - - - - - - - 0.982 -
64. ftr23 ENSDARG00000067985 254 0.982 - - - - - - - 0.982 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
65. PHLPP1 ENSDARG00000078694 2466 0.982 - - - - - - - 0.982 - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
66. golga4 ENSDARG00000075331 447 0.982 - - - - - - - 0.982 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
67. USP6 USP6 613 0.982 - - - - - - - 0.982 -
68. hsd17b4 ENSDARG00000101239 301 0.982 - - - - - - - 0.982 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
69. araf ENSDARG00000054533 1132 0.982 - - - - - - - 0.982 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
70. agk ENSDARG00000009837, ENSDARG00000113514 811 0.982 - - - - - - - 0.982 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
71. wscd2 ENSDARG00000061819 304 0.982 - - - - - - - 0.982 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
72. hcst ENSDARG00000092074 172 0.982 - - - - - - - 0.982 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
73. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.981 - - - - - - - 0.981 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
74. pir ENSDARG00000056638 722 0.981 - - - - - - - 0.981 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
75. smyd5 ENSDARG00000071669 1194 0.981 - - - - - - - 0.981 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
76. lamp1 1017 0.981 - - - - - - - 0.981 - lysosomal-associated membrane protein 1
77. nptx1l ENSDARG00000074671 569 0.981 - - - - - - - 0.981 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
78. scaf11 ENSDARG00000045885 3531 0.981 - - - - - - - 0.981 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
79. slc6a11a ENSDARG00000074002 189 0.981 - - - - - - - 0.981 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
80. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.98 - - - - - - - 0.980 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
81. C6H1orf159 C6H1orf159 406 0.98 - - - - - - - 0.980 -
82. fam96b 2255 0.98 - - - - - - - 0.980 - family with sequence similarity 96, member B
83. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.98 - - - - - - - 0.980 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
84. TUBGCP6 1991 0.979 - - - - - - - 0.979 - tubulin, gamma complex associated protein 6
85. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.979 - - - - - - - 0.979 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
86. RIN3 ENSDARG00000077618 745 0.978 - - - - - - - 0.978 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
87. RNF145 RNF145 1364 0.978 - - - - - - - 0.978 -
88. si:dkey-204f11.64 ENSDARG00000094695 586 0.978 - - - - - - - 0.978 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
89. sly1 sly1 2403 0.978 - - - - - - - 0.978 -
90. arpc5a ENSDARG00000039142 5482 0.978 - - - - - - - 0.978 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
91. ube2a ENSDARG00000098466 12765 0.977 - - - - - - - 0.977 - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
92. yy1b ENSDARG00000027978 2669 0.976 - - - - - - - 0.976 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
93. exoc7 ENSDARG00000087229 987 0.976 - - - - - - - 0.976 - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
94. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.976 - - - - - - - 0.976 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
95. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 0.976 - - - - - - - 0.976 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
96. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.976 - - - - - - - 0.976 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
97. gigfy2 3194 0.975 - - - - - - - 0.975 - GRB10 interacting GYF protein 2, transcript variant X1
98. znf292a ENSDARG00000016763 2253 0.974 - - - - - - - 0.974 - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
99. gpr146 ENSDARG00000059610 810 0.974 - - - - - - - 0.974 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
100. zgc:113443 359 0.973 - - - - - - - 0.973 - zgc:113443, transcript variant X3

There are 919 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA