Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim8a

Gene Name Gene ID Reads Annotation
trim8a ENSDARG00000090512 228 tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]










Genes with expression patterns similar to trim8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim8a ENSDARG00000090512 228 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]
2. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.644 - 0.786 - - - - 0.858 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
3. fam63a 381 1.572 - - - - - 0.840 0.732 - - family with sequence similarity 63, member A, transcript variant X1
4. mtx3 ENSDARG00000090195 42 1.552 - - - 0.792 - - 0.760 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
5. rin1a ENSDARG00000079095 99 1.526 - - - - - 0.724 0.802 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
6. sema3fa ENSDARG00000011163 759 1.523 - 0.808 - - - - 0.715 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
7. tecpr2 ENSDARG00000060835 491 1.52 - 0.763 0.757 - - - - - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
8. TRAK1 212 1.514 - 0.724 - - - 0.790 - - - trafficking protein, kinesin binding 1, transcript variant X6
9. CCDC108 CCDC108 74 1.506 - 0.793 - 0.713 - - - - -
10. BX548021.2_1 BX548021.2_1 164 1.488 - - 0.716 - - - 0.772 - -
11. pptc7a ENSDARG00000011122 739 1.466 - 0.705 - - - - 0.761 - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
12. si:dkey-3p4.8 ENSDARG00000114124 82 1.465 0.709 - - 0.756 - - - - - si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
13. dnajb6a ENSDARG00000004680 914 1.428 - - 0.726 0.702 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-45]
14. msxa msxa 263 1.424 - - - - - 0.711 0.713 - -
15. nr1h5 ENSDARG00000031046 92 0.948 - 0.948 - - - - - - - nuclear receptor subfamily 1, group H, member 5 [Source:ZFIN;Acc:ZDB-GENE-080403-3]
16. ppil6 ENSDARG00000042157 45 0.93 - 0.930 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
17. si:ch211-87m7.2 ENSDARG00000030129 223 0.922 - 0.922 - - - - - - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
18. cd151 ENSDARG00000038288 975 0.904 - - - - - - 0.904 - - CD151 molecule [Source:ZFIN;Acc:ZDB-GENE-041010-137]
19. CABZ01067868.1 CABZ01067868.1 235 0.901 - 0.901 - - - - - - -
20. tjap1 ENSDARG00000010681 457 0.89 - - - - - - 0.890 - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
21. RANBP2 ENSDARG00000093125 1854 0.889 - - - - - - 0.889 - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
22. hcn2 hcn2 158 0.885 - - - - - 0.885 - - -
23. msto1 ENSDARG00000024381 298 0.875 - - - - - 0.875 - - - misato 1, mitochondrial distribution and morphology regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6238]
24. si:ch211-14a17.10 ENSDARG00000076534 12 0.875 - 0.875 - - - - - - - si:ch211-14a17.10 [Source:ZFIN;Acc:ZDB-GENE-030616-581]
25. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.873 - - - - - 0.873 - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
26. fbn1 39 0.873 - - - 0.873 - - - - - fibrillin 1
27. TTBK2_1 TTBK2_1 649 0.872 - - - - - 0.872 - - -
28. BX004964.3 BX004964.3 87 0.872 - 0.872 - - - - - - -
29. cep57l1 ENSDARG00000002826 521 0.869 - - - - - - 0.869 - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
30. slc5a3a ENSDARG00000010376 134 0.868 - 0.868 - - - - - - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
31. PLCXD1_1 PLCXD1_1 317 0.865 - 0.865 - - - - - - -
32. bspry ENSDARG00000104875 63 0.864 - 0.864 - - - - - - - B-box and SPRY domain containing [Source:ZFIN;Acc:ZDB-GENE-060526-219]
33. si:ch211-56a11.2 ENSDARG00000093677 196 0.862 - - - - - - 0.862 - - si:ch211-56a11.2 [Source:ZFIN;Acc:ZDB-GENE-091204-123]
34. gtf2h3 ENSDARG00000067560 524 0.86 - - - - - 0.860 - - - general transcription factor IIH, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040718-302]
35. acbd5a ENSDARG00000034883 300 0.86 - 0.860 - - - - - - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
36. slc24a3 ENSDARG00000006760 418 0.859 - 0.859 - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
37. jmjd4 ENSDARG00000058995 199 0.858 0.858 - - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
38. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 0.855 - 0.855 - - - - - - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
39. si:ch211-255p10.3 ENSDARG00000096616 8336 0.853 - 0.853 - - - - - - - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
40. rhbdd1 ENSDARG00000021046 120 0.853 - - - - - 0.853 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
41. knop1 ENSDARG00000077721 2198 0.852 - - - - - - 0.852 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
42. gpr78 gpr78 135 0.851 - - - - - 0.851 - - -
43. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.85 - - - - - - 0.850 - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
44. si:ch211-208h1.1 si:ch211-208h1.1 262 0.849 - - - - - - 0.849 - -
45. CABZ01018247.1 CABZ01018247.1 609 0.849 - 0.849 - - - - - - -
46. si:ch73-103b9.2 ENSDARG00000092489 89 0.848 - - - - - 0.848 - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
47. zgc:171673 ENSDARG00000102473 256 0.848 - - - 0.848 - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
48. mtx1b ENSDARG00000036109 445 0.847 - - - - - - 0.847 - - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
49. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 0.847 - - - - - 0.847 - - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
50. KCNJ6 ENSDARG00000058985 71 0.846 - - - - - 0.846 - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
51. F7 ENSDARG00000034862 121 0.845 - 0.845 - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
52. osbpl10 osbpl10 836 0.844 - - - - - 0.844 - - -
53. ENSDARG00000023499 ENSDARG00000023499 395 0.843 - - - - - - 0.843 - -
54. DENND4B ENSDARG00000102914 1001 0.842 - - - - - - 0.842 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
55. rbfox3l rbfox3l 34 0.842 0.842 - - - - - - - -
56. CT025934.2 CT025934.2 22 0.842 - 0.842 - - - - - - -
57. plekhm2 ENSDARG00000078850 207 0.841 - - - - - - 0.841 - - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
58. celsr1b ENSDARG00000058259 1219 0.841 - 0.841 - - - - - - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
59. fhl3b ENSDARG00000104315 359 0.841 - 0.841 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
60. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.841 - - - - - - 0.841 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
61. thap3 ENSDARG00000041080, ENSDARG00000114392 220 0.841 - 0.841 - - - - - - - THAP domain containing, apoptosis associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-050327-4]
62. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 0.838 - - - - - 0.838 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
63. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 0.838 - - - - - - 0.838 - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
64. xrcc6 ENSDARG00000071551, ENSDARG00000111115, ENSDARG00000114945 724 0.837 - - - - - 0.837 - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6420]
65. fam151a ENSDARG00000058218 40 0.837 - - - - - 0.837 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
66. camkk1 camkk1 542 0.836 - - - - - - 0.836 - -
67. f3b ENSDARG00000005673 240 0.835 - - 0.835 - - - - - - coagulation factor IIIb [Source:ZFIN;Acc:ZDB-GENE-050417-234]
68. bcar3 ENSDARG00000016981 714 0.834 - - - - - 0.834 - - - BCAR3, NSP family adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080513-4]
69. CABZ01081148.1 CABZ01081148.1 789 0.834 - - - - - - 0.834 - -
70. lsm1 ENSDARG00000043177 767 0.833 - - - - - 0.833 - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
71. zgc:175107 ENSDARG00000075417 39 0.833 - 0.833 - - - - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
72. MTRF1 ENSDARG00000033579 107 0.833 0.833 - - - - - - - - mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
73. tmem101 ENSDARG00000114508 494 0.833 - - - - - - 0.833 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
74. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 0.832 - - - - - 0.832 - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
75. LRAT LRAT 12 0.832 - - - 0.832 - - - - -
76. SDR16C5 SDR16C5 34 0.831 - - - - - - 0.831 - -
77. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.831 - - - - - - 0.831 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
78. cacnb4b ENSDARG00000062174 159 0.831 - - - 0.831 - - - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
79. mical3b ENSDARG00000094732 179 0.831 - - - - - 0.831 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-050211-1]
80. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 0.828 - - - - - - 0.828 - - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
81. cstf2 ENSDARG00000090788 170 0.827 0.827 - - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
82. stard10 ENSDARG00000097718 1041 0.827 - - 0.827 - - - - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
83. efcab11 ENSDARG00000043740 178 0.827 - - - 0.827 - - - - - EF-hand calcium binding domain 11 [Source:ZFIN;Acc:ZDB-GENE-050417-348]
84. KLHL24 KLHL24 268 0.827 0.827 - - - - - - - -
85. habp2 ENSDARG00000057498 75 0.826 - - - - - - 0.826 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
86. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.825 - - - - - - 0.825 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
87. hhat ENSDARG00000074428 8 0.825 - - - 0.825 - - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
88. pkig ENSDARG00000086471 665 0.825 - - - - - - 0.825 - - protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Source:ZFIN;Acc:ZDB-GENE-050302-97]
89. ZMAT1 ZMAT1 219 0.825 - - - - - 0.825 - - -
90. FASTKD5 181 0.824 - 0.824 - - - - - - - FAST kinase domains 5
91. rbm17 ENSDARG00000031346 2079 0.824 - - - - - - 0.824 - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
92. lonp2 ENSDARG00000101438 179 0.824 0.824 - - - - - - - - lon peptidase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041212-1]
93. slc45a1 ENSDARG00000004302 152 0.824 - - - - - 0.824 - - - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
94. fgf8b ENSDARG00000039615 29 0.823 - - - 0.823 - - - - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
95. zgc:73226 ENSDARG00000023759 120 0.823 - - - 0.823 - - - - - zgc:73226 [Source:ZFIN;Acc:ZDB-GENE-050703-8]
96. slc35c1 ENSDARG00000104669 65 0.823 - - - 0.823 - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
97. 5S_rRNA 5S_rRNA 239 0.823 - - - - - 0.823 - - -
98. CT867948.2 CT867948.2 131 0.823 - - - - - - 0.823 - -
99. RBBP6_11 RBBP6_11 6 0.822 - - - 0.822 - - - - -
100. cbln12 ENSDARG00000068232 4 0.822 - - - 0.822 - - - - - cerebellin 12 [Source:ZFIN;Acc:ZDB-GENE-070912-11]

There are 755 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA