Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim55a

Gene Name Gene ID Reads Annotation
trim55a ENSDARG00000029596 2858 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]










Genes with expression patterns similar to trim55a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim55a ENSDARG00000029596 2858 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
2. chrna1 ENSDARG00000009021 2931 6.312 0.869 0.844 0.721 0.782 - 0.721 0.928 0.715 0.732 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
3. chrnd ENSDARG00000019342 2728 4.981 0.831 0.936 0.843 - - - 0.888 0.726 0.757 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
4. klhl41b ENSDARG00000006757 10762 4.834 0.817 - 0.810 - 0.724 0.788 0.941 - 0.754 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
5. nexn ENSDARG00000057317 10972 4.72 0.863 - 0.747 0.725 - 0.738 0.874 - 0.773 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
6. tnnt2d ENSDARG00000002988 7590 4.667 0.730 0.748 - 0.710 - 0.896 0.819 - 0.764 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
7. hhatla ENSDARG00000039051 6598 4.194 0.828 0.913 - - - - 0.943 0.772 0.738 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
8. txlnbb ENSDARG00000076241 6396 4.183 0.821 0.928 - - - 0.717 0.946 - 0.771 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
9. sptb ENSDARG00000030490 7128 4.136 0.833 0.894 - - - 0.812 0.891 - 0.706 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
10. sh3bgr ENSDARG00000021633 3498 4.128 0.870 0.886 - - - - 0.929 0.735 0.708 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
11. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.112 0.798 0.929 0.761 - - 0.741 0.883 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
12. casq1b ENSDARG00000018105 2643 4.065 0.797 0.828 - - - - 0.901 0.787 0.752 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
13. cacng1 cacng1 3118 4.036 0.773 0.905 0.723 - 0.739 - 0.896 - -
14. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.989 0.755 0.883 - 0.704 - - 0.853 - 0.794 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
15. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.777 0.759 - - - 0.700 0.713 0.832 - 0.773 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
16. trdn ENSDARG00000041779 4283 3.495 0.877 0.893 - - - 0.857 0.868 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
17. PTPLA PTPLA 4044 3.428 0.859 0.894 0.709 - - - 0.966 - -
18. xirp2a ENSDARG00000071113 7113 3.426 0.814 0.865 - - - 0.884 0.863 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
19. cap2 ENSDARG00000104478 3266 3.424 0.872 0.768 - - - 0.871 0.913 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
20. BX294434.1 ENSDARG00000061272 6493 3.406 0.860 0.898 - - - - 0.918 - 0.730 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
21. tnnc1b ENSDARG00000037539 13945 3.391 - 0.916 0.768 - - 0.879 0.828 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
22. znf106a ENSDARG00000016651 6049 3.367 0.837 0.907 - - - - 0.883 - 0.740 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
23. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.315 0.833 0.903 - 0.734 - - 0.845 - -
24. zgc:158296 ENSDARG00000070923 3935 3.307 - 0.866 0.763 - - - 0.935 - 0.743 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
25. srl ENSDARG00000104587 11126 3.297 0.787 0.919 - 0.704 - - 0.887 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
26. ryr3 ENSDARG00000071331 6795 3.29 0.785 0.898 - - - 0.733 0.874 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
27. myod1 ENSDARG00000030110 6019 3.283 0.768 0.875 - - - - 0.935 - 0.705 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
28. ntmt1 ENSDARG00000022399 5779 3.273 0.773 0.893 - - - - 0.871 - 0.736 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
29. prx ENSDARG00000017246 6183 3.267 0.836 0.828 - - - - 0.896 - 0.707 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
30. rp42-pen rp42-pen 3395 3.264 - 0.871 - 0.717 - 0.733 0.943 - -
31. DNAJA4 ENSDARG00000051762 5657 3.243 - 0.901 - - - 0.703 0.921 - 0.718 DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
32. vcl vcl 6667 3.228 0.781 0.924 0.759 - - - - - 0.764
33. si:ch211-156j16.1 ENSDARG00000092035 7441 3.208 0.857 - 0.702 - - - 0.917 - 0.732 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
34. AIMP1 ENSDARG00000060036 4136 3.207 0.840 0.913 0.708 - - - - - 0.746 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
35. alpk3a ENSDARG00000078989 1992 3.195 0.731 0.916 0.745 - - - 0.803 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
36. CU633479.5 ENSDARG00000114818 1815 3.188 0.779 0.839 - - - 0.706 0.864 - -
37. PTGES3L PTGES3L 4801 3.184 0.839 - - - - 0.721 0.905 - 0.719
38. MYOM1 MYOM1 3870 3.183 0.808 0.770 0.726 - - - 0.879 - -
39. TRIM63 TRIM63 1600 3.183 0.734 0.836 - - - 0.711 0.902 - -
40. smpx ENSDARG00000045302 2175 3.18 0.814 - - - - 0.715 0.864 - 0.787 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
41. smyd2b ENSDARG00000005629 8181 3.178 0.835 0.883 - - 0.719 0.741 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
42. CR847973.1 ENSDARG00000115516 8754 3.169 0.735 0.899 - - - 0.711 0.824 - -
43. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.166 0.715 - 0.768 - - - 0.930 - 0.753 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
44. eef2l2 ENSDARG00000035256 6815 3.151 0.854 0.830 - 0.714 - - 0.753 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
45. pygmb ENSDARG00000013317 5454 3.149 - 0.824 0.718 - - - 0.834 - 0.773 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
46. klhl31 ENSDARG00000039066 13656 3.146 - - 0.841 - 0.723 - 0.711 - 0.871 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
47. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.137 0.821 0.846 - - - 0.711 - - 0.759 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
48. smtnl1 ENSDARG00000041257 7410 3.13 0.837 - - - - 0.700 0.884 - 0.709 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
49. fgf6a ENSDARG00000009351 799 3.119 - 0.719 - - - 0.735 0.861 0.804 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
50. myhz2 ENSDARG00000012944 69921 3.105 0.789 - 0.735 - 0.710 - 0.871 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
51. tmem38a ENSDARG00000024047 41883 3.102 0.864 - 0.775 0.746 0.717 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
52. mdh1b ENSDARG00000018008 3196 3.1 0.749 - - 0.710 - - 0.928 - 0.713 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
53. myf6 ENSDARG00000029830 1911 3.088 0.770 0.715 - - - - 0.875 - 0.728 myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
54. gstm gstm 4064 3.075 0.843 0.780 - - - 0.726 0.726 - -
55. MYOM3 2720 3.009 0.739 0.803 - - - 0.710 0.757 - - myomesin 3, transcript variant X2
56. tmem161a ENSDARG00000012790 16094 3.006 0.794 - 0.719 - - - 0.702 - 0.791 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
57. NRAP ENSDARG00000009341 3565 2.614 0.815 0.861 - - - - 0.938 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
58. pygma ENSDARG00000055518 15972 2.602 0.814 0.912 - - - - 0.876 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
59. C13H10orf71 3489 2.594 0.799 0.914 - - - - 0.881 - - chromosome 13 C10orf71 homolog
60. limch1a ENSDARG00000074275 2981 2.593 0.810 0.869 - - - - 0.914 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
61. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.593 0.766 0.934 - - - - 0.893 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
62. TMPO TMPO 3264 2.589 0.817 0.870 - - - - 0.902 - -
63. jph2 ENSDARG00000028625 6706 2.554 - - - - - 0.848 0.936 - 0.770 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
64. apobec2a ENSDARG00000018881 4790 2.553 0.894 0.911 - - - - - - 0.748 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
65. cmya5 ENSDARG00000061379 1423 2.55 0.768 0.835 - - - - 0.947 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
66. ryr1b ENSDARG00000023797 5693 2.55 - 0.941 - - - - 0.895 - 0.714 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
67. stac3 ENSDARG00000098883 1765 2.55 0.836 0.891 - - - - 0.823 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
68. pbxip1a ENSDARG00000071015 4960 2.545 0.742 0.888 - - - - 0.915 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
69. ITGB1BP2 ENSDARG00000030176 2472 2.543 0.863 0.855 - - - - 0.825 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
70. hapln1a ENSDARG00000089769 12334 2.543 0.756 0.864 - - - - 0.923 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
71. klhl40a ENSDARG00000039052 2537 2.539 0.793 0.852 - - - - 0.894 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
72. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 2.537 - - - - - 0.881 0.881 - 0.775 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
73. gypc ENSDARG00000041546 1487 2.532 0.740 0.914 - - - - 0.878 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
74. mybpc2b ENSDARG00000021265 9618 2.531 0.771 0.892 - - - - 0.868 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
75. ndufs1 ENSDARG00000028546 5795 2.523 0.819 - - - - 0.884 0.820 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
76. usp28 ENSDARG00000008880 1850 2.515 0.776 0.902 - - - - 0.837 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
77. fitm1 ENSDARG00000056464 1759 2.505 0.795 0.849 - - - - 0.861 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
78. EHBP1L1 EHBP1L1 2500 2.493 0.743 0.841 - - - - 0.909 - -
79. pcmt ENSDARG00000015201 5132 2.491 - 0.815 - - - - 0.899 - 0.777 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
80. enpp1 ENSDARG00000005789 3267 2.488 0.762 - - - - 0.888 0.838 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
81. si:dkey-181m9.5 si:dkey-181m9.5 1079 2.485 0.828 - - - - 0.761 0.896 - -
82. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.483 0.812 - - 0.746 - - 0.925 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
83. murcb murcb 13655 2.481 0.837 - - 0.756 - - 0.888 - -
84. jph1a ENSDARG00000058603 2852 2.476 - 0.886 - - - 0.704 0.886 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
85. akap6 ENSDARG00000077295 1382 2.471 0.820 0.797 - - - - 0.854 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
86. adss ENSDARG00000002071 5497 2.462 0.819 - - - - - 0.895 0.748 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
87. MUSTN1 MUSTN1 1882 2.457 0.709 0.844 - - - - 0.904 - -
88. CU638714.1 ENSDARG00000100303 2132 2.456 0.820 0.805 - - - - 0.831 - -
89. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 2.45 - 0.776 - - - 0.787 0.887 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
90. alpk2 ENSDARG00000079637 1483 2.448 0.803 0.734 - - - - 0.911 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
91. zgc:92518 ENSDARG00000016343 3837 2.447 0.778 - - - - 0.725 0.944 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
92. asb5b ENSDARG00000053222 1207 2.447 0.759 0.851 - - - - 0.837 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
93. myoz2a ENSDARG00000012311 1373 2.447 0.703 0.858 - - - - 0.886 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
94. smyd1b ENSDARG00000091253 4964 2.445 0.871 0.827 - - - - - - 0.747 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
95. kcnma1a ENSDARG00000079840 2584 2.442 0.804 0.818 - - - - 0.820 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
96. bin1 bin1 3199 2.44 0.815 - - - - 0.785 0.840 - -
97. arpp21 ENSDARG00000061081 892 2.439 0.881 0.838 - - - - 0.720 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
98. FHOD3_1 FHOD3_1 983 2.426 0.795 0.827 - - - - 0.804 - -
99. cacna2d1a ENSDARG00000014804 1924 2.426 - 0.797 - - - - 0.891 - 0.738 calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
100. fbxl22 ENSDARG00000096995 1290 2.425 0.784 0.745 - - - - 0.896 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]

There are 1433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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