Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim47

Gene Name Gene ID Reads Annotation
trim47 ENSDARG00000056678 641 tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]










Genes with expression patterns similar to trim47

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim47 ENSDARG00000056678 641 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]
2. samd11 ENSDARG00000077852 631 2.445 - 0.920 - - - - - 0.807 0.718 sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
3. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 1.715 - - - - - - 0.778 0.937 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
4. TMEM87B ENSDARG00000112581 798 1.669 - - - - - - 0.746 0.923 - transmembrane protein 87B [Source:HGNC Symbol;Acc:HGNC:25913]
5. C16H8orf76 C16H8orf76 329 1.653 - - - 0.752 - - - 0.901 -
6. slain2 ENSDARG00000032114 798 1.627 - 0.727 - - - - - 0.900 - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
7. atp7a ENSDARG00000003699 476 1.621 - - - - - 0.716 - 0.905 - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
8. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.62 - - - - - - 0.768 0.852 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
9. slc35b1_1 ENSDARG00000038213 194 1.612 - - - - - - - 0.897 0.715 solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
10. pnp4a ENSDARG00000057575 355 1.61 0.706 - - - - - - 0.904 - purine nucleoside phosphorylase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-83]
11. stap2a ENSDARG00000092810 591 1.601 0.702 - - - - - - 0.899 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
12. CABZ01066772.1 CABZ01066772.1 299 1.589 - - 0.715 - - - - 0.874 -
13. fat3a ENSDARG00000033840 902 1.588 0.766 - - - - - - 0.822 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
14. si:dkey-30k6.5 ENSDARG00000057238 617 1.588 - - - - - - 0.732 0.856 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
15. CU462878.1 ENSDARG00000090072 352 1.585 - - - 0.741 - - - 0.844 - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
16. rbb4 rbb4 15541 1.578 - - - - - - 0.748 0.830 -
17. TMEM150A TMEM150A 975 1.578 0.755 - - - - - - 0.823 -
18. esco2 ENSDARG00000014685 1971 1.553 - - - - - - 0.794 0.759 - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
19. PAOX PAOX 251 1.549 - - - 0.781 - - 0.768 - -
20. cbx8b ENSDARG00000098771, ENSDARG00000110903, ENSDARG00000114315 455 1.515 - 0.776 - - - - - 0.739 - chromobox homolog 8b [Source:ZFIN;Acc:ZDB-GENE-050522-325]
21. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.506 - - - - - - 0.708 0.798 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
22. syt13 ENSDARG00000012306 298 1.505 - - - 0.742 - - 0.763 - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
23. zgc:162160 ENSDARG00000060259 117 1.484 0.736 0.748 - - - - - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
24. ppp2r2ba 321 1.478 0.773 - - 0.705 - - - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
25. hsd11b2 ENSDARG00000001975 245 1.475 - 0.710 - - - - - 0.765 - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
26. lrp12 ENSDARG00000098845 999 1.465 - 0.725 - - - - 0.740 - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
27. si:dkey-196j8.2 ENSDARG00000093874 55 1.453 0.715 0.738 - - - - - - - si:dkey-196j8.2 [Source:ZFIN;Acc:ZDB-GENE-081107-58]
28. rd3 ENSDARG00000031600 1085 1.447 0.733 - - - - - 0.714 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
29. dfna5 dfna5 361 1.44 - 0.717 - - - - - - 0.723
30. riok3 ENSDARG00000042751 3163 1.433 - - - - - - 0.703 0.730 - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
31. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.424 - - - - - - 0.717 0.707 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
32. gli2b ENSDARG00000020884 1468 1.422 - 0.715 - - - - 0.707 - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
33. wrb ENSDARG00000074271, ENSDARG00000110353 970 0.949 - 0.949 - - - - - - - tryptophan rich basic protein [Source:ZFIN;Acc:ZDB-GENE-030131-7696]
34. CABZ01066717.1 CABZ01066717.1 351 0.948 - - - - - - - 0.948 -
35. rb1 ENSDARG00000006782 1445 0.945 - - - - - - - 0.945 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
36. ZBTB26 ENSDARG00000028949 129 0.944 - - - - - - - 0.944 - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
37. BX322601.2 BX322601.2 297 0.942 - - - - - - - 0.942 -
38. si:ch73-127m5.1 ENSDARG00000060680 253 0.941 - - - - - - - 0.941 - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
39. topbp1 ENSDARG00000059322 241 0.939 - - - - - - - 0.939 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
40. dnttip2 ENSDARG00000057648 2381 0.939 - - - - - - - 0.939 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
41. smurf2 ENSDARG00000038067 2057 0.938 - - - - - - - 0.938 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
42. txndc11 ENSDARG00000101291 589 0.936 - - - - - - - 0.936 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
43. C5H9orf142 C5H9orf142 548 0.936 - - - - - - - 0.936 -
44. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 0.936 - - - - - - - 0.936 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
45. asap1a ENSDARG00000029463 1566 0.933 - - - - - - - 0.933 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
46. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 0.931 - - - - - - - 0.931 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
47. cep135 ENSDARG00000002991 164 0.931 - - - - - - - 0.931 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
48. ireb2 ENSDARG00000021466 699 0.93 - - - - - - - 0.930 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
49. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.93 - - - - - - - 0.930 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
50. WIZ WIZ 1188 0.929 - - - - - - - 0.929 -
51. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.929 - - - - - - - 0.929 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
52. XXYLT1 ENSDARG00000088799 193 0.929 - - - - - - - 0.929 - xyloside xylosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-120521-2]
53. znrd1 ENSDARG00000036070 684 0.928 - - - - - - - 0.928 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
54. si:ch211-67e16.4 ENSDARG00000086317 609 0.928 - - - - - - - 0.928 - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
55. mier1a ENSDARG00000041072 1690 0.928 - - - - - - - 0.928 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
56. znf148 ENSDARG00000055106 528 0.927 - - - - - - - 0.927 - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
57. CEP57 ENSDARG00000067668 345 0.927 - - - - - - - 0.927 - centrosomal protein 57 [Source:ZFIN;Acc:ZDB-GENE-070112-522]
58. zhx2 zhx2 365 0.927 - - - - - - - 0.927 -
59. cldn5a ENSDARG00000043716 3865 0.926 - - - - - - - 0.926 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
60. celsr1b ENSDARG00000058259 1219 0.925 - - - - - - - 0.925 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
61. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 0.924 - - - - - - - 0.924 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
62. ogfr ENSDARG00000037837 1001 0.923 - - - - - - - 0.923 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
63. CABZ01073174.1 CABZ01073174.1 581 0.921 - - - - - - - 0.921 -
64. CR387997.1 CR387997.1 190 0.92 - 0.920 - - - - - - -
65. E2F2 E2F2 871 0.92 - - - - - - - 0.920 -
66. fra10ac1 ENSDARG00000102615 425 0.92 - - - - - - - 0.920 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
67. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.919 - - - - - - - 0.919 - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
68. plxnb1b ENSDARG00000017211 4676 0.919 - - - - - - - 0.919 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
69. MAST1_1 MAST1_1 1595 0.919 - - - - - - - 0.919 -
70. e2f7 ENSDARG00000008986 1439 0.918 - - - - - - - 0.918 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
71. btr04 ENSDARG00000060962, ENSDARG00000095113 281 0.918 - - - - - - - 0.918 - bloodthirsty-related gene family, member 4 [Source:ZFIN;Acc:ZDB-GENE-060825-109]
72. gpr37l1a ENSDARG00000006079 422 0.916 - - - - - - - 0.916 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
73. si:dkey-12e7.1 ENSDARG00000069328, ENSDARG00000109272 239 0.916 - - - - - - - 0.916 - si:dkey-12e7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-173]
74. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.915 - - - - - - - 0.915 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
75. naa30 ENSDARG00000079686 814 0.915 - - - - - - - 0.915 - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
76. chsy3 ENSDARG00000069472 271 0.915 - - - - - - - 0.915 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
77. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.914 - - - - - - - 0.914 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
78. glipr1b ENSDARG00000030078 73 0.914 - - - - - - - 0.914 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
79. slco5a1 slco5a1 383 0.914 - - - - - - - 0.914 -
80. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.914 - - - - - - - 0.914 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
81. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.912 - 0.912 - - - - - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
82. NRD1 NRD1 3486 0.912 - - - - - - - 0.912 -
83. ankrd10a ENSDARG00000037100 375 0.911 - - - - - - - 0.911 - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
84. trps1 ENSDARG00000104082 918 0.911 - - - - - - - 0.911 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
85. LONRF2 LONRF2 721 0.911 - - - - - - - 0.911 -
86. zcchc10 ENSDARG00000091092 1333 0.91 - - - - - - - 0.910 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
87. grm4 ENSDARG00000040156 342 0.91 - 0.910 - - - - - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
88. pogza ENSDARG00000054778 1495 0.908 - - - - - - - 0.908 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
89. stard3nl ENSDARG00000045421 316 0.908 - - - - - - - 0.908 - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
90. C5H9orf16 C5H9orf16 743 0.908 - - - - - - - 0.908 -
91. sec22c ENSDARG00000063387 203 0.908 - - - - - - - 0.908 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
92. pcyt1ba ENSDARG00000058162 206 0.908 - - - - - - - 0.908 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
93. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 0.908 - - - - - - - 0.908 - BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
94. syt9a ENSDARG00000003994 298 0.907 - - - - - - - 0.907 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
95. ctnnal1 ENSDARG00000018162 747 0.907 - - - - - - - 0.907 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
96. me3 ENSDARG00000002305 3305 0.907 - - - - - - - 0.907 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
97. dna2 ENSDARG00000078759 846 0.907 - - - - - - - 0.907 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
98. CABZ01058048.1 CABZ01058048.1 268 0.907 - - - - - - - 0.907 -
99. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 0.907 - - - - - - - 0.907 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
100. bag5 ENSDARG00000017316 195 0.906 - - - - - - - 0.906 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]

There are 1215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA