Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim46b

Gene Name Gene ID Reads Annotation
trim46b ENSDARG00000058649 54 tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]










Genes with expression patterns similar to trim46b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim46b ENSDARG00000058649 54 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
2. TUBB2A TUBB2A 142 2.567 0.708 1.000 - - - - 0.859 - -
3. nkx1.2lb ENSDARG00000099427 220 2.529 0.715 0.881 - - - - 0.933 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
4. GJD2_1 GJD2_1 3045 2.525 0.747 1.000 - - - - 0.778 - -
5. dbx2 2971 2.468 0.734 0.781 - - - - 0.953 - - developing brain homeobox 2
6. rtn1b ENSDARG00000021143 1682 2.368 0.813 0.783 - - - - 0.772 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
7. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.333 0.708 0.763 - - - - 0.862 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
8. eef1a1a ENSDARG00000039502 234 2.311 - 0.881 - - - 0.709 0.721 - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
9. csf1b ENSDARG00000068263 248 2.302 0.757 0.714 - - - - 0.831 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
10. si:ch211-38m6.6 ENSDARG00000076959 12 2 - 1.000 - - - 1.000 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
11. si:ch211-138k19.2 si:ch211-138k19.2 398 1.944 - 1.000 - - - - 0.944 - -
12. neflb ENSDARG00000012426 298 1.94 - 1.000 - - - - 0.940 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
13. lingo1a ENSDARG00000034165 179 1.931 - 1.000 - - - - 0.931 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
14. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.929 - 1.000 - - - - 0.929 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
15. gfra3 ENSDARG00000087704 122 1.907 - 1.000 - - - 0.907 - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
16. gng3 ENSDARG00000009553 2530 1.898 - 0.929 - - - - 0.969 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
17. slc17a6b ENSDARG00000041150 823 1.88 - 1.000 - - - - 0.880 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
18. nfixa ENSDARG00000043226 14 1.877 - 1.000 - - - 0.877 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
19. si:dkey-200l5.4 ENSDARG00000095294 13 1.877 - 1.000 - - - 0.877 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
20. jph3 ENSDARG00000102204 175 1.874 - 1.000 - - - - 0.874 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
21. lhx1a ENSDARG00000014018 958 1.873 - 0.903 - - - - 0.970 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
22. SV2B SV2B 208 1.871 - 0.909 - - - - 0.962 - -
23. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.866 - 1.000 - - - - 0.866 - -
24. FUT9 FUT9 91 1.862 - 1.000 - - - - 0.862 - -
25. fam219ab ENSDARG00000013813 591 1.861 - 1.000 - - - - 0.861 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
26. MAP6 MAP6 643 1.857 - 0.927 - - - - 0.930 - -
27. scn2b ENSDARG00000101713 796 1.848 - 0.909 - - - - 0.939 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
28. sez6l2 ENSDARG00000076052 360 1.84 - 0.907 - - - - 0.933 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
29. NPPC ENSDARG00000068126 45 1.837 - 1.000 - - - 0.837 - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
30. st8sia1_1 ENSDARG00000098221 16 1.834 - 1.000 - - - - 0.834 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
31. gbx1 ENSDARG00000071418 871 1.834 - 0.909 - - - - 0.925 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
32. lrrc4bb ENSDARG00000014792 47 1.832 - 0.889 - - - 0.943 - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
33. NTRK3 NTRK3 163 1.825 - 1.000 - - - - 0.825 - -
34. slc17a6a ENSDARG00000001127 337 1.822 - 1.000 - - - - 0.822 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
35. amph ENSDARG00000007663 599 1.821 - 0.909 - - - - 0.912 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
36. CABZ01032454.1 CABZ01032454.1 7 1.815 - 0.815 - - - 1.000 - - -
37. zgc:162331 ENSDARG00000069607 13 1.815 - - - - - 0.857 0.958 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
38. rbfox3l rbfox3l 34 1.814 - 1.000 - - - - 0.814 - -
39. C10H5orf63 C10H5orf63 17 1.814 - 1.000 - - - - 0.814 - -
40. nebl ENSDARG00000021200 40 1.814 - 1.000 - - - - 0.814 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
41. CABZ01066439.2 CABZ01066439.2 5 1.814 - 1.000 - - - - 0.814 - -
42. tecrl2 tecrl2 11 1.814 - 1.000 - - - - 0.814 - -
43. fam163b ENSDARG00000073914 46 1.814 - 1.000 - - - - 0.814 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
44. CU184872.1 CU184872.1 15 1.814 - - - - - 1.000 0.814 - -
45. arl11l arl11l 31 1.814 - 1.000 - - - - 0.814 - -
46. her3 ENSDARG00000076857 131 1.814 - 1.000 - - - - 0.814 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
47. prdm14 ENSDARG00000045371 106 1.814 - 1.000 - - - - 0.814 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
48. si:dkey-122c11.4 si:dkey-122c11.4 13 1.814 - 1.000 - - - - 0.814 - -
49. CABZ01084273.1 CABZ01084273.1 16 1.814 - 1.000 - - - - 0.814 - -
50. KCNS3 KCNS3 82 1.805 - 1.000 - - - - 0.805 - -
51. cacng3b ENSDARG00000076401 91 1.805 - 1.000 - - - - 0.805 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
52. nrxn2a ENSDARG00000061454 291 1.797 - 0.881 - - - - 0.916 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
53. scrt2 ENSDARG00000056175 4331 1.786 - 0.895 - - - - 0.891 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
54. syt11a ENSDARG00000057913 1145 1.782 - 0.902 - - - - 0.880 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
55. HSPA4L ENSDARG00000053544 363 1.778 - 0.826 - - - - 0.952 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
56. rap2ip rap2ip 681 1.775 - 0.907 - - - - 0.868 - -
57. CELF3 CELF3 163 1.774 - 0.898 - - - 0.876 - - -
58. sox12 ENSDARG00000025847 681 1.773 0.773 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
59. sv2bb ENSDARG00000060711 196 1.772 - 0.822 - - - - 0.950 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
60. NPAS3 ENSDARG00000109820 362 1.766 0.766 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
61. stx1b ENSDARG00000000503 2724 1.765 - 0.814 - - - - 0.951 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
62. FAM196A 82 1.761 - 0.901 - - - - 0.860 - - family with sequence similarity 196 member A
63. CU570987.1 CU570987.1 7 1.761 - 1.000 0.761 - - - - - -
64. calb1 ENSDARG00000031598 252 1.758 - 1.000 - - - - 0.758 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
65. snap25a ENSDARG00000020609 4537 1.754 - 0.811 - - - - 0.943 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
66. fam69b ENSDARG00000117093 244 1.753 0.789 - - - - - 0.964 - - family with sequence similarity 69, member B [Source:ZFIN;Acc:ZDB-GENE-080721-1]
67. lrmp ENSDARG00000045574 26 1.751 - 0.907 - - - 0.844 - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
68. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.747 0.747 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
69. MAP1A MAP1A 847 1.744 - 0.811 - - - - 0.933 - -
70. GLRA3 ENSDARG00000011066 242 1.737 - 0.814 - - - - 0.923 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
71. elavl4 ENSDARG00000045639 998 1.736 0.750 - - - - - 0.986 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
72. ddx26b 79 1.736 - 1.000 - - - - 0.736 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
73. rbfox3 rbfox3 1443 1.735 - 0.833 - - - - 0.902 - -
74. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1.734 - 1.000 - - 0.734 - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
75. KCNAB2 KCNAB2 129 1.731 0.731 1.000 - - - - - - -
76. TRPC4_1 TRPC4_1 212 1.73 0.730 1.000 - - - - - - -
77. SLC5A7 SLC5A7 453 1.729 - - - - - 0.758 0.971 - -
78. tmem179 ENSDARG00000013292 343 1.728 - 0.946 - - - - 0.782 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
79. dclk1a ENSDARG00000018856 177 1.725 - - - - - 0.857 0.868 - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
80. nptx1l ENSDARG00000074671 569 1.721 - 0.918 - - - - 0.803 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
81. APBB3 ENSDARG00000053771 654 1.719 0.746 - - - - - 0.973 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
82. syt4 ENSDARG00000036505 421 1.719 - 0.815 - - - - 0.904 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
83. CT025910.1 CT025910.1 143 1.718 - 1.000 - - - - 0.718 - -
84. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.713 - 1.000 - - - - 0.713 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
85. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.71 0.734 - - - - - 0.976 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
86. entpd3 ENSDARG00000035309 263 1.709 - 0.895 - - - - 0.814 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
87. rgs7 rgs7 208 1.705 0.759 0.946 - - - - - - -
88. CDH7 16 1.704 - 0.704 - - - 1.000 - - - cadherin 7, type 2, transcript variant X1
89. slc1a2b ENSDARG00000102453 3136 1.704 - 0.829 - - - - 0.875 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
90. bhlhe22 ENSDARG00000058039 1673 1.701 0.709 - - - - - 0.992 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
91. penka ENSDARG00000004869 161 1.701 - 0.991 - - - - 0.710 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
92. pcsk1nl ENSDARG00000076170 1232 1.698 - 0.745 - - - - 0.953 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
93. NPPC_1 NPPC_1 11 1.695 - 0.881 - - - - 0.814 - -
94. ascl1a ENSDARG00000038386 1290 1.695 - - - - - 0.958 0.737 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
95. BTBD17 BTBD17 53 1.691 - - - - - 0.877 0.814 - -
96. CR936540.2 CR936540.2 4 1.691 - - - - - 0.877 0.814 - -
97. si:dkey-53f14.2 si:dkey-53f14.2 4 1.691 - - - - - 0.877 0.814 - -
98. ENTHD1 ENTHD1 235 1.691 - - - - - 0.865 0.826 - -
99. si:dkey-9i5.1 si:dkey-9i5.1 36 1.691 - - - - - 0.877 0.814 - -
100. neurod neurod 1189 1.689 - 0.816 - - - 0.873 - - -

There are 1741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA