Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim45

Gene Name Gene ID Reads Annotation
trim45 ENSDARG00000076781 578 tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]










Genes with expression patterns similar to trim45

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim45 ENSDARG00000076781 578 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
2. pus7 ENSDARG00000031774 195 1.595 - - - - - - 0.715 0.880 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
3. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1.591 - - - - 0.726 - - 0.865 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
4. mrpl20 ENSDARG00000090462 791 1.574 - - - - - - 0.728 0.846 - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
5. USP38 ENSDARG00000075798 285 1.567 - 0.728 - 0.839 - - - - - ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]
6. kcnj13 ENSDARG00000043443 700 1.566 - - - - - - 0.833 0.733 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
7. slc25a23a ENSDARG00000005690 824 1.545 - 0.757 - - - - - 0.788 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
8. tmem161b ENSDARG00000055989 680 1.542 - - - - - - 0.719 0.823 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
9. reep3l reep3l 608 1.541 - - - - - - 0.739 0.802 -
10. rhbdd2 ENSDARG00000092463 937 1.53 - - - 0.776 - - - 0.754 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
11. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 1.516 - 0.752 - - - - 0.764 - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
12. RSPH1 289 1.516 - - - - - - 0.808 0.708 - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
13. smad1 ENSDARG00000027199, ENSDARG00000112617, ENSDARG00000115674 2791 1.493 - 0.719 - 0.774 - - - - - SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]
14. tsc1a ENSDARG00000026048, ENSDARG00000113789, ENSDARG00000113892 439 1.48 - 0.724 - - - - 0.756 - - TSC complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9111]
15. eapp ENSDARG00000017272 404 1.467 - 0.738 - - - - - 0.729 - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
16. rpf2 ENSDARG00000043960 2719 1.465 - 0.717 - - - - - 0.748 - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
17. dnajc19 ENSDARG00000044420 1756 1.461 - 0.725 - - - 0.736 - - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
18. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.459 - - - - - - 0.737 0.722 - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
19. cdh5 ENSDARG00000075549 2288 1.413 - - - - - - 0.701 0.712 - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
20. MRPL52 ENSDARG00000090568 4402 1.411 - 0.701 - - - - 0.710 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
21. ppp1r11 ENSDARG00000036063 587 0.929 - - - - - - - 0.929 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
22. mhc1zba ENSDARG00000036588 761 0.906 - - - - - - - 0.906 - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
23. slc17a7 slc17a7 129 0.905 - - - - - - - 0.905 -
24. pon3 pon3 1146 0.895 - - - - - - - 0.895 -
25. znf593 ENSDARG00000044102, ENSDARG00000109934 2490 0.894 - - - - - - - 0.894 - zinc finger protein 593 [Source:ZFIN;Acc:ZDB-GENE-040426-1789]
26. zgc:109986 ENSDARG00000102608 348 0.893 - - - - - - - 0.893 - zgc:109986 [Source:ZFIN;Acc:ZDB-GENE-050522-136]
27. slc25a26 ENSDARG00000058208, ENSDARG00000110562, ENSDARG00000111558 584 0.891 - - - - - - - 0.891 - solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:ZFIN;Acc:ZDB-GENE-050913-126]
28. TTF1_4 TTF1_4 504 0.89 - - - - - - - 0.890 -
29. si:ch73-382f3.1 ENSDARG00000093833 295 0.888 - - - 0.888 - - - - - si:ch73-382f3.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9513]
30. CABZ01065679.1 ENSDARG00000098342 99 0.887 - - - 0.887 - - - - -
31. sap30l ENSDARG00000030213 5795 0.886 - - - - - - - 0.886 - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
32. smarcd2 ENSDARG00000088877 416 0.885 - - - - - - - 0.885 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
33. hspb9 ENSDARG00000078674 2755 0.884 - - - 0.884 - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
34. pde6b ENSDARG00000011671 44 0.883 - - - - - - - 0.883 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
35. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.883 - - - - - - - 0.883 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
36. si:ch73-167f18.3 si:ch73-167f18.3 78 0.883 - - - - - - - 0.883 -
37. IKZF4 ENSDARG00000037068 36 0.883 - - - - - - - 0.883 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
38. si:dkey-100h21.2 si:dkey-100h21.2 30 0.883 - - - - - - - 0.883 -
39. ILKAP ENSDARG00000040615 817 0.882 - - - 0.882 - - - - - integrin-linked kinase-associated serine/threonine phosphatase [Source:ZFIN;Acc:ZDB-GENE-070410-122]
40. spef2 ENSDARG00000098330 59 0.882 - - - - - - - 0.882 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
41. jam3a ENSDARG00000114589 630 0.882 - - - - - - - 0.882 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
42. TMEM150A TMEM150A 975 0.882 - - - 0.882 - - - - -
43. adcyap1a ENSDARG00000004015 67 0.882 - - - - - - - 0.882 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
44. ndufaf4 ENSDARG00000077859 552 0.881 - - - - - - - 0.881 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
45. ankdd1b ENSDARG00000025866 51 0.881 - - - - - - - 0.881 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
46. mir130b 180 0.881 - - - - - - - 0.881 - microRNA 130b
47. iqsec2 iqsec2 304 0.881 - - - - - - - 0.881 -
48. cish ENSDARG00000060316 329 0.881 - - - - - - 0.881 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
49. VDAC3 ENSDARG00000003695 34 0.88 - - - - - - - 0.880 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
50. CR954145.1 CR954145.1 327 0.88 - - - - - - - 0.880 -
51. si:dkey-157e10.7 si:dkey-157e10.7 105 0.88 - - - - - - - 0.880 -
52. hoxa4a 37 0.88 - - - - - - - 0.880 - homeobox A4a, transcript variant X4
53. GDPD4_1 GDPD4_1 190 0.879 - - - - - - - 0.879 -
54. tasp1 ENSDARG00000060580 453 0.879 - - - 0.879 - - - - - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
55. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.879 - - - - - - - 0.879 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
56. MAP7 MAP7 98 0.878 - - - - - - - 0.878 -
57. lysmd1 ENSDARG00000054789 277 0.877 - - - - - - - 0.877 - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
58. rpgra ENSDARG00000056617 77 0.876 - - - - - - - 0.876 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
59. ly75 ENSDARG00000053113 196 0.875 - - - - - - - 0.875 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
60. prkag3b ENSDARG00000000369 1945 0.874 - - - - - - - 0.874 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
61. CABZ01045230.1 CABZ01045230.1 158 0.873 - - - - - - - 0.873 -
62. KBTBD13_1 KBTBD13_1 116 0.873 - - - - - - - 0.873 -
63. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.873 - - - - - - - 0.873 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
64. BX005410.2 BX005410.2 44 0.872 - - - - - - - 0.872 -
65. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.872 - - - - - - - 0.872 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
66. BX511021.1 ENSDARG00000073936 647 0.872 - - - - - - - 0.872 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
67. mea1 ENSDARG00000039820 589 0.872 - - - - - - - 0.872 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
68. si:dkey-17e6.2 si:dkey-17e6.2 72 0.871 - - - - - - - 0.871 -
69. b3galtla b3galtla 111 0.871 - - - - - - - 0.871 -
70. ALPK1 195 0.871 - - - - - - - 0.871 - alpha-kinase 1
71. BX000430.1 ENSDARG00000112057 135 0.871 - - - - - - - 0.871 - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
72. tarsl2 ENSDARG00000092774 505 0.869 - - - - - - - 0.869 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
73. SHANK1 ENSDARG00000060539 102 0.869 - - - - - - - 0.869 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
74. arrdc2 ENSDARG00000020761 621 0.868 - - - - - - - 0.868 - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
75. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.868 - - - - - - - 0.868 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
76. rhogb ENSDARG00000004301 358 0.867 - - - - - - - 0.867 - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
77. commd1 ENSDARG00000031203 340 0.866 - - - - - - - 0.866 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
78. rwdd2b ENSDARG00000055426 294 0.865 - - - - - - - 0.865 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
79. CIT CIT 212 0.865 - - - - - - - 0.865 -
80. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.865 - - - - - - - 0.865 - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
81. pard3 pard3 161 0.865 - - - - - - - 0.865 -
82. slc6a6a ENSDARG00000012534 183 0.865 - - - - - - - 0.865 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
83. zgc:174877 ENSDARG00000079278 143 0.864 - - - - - - - 0.864 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
84. hn1a hn1a 115 0.864 - - - - - - - 0.864 -
85. zgc:174688 zgc:174688 170 0.864 - - - - - - - 0.864 -
86. nrxn2b ENSDARG00000063150 343 0.863 - - - - - - - 0.863 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
87. alg12 ENSDARG00000041199, ENSDARG00000111299 365 0.862 - - - - - - - 0.862 - ALG12, alpha-1,6-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-041210-295]
88. BCR ENSDARG00000079286 389 0.86 - - - - - - - 0.860 - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
89. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.86 - - - - - - - 0.860 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
90. adam9 ENSDARG00000010070 192 0.86 - - - - - - - 0.860 - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
91. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.859 - - - - - - - 0.859 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
92. si:dkey-253d23.2 ENSDARG00000071589 143 0.858 - - - - - - - 0.858 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
93. zgc:122979 ENSDARG00000004187 61 0.858 - - - - - - - 0.858 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
94. C20H1orf112 C20H1orf112 316 0.858 - - - - - - - 0.858 -
95. enosf1 ENSDARG00000038359 209 0.857 - - - - - - - 0.857 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
96. p2rx3b ENSDARG00000029718 105 0.857 - - - - - - - 0.857 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
97. aatkb ENSDARG00000104442 392 0.856 - - - - - - - 0.856 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
98. wdr20b_1 ENSDARG00000041239 212 0.856 - - - - - - 0.856 - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
99. adora1 adora1 149 0.856 - - - - - - - 0.856 -
100. nrp2b ENSDARG00000038446 783 0.855 - - - - - - - 0.855 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA