Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim44

Gene Name Gene ID Reads Annotation
trim44 ENSDARG00000051761 509 tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]










Genes with expression patterns similar to trim44

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim44 ENSDARG00000051761 509 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
2. SV2A ENSDARG00000059945 1278 2.434 - 0.723 - - - 0.991 - 0.720 - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
3. psmf1 ENSDARG00000022652 527 1.701 - 0.830 - - - - 0.871 - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
4. scn4ba ENSDARG00000099031 1634 1.664 - 0.891 - - - - 0.773 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
5. INA INA 950 1.663 - 0.909 - - - - 0.754 - -
6. rn7sk ENSDARG00000081270 149 1.639 - 0.872 0.767 - - - - - - RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
7. SNORD18_1 SNORD18_1 5 1.616 - 0.901 - - - - 0.715 - -
8. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.598 - 0.870 - - - - 0.728 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
9. nup214 ENSDARG00000016212 163 1.588 - 0.859 - - - - 0.729 - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
10. nt5c1ba ENSDARG00000018153 31 1.583 - 0.873 - - - - 0.710 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
11. sall3a ENSDARG00000079613 257 1.574 - 0.869 - - - - - 0.705 - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
12. SPAG5 SPAG5 1117 1.573 - 0.841 - - - - 0.732 - -
13. adam11 ENSDARG00000079204 298 1.562 - 0.848 - - - - 0.714 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
14. TMEM151A ENSDARG00000077986 78 1.562 - 0.851 - - - - 0.711 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
15. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.557 - 0.825 - - - - 0.732 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
16. tnk2a ENSDARG00000090646 133 1.552 - 0.841 - - - - - 0.711 - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
17. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.547 - 0.821 - - - - 0.726 - -
18. nbeaa ENSDARG00000070080 862 1.52 - 0.810 - - - - 0.710 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
19. FP102801.1_1 FP102801.1_1 238 1.52 - 0.813 - - - - 0.707 - -
20. RHOBTB1 ENSDARG00000079468 189 1.496 - 0.781 - - - - 0.715 - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
21. SHARPIN ENSDARG00000076995 235 1.467 - 0.759 - - - - 0.708 - - SHANK-associated RH domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-101223-1]
22. cdk5r1b ENSDARG00000045087 2075 1.461 - 0.729 - - - - 0.732 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
23. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.458 - 0.732 - - - - 0.726 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
24. hivep3a ENSDARG00000075928 17 1.416 - 0.701 - - - - 0.715 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
25. alkbh6 ENSDARG00000077253 117 1.416 - 0.714 - - - - - 0.702 - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
26. clip2 ENSDARG00000059596 529 1 - - - - - 1.000 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
27. amt ENSDARG00000010862, ENSDARG00000113280 367 1 - - - - - 1.000 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
28. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1 - - - - - 1.000 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
29. rbm42 ENSDARG00000039910 1111 0.999 - - - - - 0.999 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
30. mrpl41 ENSDARG00000002264 1756 0.999 - - - - - 0.999 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
31. cyb561a3a ENSDARG00000056281 667 0.999 - - - - - 0.999 - - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
32. si:dkey-3d4.3 ENSDARG00000074079 365 0.999 - - - - - 0.999 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
33. nog2 ENSDARG00000043066 233 0.999 - - - - - 0.999 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
34. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.999 - - - - - 0.999 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
35. zgc:112484 zgc:112484 780 0.999 - - - - - 0.999 - - -
36. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.999 - - - - - 0.999 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
37. rc3h1 rc3h1 1087 0.999 - - - - - 0.999 - - -
38. SLC6A16 SLC6A16 630 0.999 - - - - - 0.999 - - -
39. PRIM2 ENSDARG00000052721 825 0.999 - - - - - 0.999 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
40. TRIM35_3 TRIM35_3 172 0.999 - - - - - 0.999 - - -
41. mcts1 ENSDARG00000025972 4662 0.999 - - - - - 0.999 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
42. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - 0.999 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
43. zmynd8 ENSDARG00000007601 405 0.999 - - - - - 0.999 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
44. sec63 ENSDARG00000017740 3789 0.999 - - - - - 0.999 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
45. hdac9b ENSDARG00000056642 1148 0.999 - - - - - 0.999 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
46. pld2 ENSDARG00000034262 952 0.999 - - - - - 0.999 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
47. dfna5 dfna5 361 0.999 - - - - - 0.999 - - -
48. FP102157.1 FP102157.1 1096 0.999 - - - - - 0.999 - - -
49. eva1a ENSDARG00000061405 896 0.999 - - - - - 0.999 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
50. tdrd3 ENSDARG00000025421 633 0.999 - - - - - 0.999 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
51. vac14 ENSDARG00000014303 941 0.999 - - - - - 0.999 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
52. si:ch211-163l21.8 ENSDARG00000042899 724 0.999 - - - - - 0.999 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
53. pank2 ENSDARG00000003311 881 0.999 - - - - - 0.999 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
54. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.999 - - - - - 0.999 - - -
55. yes1 ENSDARG00000005941 3577 0.999 - - - - - 0.999 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
56. C9H2orf76 C9H2orf76 559 0.999 - - - - - 0.999 - - -
57. pbxip1b ENSDARG00000011824 3726 0.999 - - - - - 0.999 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
58. pgm2 ENSDARG00000018178 985 0.999 - - - - - 0.999 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
59. CASKIN2_1 CASKIN2_1 2299 0.999 - - - - - 0.999 - - -
60. zfyve21 ENSDARG00000027887 1687 0.998 - - - - - 0.998 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
61. tnni2b.2 ENSDARG00000029995 935 0.998 - - - - - 0.998 - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
62. tmem134 ENSDARG00000024828 3241 0.998 - - - - - 0.998 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
63. sf3b4 ENSDARG00000018574 7470 0.998 - - - - - 0.998 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
64. GPR108 ENSDARG00000096651 1734 0.998 - - - - - 0.998 - - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
65. yipf1 ENSDARG00000014474 542 0.998 - - - - - 0.998 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
66. VPS37C ENSDARG00000031836 906 0.998 - - - - - 0.998 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
67. creg2 ENSDARG00000000666 643 0.998 - - - - - 0.998 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
68. xirp1 ENSDARG00000030722 1486 0.998 - - - - - 0.998 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
69. lap3 ENSDARG00000061981 1188 0.998 - - - - - 0.998 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
70. mst4 mst4 1672 0.998 - - - - - 0.998 - - -
71. pes ENSDARG00000018902 3286 0.998 - - - - - 0.998 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
72. klhl41a ENSDARG00000068888 1034 0.998 - - - - - 0.998 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
73. triqk ENSDARG00000076296 1274 0.998 - - - - - 0.998 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
74. BRCC3 ENSDARG00000098242 1123 0.998 - - - - - 0.998 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
75. PLEKHG4 ENSDARG00000075964 2860 0.997 - - - - - 0.997 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
76. parn ENSDARG00000102634 2049 0.997 - - - - - 0.997 - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
77. sh3yl1 ENSDARG00000074393 815 0.997 - - - - - 0.997 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
78. FAR2 FAR2 1459 0.997 - - - - - 0.997 - - -
79. ppp2r2a ppp2r2a 5785 0.997 - - - - - 0.997 - - -
80. SMARCA1 ENSDARG00000012776 673 0.997 - - - - - 0.997 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
81. PROSER1 ENSDARG00000086302 1935 0.997 - - - - - 0.997 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
82. uggt1 ENSDARG00000054746 2060 0.997 - - - - - 0.997 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
83. stxbp3 ENSDARG00000008142 2604 0.996 - - - - - 0.996 - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
84. canx ENSDARG00000037488 4328 0.996 - - - - - 0.996 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
85. imp4 ENSDARG00000054540 1396 0.996 - - - - - 0.996 - - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
86. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.996 - - - - - 0.996 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
87. itpkb ENSDARG00000010059 2352 0.996 - - - - - 0.996 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
88. CREM CREM 1333 0.996 - - - - - 0.996 - - -
89. flot2b ENSDARG00000069774 2831 0.996 - - - - - 0.996 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
90. tcf7l1a ENSDARG00000038159 2288 0.996 - - - - - 0.996 - - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
91. ociad1 ENSDARG00000052334 2797 0.996 - - - - - 0.996 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
92. mpi ENSDARG00000030786 3052 0.995 - - - - - 0.995 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
93. ndufv2 ENSDARG00000013044 3758 0.995 - - - - - 0.995 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
94. rabgef1 ENSDARG00000014430 1176 0.995 - - - - - 0.995 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
95. zgc:63637 zgc:63637 3636 0.995 - - - - - 0.995 - - -
96. kdrl ENSDARG00000105215 766 0.995 - - - - - 0.995 - - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
97. zmat5 ENSDARG00000035434 983 0.995 - - - - - 0.995 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
98. c1qtnf4 ENSDARG00000024299 578 0.995 - - - - - 0.995 - - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
99. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 0.995 - - - - - 0.995 - - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
100. parp1 ENSDARG00000019529 6787 0.995 - - - - - 0.995 - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]

There are 1232 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA