Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim3b

Gene Name Gene ID Reads Annotation
trim3b ENSDARG00000005397 680 tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]










Genes with expression patterns similar to trim3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim3b ENSDARG00000005397 680 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
2. vangl2 ENSDARG00000027397 2418 2.415 0.708 - 0.966 - - - - - 0.741 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
3. fam92a1 ENSDARG00000004436 658 1.871 - - 0.989 - - - 0.882 - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
4. sh3rf1 ENSDARG00000070470 1463 1.852 - - 0.984 - - - 0.868 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
5. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.801 - - 0.996 - - 0.805 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
6. gfap ENSDARG00000025301 5584 1.775 0.794 - 0.981 - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
7. zgc:66472 ENSDARG00000075916 635 1.766 0.773 - 0.993 - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
8. arglu1b ENSDARG00000018319 1110 1.759 - - 0.982 - - 0.777 - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
9. fzr1 fzr1 2984 1.758 - - 0.985 - - 0.773 - - -
10. elmod2 ENSDARG00000101669 3101 1.747 - - 0.959 - - 0.788 - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
11. ELOVL4 ELOVL4 3026 1.742 0.747 - 0.995 - - - - - -
12. dsc2l ENSDARG00000039677 2747 1.732 - 0.760 0.972 - - - - - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
13. rfc1 ENSDARG00000054799 1416 1.717 - - 0.977 - - - 0.740 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
14. sgce ENSDARG00000012138 912 1.716 0.724 - 0.992 - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
15. coe2 coe2 1633 1.69 0.719 - 0.971 - - - - - -
16. mapk12b ENSDARG00000006409 2246 1.679 0.757 - 0.922 - - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
17. dlb ENSDARG00000004232 5120 1.669 0.764 - 0.905 - - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
18. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.66 - 0.740 0.920 - - - - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
19. efnb3b ENSDARG00000042277 5823 1.643 - - 0.941 - - 0.702 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
20. cldn5a ENSDARG00000043716 3865 1.625 0.771 - 0.854 - - - - - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
21. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.619 - - 0.902 - - 0.717 - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
22. CAMTA2 ENSDARG00000092799 1950 1.601 - 0.826 - - - 0.775 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
23. mybbp1a ENSDARG00000078214 2458 1.597 - - 0.880 - - - 0.717 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
24. fzd3a ENSDARG00000021664 1958 1.574 0.756 0.818 - - - - - - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
25. prr14 ENSDARG00000089232 495 1.571 - 0.770 - - - - 0.801 - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
26. CR848032.1 ENSDARG00000102710 338 1.57 - - - - - 0.743 0.827 - -
27. cbwd ENSDARG00000004318, ENSDARG00000111371 626 1.569 - 0.749 - - - - 0.820 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
28. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.555 0.739 - 0.816 - - - - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
29. kidins220b ENSDARG00000017338 1937 1.538 0.754 0.784 - - - - - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
30. smarcc1a ENSDARG00000017397 2957 1.522 - - - - - 0.772 0.750 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
31. elof1 ENSDARG00000099453 6176 1.517 0.722 - - - - 0.795 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
32. dopey1 438 1.506 0.758 0.748 - - - - - - - dopey family member 1, transcript variant X4
33. rab3ab ENSDARG00000043835 1267 1.505 0.706 0.799 - - - - - - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
34. fbxw11a ENSDARG00000104806 1815 1.502 - - - - - 0.706 0.796 - - F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
35. cntn3a.1 ENSDARG00000062880 156 1.501 - - - - - 0.793 0.708 - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
36. reep2 ENSDARG00000031382, ENSDARG00000112622 563 1.497 0.733 - - - - - 0.764 - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
37. khsrp ENSDARG00000026489 15738 1.494 0.749 - - - - 0.745 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
38. clvs2 ENSDARG00000053122 1390 1.492 0.781 - - - - - - 0.711 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
39. ccdc85ca ENSDARG00000005232 3218 1.489 0.710 - - - - 0.779 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
40. hoxa9b ENSDARG00000056819 3081 1.476 0.763 - - - - 0.713 - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
41. ccdc94 1417 1.472 - - - - - - 0.767 - 0.705 coiled-coil domain containing 94
42. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.455 - - 0.738 - - 0.717 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
43. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.454 0.734 - - - 0.720 - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
44. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.45 - 0.717 - - - - - 0.733 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
45. gpm6bb ENSDARG00000001676 2005 1.443 0.725 - - - - - 0.718 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
46. oser1 ENSDARG00000024669 676 1.415 - - - - - 0.713 0.702 - - oxidative stress responsive serine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1325]
47. C22H19orf44 C22H19orf44 481 0.997 - - 0.997 - - - - - -
48. si:ch211-59h6.1 ENSDARG00000013022 193 0.996 - - 0.996 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
49. cttnbp2nl cttnbp2nl 166 0.996 - - 0.996 - - - - - -
50. nckipsd ENSDARG00000079475 777 0.996 - - 0.996 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
51. ftr78 ftr78 273 0.996 - - 0.996 - - - - - -
52. scd ENSDARG00000033662 146 0.996 - - 0.996 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
53. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.996 - - 0.996 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
54. NUDT8 ENSDARG00000007722 329 0.996 - - 0.996 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
55. eda ENSDARG00000074591, ENSDARG00000113529 263 0.996 - - 0.996 - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
56. ZNF648 ENSDARG00000104823 194 0.996 - - 0.996 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
57. nsun2 ENSDARG00000056665 740 0.996 - - 0.996 - - - - - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
58. coro7 ENSDARG00000089616 2141 0.995 - - 0.995 - - - - - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
59. pcbp2 ENSDARG00000099039 4248 0.995 - - 0.995 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
60. syt11a ENSDARG00000057913 1145 0.995 - - 0.995 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
61. bmp7b ENSDARG00000063230 337 0.995 - - 0.995 - - - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
62. CABZ01112647.1 CABZ01112647.1 147 0.995 - - 0.995 - - - - - -
63. nbeal2 ENSDARG00000098641 1243 0.995 - - 0.995 - - - - - - neurobeachin-like 2 [Source:ZFIN;Acc:ZDB-GENE-100922-283]
64. nf1b ENSDARG00000004184 548 0.995 - - 0.995 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
65. srp19 ENSDARG00000035699 2624 0.995 - - 0.995 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
66. ercc2 ENSDARG00000021985 678 0.995 - - 0.995 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
67. atxn7l3 ENSDARG00000029331 531 0.995 - - 0.995 - - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
68. ISCA2 ENSDARG00000038154 489 0.994 - - 0.994 - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
69. g6pca.1 ENSDARG00000031616 401 0.994 - - 0.994 - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
70. ZPLXDC2 ZPLXDC2 1298 0.994 - - 0.994 - - - - - -
71. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 0.994 - - 0.994 - - - - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
72. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.994 - - 0.994 - - - - - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
73. CT027778.1 CT027778.1 265 0.994 - - 0.994 - - - - - -
74. med13b ENSDARG00000003910 1143 0.994 - - 0.994 - - - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
75. flr ENSDARG00000038024 562 0.994 - - 0.994 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
76. rmi1 ENSDARG00000041376 674 0.994 - - 0.994 - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
77. cplx2l ENSDARG00000018997 3975 0.994 - - 0.994 - - - - - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
78. trpc4apb ENSDARG00000020647 670 0.994 - - 0.994 - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
79. dtwd1 ENSDARG00000111509 347 0.994 - - 0.994 - - - - - - DTW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-23]
80. thbs3b ENSDARG00000012060 922 0.993 - - 0.993 - - - - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
81. dennd5a ENSDARG00000017006 3426 0.993 - - 0.993 - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
82. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.993 - - 0.993 - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
83. fam135a ENSDARG00000059843 2352 0.993 - - 0.993 - - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
84. TCAIM ENSDARG00000079881 424 0.993 - - 0.993 - - - - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
85. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.992 - - 0.992 - - - - - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
86. ORC2 ENSDARG00000101465 399 0.992 - - 0.992 - - - - - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
87. rxraa ENSDARG00000057737 750 0.992 - - 0.992 - - - - - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
88. psd3l ENSDARG00000104820 1201 0.992 - - 0.992 - - - - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
89. ube3c ENSDARG00000035978, ENSDARG00000112229 787 0.992 - - 0.992 - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
90. tmem30ab ENSDARG00000043555 1344 0.992 - - 0.992 - - - - - - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
91. sec22a ENSDARG00000078328 1207 0.992 - - 0.992 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
92. tyr ENSDARG00000039077 568 0.992 - - 0.992 - - - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
93. psen2 ENSDARG00000015540 832 0.992 - - 0.992 - - - - - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
94. pou3f2a ENSDARG00000070220 817 0.992 - - 0.992 - - - - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
95. tmem222a ENSDARG00000069589 1766 0.991 - - 0.991 - - - - - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
96. arl8bb ENSDARG00000070318 1428 0.991 - - 0.991 - - - - - - ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
97. bcl9 ENSDARG00000036687 1124 0.991 - - 0.991 - - - - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
98. taf1 ENSDARG00000035330 912 0.991 - - 0.991 - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
99. ARHGAP23 ARHGAP23 3946 0.991 - - 0.991 - - - - - -
100. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.991 - - 0.991 - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]

There are 1044 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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