Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim35-3_1

Gene Name Gene ID Reads Annotation
trim35-3_1 ENSDARG00000052255 6 tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]










Genes with expression patterns similar to trim35-3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-3_1 ENSDARG00000052255 6 5 - 1.000 1.000 - 1.000 1.000 1.000 - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
2. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1.95 - 1.000 0.950 - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
3. tnni3k ENSDARG00000086933 37 1.948 - 1.000 0.948 - - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
4. sebox ENSDARG00000042526 2 1.945 - 1.000 - - - - 0.945 - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
5. CR753817.1 ENSDARG00000110927 26 1.942 - 1.000 - - - - 0.942 - -
6. CABZ01049362.1 ENSDARG00000099508 570 1.856 - - - - 1.000 0.856 - - -
7. CU694952.2 CU694952.2 3 1.856 - 1.000 - - - 0.856 - - -
8. CU928220.1 CU928220.1 146 1.854 - 1.000 - - - - 0.854 - -
9. rprmb ENSDARG00000024006 120 1.801 - - - - - 0.856 0.945 - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
10. CABZ01054394.1 ENSDARG00000090942 12 1.796 - 1.000 - - - 0.796 - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
11. SLC15A5 ENSDARG00000089974 18 1.79 - 0.887 - - - - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
12. st6galnac1.1 ENSDARG00000043814 95 1.784 - 1.000 0.784 - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
13. il1rapl1b ENSDARG00000104853 52 1.772 - 1.000 - - - - 0.772 - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
14. agt ENSDARG00000016412 17 1.766 - 0.910 - - - 0.856 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
15. crfb12 ENSDARG00000052413 47 1.765 - - 0.903 - - - 0.862 - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
16. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.748 - - - - - 0.856 0.892 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
17. scara3 ENSDARG00000008060 169 1.74 - 1.000 - - - - 0.740 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
18. rnf217 ENSDARG00000060944 10 1.711 - 1.000 - - 0.711 - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
19. nanos3 ENSDARG00000068255 319 1.627 - 0.747 - - 0.880 - - - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
20. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1.621 - - - - - 0.856 0.765 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
21. MSLNL MSLNL 41 1.612 - - - - - 0.907 0.705 - -
22. C18H3orf33 ENSDARG00000040582 77 1.528 - - 0.739 - - 0.789 - - - c18h3orf33 homolog (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-061121-2]
23. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1.493 - 0.729 - - - - 0.764 - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
24. cftr ENSDARG00000041107, ENSDARG00000110312 56 1.49 - - - - - 0.702 0.788 - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
25. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
26. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
27. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
28. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
29. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - 1.000 - - - - - - -
30. runx2b ENSDARG00000059233 106 1 - - - - - - 1.000 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
31. ZNF337_16 ZNF337_16 22 1 - - - - - - 1.000 - -
32. prrt1 ENSDARG00000062208 368 1 - 1.000 - - - - - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
33. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
34. C24H8orf34 C24H8orf34 1 1 - 1.000 - - - - - - -
35. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
36. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
37. diaph2 ENSDARG00000076060 26 1 - - - - - - 1.000 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
38. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
39. zgc:172139 ENSDARG00000068830 10 1 - - - - - - 1.000 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
40. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
41. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
42. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
43. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
44. si:dkey-31m5.3 ENSDARG00000110121 1 1 - - - - - - 1.000 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
45. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
46. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
47. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
48. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
49. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
50. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
51. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
52. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - 1.000 - - - - - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
53. CABZ01112331.1 CABZ01112331.1 9 1 - 1.000 - - - - - - -
54. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
55. kcnn1a ENSDARG00000091306 95 1 - 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
56. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
57. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1 - 1.000 - - - - - - -
58. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
59. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
60. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
61. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
62. EVA1B EVA1B 22 1 - 1.000 - - - - - - -
63. DYNC1H1 ENSDARG00000014717 11 1 - 1.000 - - - - - - - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
64. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
65. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
66. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
67. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - - - - 1.000 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
68. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
69. CR848784.2 ENSDARG00000111157 16 1 - - - - - - 1.000 - -
70. zgc:113098 zgc:113098 22 1 - - - - - - 1.000 - -
71. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
72. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
73. CT573389.1 CT573389.1 26 1 - - - - - - 1.000 - -
74. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
75. vmhcl 119 1 - - - - - - 1.000 - - ventricular myosin heavy chain-like
76. si:dkeyp-46h3.2 ENSDARG00000092498 23 1 - - - - - - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
77. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
78. mpz ENSDARG00000038609 1740 1 - 1.000 - - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
79. adat3 ENSDARG00000005640 96 1 - - - - - - 1.000 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
80. taar19o ENSDARG00000093266, ENSDARG00000116999 1 1 - - - - - - 1.000 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
81. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
82. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
83. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
84. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
85. U11 U11 11 1 - 1.000 - - - - - - -
86. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
87. camk1db ENSDARG00000017446 47 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
88. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
89. CU467646.1 ENSDARG00000075090 27 1 - 1.000 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
90. TNFRSF14_1 TNFRSF14_1 165 1 - 1.000 - - - - - - -
91. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - 1.000 - - - - - - -
92. zfpm2a ENSDARG00000040123 46 1 - - - - - - 1.000 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
93. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
94. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
95. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
96. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
97. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - 1.000 - - - - - - -
98. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - 1.000 - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
99. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
100. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -

There are 784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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