Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-39

Gene Name Gene ID Reads Annotation
trim35-39 ENSDARG00000071241 464 tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]










Genes with expression patterns similar to trim35-39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-39 ENSDARG00000071241 464 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]
2. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 1.636 - - - - - - 0.763 0.873 - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
3. LSM5 ENSDARG00000071573 371 1.621 - 0.792 - - - - - 0.829 - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
4. par1 par1 564 1.6 - 0.868 - - - - - 0.732 -
5. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.6 0.705 - - - - - - 0.895 - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
6. mmp15a ENSDARG00000051962 932 1.582 - 0.835 - - - - - 0.747 - matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]
7. bcl3 ENSDARG00000087832 69 1.561 - - - - - - 0.744 0.817 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
8. BX897726.3 BX897726.3 220 1.547 - - - - - - 0.754 0.793 -
9. si:ch1073-174d20.2 ENSDARG00000079651 171 1.535 - 0.727 - - - - - 0.808 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
10. si:dkeyp-89h8.1 si:dkeyp-89h8.1 429 1.514 - 0.765 - - - 0.749 - - -
11. hax1 ENSDARG00000036764 617 1.508 - 0.767 - - - - - 0.741 - HCLS1 associated protein X-1 [Source:ZFIN;Acc:ZDB-GENE-040718-26]
12. echdc2 ENSDARG00000016607 719 1.496 - 0.724 - - - - - 0.772 - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
13. guf1 ENSDARG00000029088 231 0.911 - 0.911 - - - - - - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
14. mntb ENSDARG00000073988 1023 0.897 - 0.897 - - - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
15. MAL2 ENSDARG00000077637 152 0.896 - - - - - - - 0.896 - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
16. tbc1d10a tbc1d10a 462 0.891 - 0.891 - - - - - - -
17. pigu ENSDARG00000075530 348 0.89 - 0.890 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
18. si:ch211-255g12.9 si:ch211-255g12.9 78 0.887 - 0.887 - - - - - - -
19. mcm10 ENSDARG00000045815 196 0.887 - 0.887 - - - - - - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
20. CDH24 CDH24 325 0.886 - 0.886 - - - - - - -
21. BX465205.1 ENSDARG00000097139 64 0.886 - 0.886 - - - - - - -
22. rab34b ENSDARG00000010977 590 0.883 - - - - - - - 0.883 - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
23. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.883 - 0.883 - - - - - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
24. galt ENSDARG00000069543 473 0.882 - 0.882 - - - - - - - galactose-1-phosphate uridylyltransferase [Source:ZFIN;Acc:ZDB-GENE-070112-172]
25. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 0.878 - - - - - - - 0.878 - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
26. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 0.873 - 0.873 - - - - - - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
27. TPMT_1 TPMT_1 214 0.872 - - - - - - - 0.872 -
28. ppp2r5a ENSDARG00000027017 2397 0.869 - - - - - 0.869 - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
29. IGFALS ENSDARG00000037836 133 0.867 - 0.867 - - - - - - - insulin-like growth factor binding protein, acid labile subunit [Source:ZFIN;Acc:ZDB-GENE-061009-25]
30. senp3b ENSDARG00000056741 1296 0.866 - 0.866 - - - - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
31. FAM53C FAM53C 769 0.866 - 0.866 - - - - - - -
32. adoa ENSDARG00000042827 310 0.866 - 0.866 - - - - - - - 2-aminoethanethiol (cysteamine) dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-041212-62]
33. CABZ01073795.1 ENSDARG00000010729 52 0.865 - 0.865 - - - - - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
34. CR762480.1 ENSDARG00000099580 17 0.864 - 0.864 - - - - - - -
35. dhps ENSDARG00000003270 827 0.862 - 0.862 - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
36. vps72 1164 0.862 - 0.862 - - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
37. IRS2 IRS2 485 0.861 - - - - - - - 0.861 -
38. timeless ENSDARG00000078497 1114 0.861 - 0.861 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
39. CPNE8_1 CPNE8_1 140 0.861 - - - - - - - 0.861 -
40. PLEKHO2 ENSDARG00000016774 454 0.858 - - - - - - - 0.858 - pleckstrin homology domain containing, family O member 2 [Source:ZFIN;Acc:ZDB-GENE-120406-4]
41. kcnc1a ENSDARG00000051852 317 0.857 - - - - - - - 0.857 - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
42. usp8 ENSDARG00000063719 643 0.856 - - - - - - - 0.856 - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
43. mob3c ENSDARG00000043705 306 0.854 - - - - - - - 0.854 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
44. CU570681.1 CU570681.1 512 0.851 - 0.851 - - - - - - -
45. mast4 1164 0.85 - 0.850 - - - - - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
46. hbae1 14666 0.85 - 0.850 - - - - - - - hemoglobin, alpha embryonic 1
47. rhot1a ENSDARG00000099996 2059 0.849 - - - - - - - 0.849 - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
48. cog4 ENSDARG00000054264 785 0.849 - - - - - - - 0.849 - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
49. rbm14b ENSDARG00000103834 1597 0.849 - - - - - - - 0.849 - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
50. mknk1 ENSDARG00000018411 749 0.848 - 0.848 - - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
51. DIDO1 ENSDARG00000057940 312 0.848 - 0.848 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
52. cpsf3l 870 0.848 - 0.848 - - - - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X1
53. fgfbp1 fgfbp1 445 0.847 - 0.847 - - - - - - -
54. C1H9orf156 C1H9orf156 122 0.846 - 0.846 - - - - - - -
55. DOCK10 ENSDARG00000075327 150 0.845 - - - - - - - 0.845 - dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
56. med25 ENSDARG00000038005, ENSDARG00000115713 1305 0.844 - 0.844 - - - - - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
57. ARHGAP44 ENSDARG00000104549 91 0.844 - 0.844 - - - - - - - Rho GTPase activating protein 44 [Source:ZFIN;Acc:ZDB-GENE-120206-2]
58. si:dkey-119m17.2 509 0.843 - 0.843 - - - - - - - si:dkey-119m17.2, transcript variant X2
59. PTGIR ENSDARG00000038278 254 0.843 - - - - - - - 0.843 - prostaglandin I2 receptor [Source:ZFIN;Acc:ZDB-GENE-120511-1]
60. C25H12orf73 C25H12orf73 2031 0.841 - 0.841 - - - - - - -
61. THEM6_1 ENSDARG00000103914 469 0.841 - - - - - - - 0.841 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
62. chtf18 ENSDARG00000058480, ENSDARG00000111334 506 0.841 - 0.841 - - - - - - - CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]
63. si:ch1073-181h11.4 ENSDARG00000098347 86 0.84 - 0.840 - - - - - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
64. cnep1r1 ENSDARG00000036064 1440 0.839 - 0.839 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
65. pfkpb ENSDARG00000012801 223 0.839 - - - - - - 0.839 - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
66. nab2 ENSDARG00000078076 108 0.839 - 0.839 - - - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
67. ttc13 ENSDARG00000063242 1360 0.839 0.839 - - - - - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
68. ibtk ENSDARG00000074424 146 0.839 - 0.839 - - - - - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6246]
69. creg2 ENSDARG00000000666 643 0.838 - - - - - - - 0.838 - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
70. cep85l ENSDARG00000020777 1121 0.836 - 0.836 - - - - - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
71. ABCF3 ENSDARG00000089705 195 0.836 - 0.836 - - - - - - - ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
72. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 0.833 - 0.833 - - - - - - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
73. CCDC39 150 0.832 - - - - - - - 0.832 - coiled-coil domain containing 39
74. scaper ENSDARG00000023104 491 0.831 - - - - - - - 0.831 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
75. fem1c ENSDARG00000102147 336 0.83 - 0.830 - - - - - - - fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
76. znf592 ENSDARG00000060885 776 0.828 - 0.828 - - - - - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
77. lrriq1 ENSDARG00000093781 83 0.828 - - - - - - - 0.828 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
78. slc2a15b ENSDARG00000053269 899 0.827 - - - - - - - 0.827 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
79. ino80e ENSDARG00000022939, ENSDARG00000101892 216 0.827 - 0.827 - - - - - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
80. PELI3 ENSDARG00000087452, ENSDARG00000111338 166 0.827 - - - - - - 0.827 - - pellino E3 ubiquitin protein ligase family member 3 [Source:ZFIN;Acc:ZDB-GENE-110304-4]
81. GABRR1 ENSDARG00000043902 71 0.825 - - - - - - - 0.825 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
82. nostrin ENSDARG00000077866 85 0.825 - 0.825 - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
83. si:ch211-28p3.4 ENSDARG00000091009 280 0.825 - - - - - 0.825 - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
84. agpat9 agpat9 938 0.825 - 0.825 - - - - - - -
85. RHBDF1 RHBDF1 131 0.825 - - - - - - - 0.825 -
86. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.823 - - - - - - - 0.823 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
87. ba1 69 0.822 - - - - - - - 0.822 - ba1 globin
88. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 0.822 - 0.822 - - - - - - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
89. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.822 - - - - - - 0.822 - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
90. BX511006.2 BX511006.2 29 0.821 - - - - - - - 0.821 -
91. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.821 - - - - - - - 0.821 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
92. KIF21B ENSDARG00000009733 53 0.821 - - - - - - - 0.821 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
93. BX088524.2 ENSDARG00000103268 564 0.821 - - - - - - - 0.821 -
94. trmt5 ENSDARG00000069278 228 0.82 - - - - - - - 0.820 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
95. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.82 - - - - - - - 0.820 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
96. espl1 ENSDARG00000075354 818 0.82 - - - - - - - 0.820 - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
97. add3b ENSDARG00000056250, ENSDARG00000114699 119 0.82 - - - - - - 0.820 - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
98. nphp4 ENSDARG00000069014 77 0.82 - - - - - - - 0.820 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
99. tfpia ENSDARG00000034718 1257 0.819 - 0.819 - - - - - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
100. hcfc1b ENSDARG00000012519 3633 0.819 - 0.819 - - - - - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]

There are 676 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA