Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
7. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
8. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
9. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
10. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
11. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
12. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
13. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
14. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
15. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
16. CABZ01034126.1 CABZ01034126.1 2 1 - 1.000 - - - - - - -
17. CR382327.4 CR382327.4 143 1 - 1.000 - - - - - - -
18. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
19. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
20. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
21. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
22. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
23. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
24. cnnm4 cnnm4 2 1 - - 1.000 - - - - - -
25. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
26. LINS LINS 42 1 - 1.000 - - - - - - -
27. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
28. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
29. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
30. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
31. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
32. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
33. BIN1 BIN1 11 1 - - - - 1.000 - - - -
34. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
35. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
36. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
37. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
38. chp1 ENSDARG00000052859 34 1 - 1.000 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
39. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
40. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
41. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
42. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
43. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
44. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
45. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
46. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
47. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
48. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
49. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
50. CST7 CST7 22 1 - - - - 1.000 - - - -
51. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
52. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
53. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
54. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
55. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
56. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
57. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
58. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
59. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
60. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
61. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
62. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
63. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
64. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
65. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
66. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
67. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
68. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
69. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
70. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
71. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
72. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
73. F13A1 F13A1 1 1 - - - - 1.000 - - - -
74. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
75. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
76. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
77. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
78. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
79. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
80. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
81. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
82. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - 1.000 - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
83. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
84. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
85. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
86. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
87. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
88. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
89. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
90. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
91. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
92. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
93. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
94. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
95. U1_18 U1_18 0 1 - - - - 1.000 - - - -
96. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
97. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
98. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
99. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
100. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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