Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
7. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
8. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
9. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
10. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
11. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
12. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
13. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
14. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
15. zgc:92658 8 1 - - 1.000 - - - - - - zgc:92658
16. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
17. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
18. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
19. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
20. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
21. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
22. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
23. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
24. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - 1.000 - - - - - - si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
25. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
26. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
27. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
28. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
29. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
30. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
31. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
32. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
33. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
34. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
35. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
36. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
37. U1_18 U1_18 0 1 - - - - 1.000 - - - -
38. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
39. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
40. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
41. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
42. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
43. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
44. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
45. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
46. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
47. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
48. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
49. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
50. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - 1.000 - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
51. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
52. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
53. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
54. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
55. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
56. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
57. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
58. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
59. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
60. F13A1 F13A1 1 1 - - - - 1.000 - - - -
61. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
62. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
63. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
64. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
65. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
66. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
67. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
68. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
69. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
70. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
71. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
72. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
73. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
74. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
75. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
76. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
77. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
78. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
79. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
80. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
81. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
82. CST7 CST7 22 1 - - - - 1.000 - - - -
83. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
84. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
85. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
86. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
87. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
88. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
89. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
90. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
91. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
92. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
93. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
94. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
95. chp1 ENSDARG00000052859 34 1 - 1.000 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
96. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
97. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
98. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
99. BIN1 BIN1 11 1 - - - - 1.000 - - - -
100. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA