Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
7. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
8. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
9. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
10. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
12. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
13. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
14. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
15. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
16. ODF2 ODF2 6 1 - - - - 1.000 - - - -
17. zgc:92658 8 1 - - 1.000 - - - - - - zgc:92658
18. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
19. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
20. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
21. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
22. LINS LINS 42 1 - 1.000 - - - - - - -
23. GPC5 GPC5 11 1 - 1.000 - - - - - - -
24. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
25. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
26. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
27. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
28. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
29. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
30. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
31. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
32. F13A1 F13A1 1 1 - - - - 1.000 - - - -
33. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
34. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
35. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
36. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
37. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
38. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
39. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
40. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
41. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
42. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
43. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
44. wibg wibg 2 1 - - - - 1.000 - - - -
45. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
46. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
47. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
48. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
49. BX469912.1 ENSDARG00000110104 2 1 - - 1.000 - - - - - - zgc:174358 [Source:NCBI gene;Acc:100004662]
50. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
51. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
52. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
53. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
54. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
55. tnni2a.3 ENSDARG00000013752 15 1 - - 1.000 - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
56. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
57. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
58. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
59. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
60. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
61. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
62. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
63. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
64. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
65. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
66. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
67. LECT2 LECT2 4 1 - 1.000 - - - - - - -
68. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
69. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
70. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
71. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
72. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
73. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
74. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
75. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - 1.000 - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
76. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
77. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
78. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
79. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
80. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
81. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
82. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
83. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
84. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
85. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
86. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
87. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
88. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
89. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
90. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
91. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
92. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
93. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
94. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
95. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
96. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
97. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
98. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
99. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
100. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA