Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
7. si:dkeyp-86f5.1 si:dkeyp-86f5.1 2 1 - - 1.000 - - - - - -
8. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
9. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
10. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
11. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
12. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
13. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
14. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
15. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
16. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
17. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
18. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
19. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
20. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
21. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
22. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
23. SLC13A5 SLC13A5 31 1 - - 1.000 - - - - - -
24. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
25. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
26. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
27. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
28. LECT2 LECT2 4 1 - 1.000 - - - - - - -
29. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
30. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
31. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
32. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
33. ODF2 ODF2 6 1 - - - - 1.000 - - - -
34. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
35. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
36. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
37. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
38. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
39. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
40. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
41. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
42. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
43. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
44. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
45. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
46. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
47. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
48. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
49. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
50. abcc13 ENSDARG00000062519 2 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
51. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
52. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
53. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
54. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
55. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
56. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
57. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
58. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
59. U1_15 U1_15 1 1 - - - - 1.000 - - - -
60. U8 U8 11 1 - - - - 1.000 - - - -
61. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
62. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
63. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
64. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
65. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
66. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
67. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
68. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
69. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
70. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
71. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
72. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
73. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
74. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
75. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
76. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
77. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
78. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
79. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
80. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
81. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
82. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
83. MOB2 MOB2 4 1 - - - - 1.000 - - - -
84. BX469912.1 ENSDARG00000110104 2 1 - - 1.000 - - - - - - zgc:174358 [Source:NCBI gene;Acc:100004662]
85. wibg wibg 2 1 - - - - 1.000 - - - -
86. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
87. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
88. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
89. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
90. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
91. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
92. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
93. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
94. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
95. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
96. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
97. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
98. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
99. GPC5 GPC5 11 1 - 1.000 - - - - - - -
100. tnni2a.3 ENSDARG00000013752 15 1 - - 1.000 - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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