Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
7. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
8. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
9. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
10. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
11. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
12. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
13. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
14. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
15. U8 U8 11 1 - - - - 1.000 - - - -
16. cnnm4 cnnm4 2 1 - - 1.000 - - - - - -
17. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
18. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
19. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
20. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
21. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
22. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
23. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
24. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
25. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
26. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
27. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
28. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
29. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
30. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
31. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
32. CST7 CST7 22 1 - - - - 1.000 - - - -
33. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
34. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
35. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
36. BIN1 BIN1 11 1 - - - - 1.000 - - - -
37. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
38. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
39. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
40. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
41. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
42. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
43. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
44. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
45. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
46. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
47. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
48. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
49. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
50. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
51. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
52. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
53. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
54. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
55. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
56. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
57. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
58. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
59. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
60. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
61. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
62. U1_15 U1_15 1 1 - - - - 1.000 - - - -
63. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
64. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
65. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
66. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
67. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
68. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
69. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
70. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
71. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
72. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
73. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
74. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
75. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
76. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
77. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
78. U1_18 U1_18 0 1 - - - - 1.000 - - - -
79. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
80. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
81. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
82. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
83. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
84. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
85. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
86. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
87. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
88. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - 1.000 - - - - - - si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
89. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
90. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
91. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
92. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
93. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
94. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
95. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
96. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
97. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
98. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
99. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
100. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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