Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-28

Gene Name Gene ID Reads Annotation
trim35-28 ENSDARG00000021021 1380 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]










Genes with expression patterns similar to trim35-28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-28 ENSDARG00000021021 1380 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
2. b3gnt2l ENSDARG00000068219 1875 2.313 - 0.804 - - - 0.733 - - 0.776 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
3. frem2b ENSDARG00000102626 1416 1.75 - - - - - - 0.880 - 0.870 Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
4. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.719 - - - - - - 0.813 - 0.906 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
5. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.716 - 0.800 - - - - - - 0.916 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
6. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.716 - - - 0.770 - - - - 0.946 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
7. tacc1 ENSDARG00000073753 1127 1.699 - - - - - - 0.750 - 0.949 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
8. WIPF2 WIPF2 3171 1.688 - - - - - 0.865 0.823 - -
9. ppp6r2b ENSDARG00000069654 323 1.688 - - - - - 0.746 - - 0.942 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
10. itpkb ENSDARG00000010059 2352 1.683 - - - - - - 0.779 - 0.904 inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
11. vcana ENSDARG00000103515 611 1.683 - - 0.743 - - - - - 0.940 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
12. id3 ENSDARG00000054823 3484 1.68 - - - - - - 0.783 - 0.897 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
13. sh3yl1 ENSDARG00000074393 815 1.679 - 0.736 - - - - - - 0.943 SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
14. CABZ01088509.1 CABZ01088509.1 1213 1.67 - 0.723 - - - - - - 0.947
15. nme3 ENSDARG00000100990 3889 1.665 - - - - - - 0.791 - 0.874 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
16. CT573389.2 CT573389.2 1183 1.661 - - - - - 0.729 - - 0.932
17. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.661 0.717 - - - - - - - 0.944 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
18. dhrs3b ENSDARG00000044803 2931 1.657 - - - - - 0.726 - - 0.931 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
19. ZDHHC3 ZDHHC3 1208 1.653 - - - - - - 0.714 - 0.939
20. tecra ENSDARG00000101585 609 1.64 - - - 0.850 - - 0.790 - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
21. gna12a ENSDARG00000025826 1769 1.635 - - - - - - 0.720 - 0.915 guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
22. cxcr4a ENSDARG00000057633 1829 1.629 - - - - - - 0.725 - 0.904 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
23. gna13b ENSDARG00000037924 1963 1.628 - - - - - 0.719 - - 0.909 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
24. CPAMD8 ENSDARG00000056530 3481 1.618 - - - - - 0.703 - - 0.915 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
25. arhgap5 ENSDARG00000061294 2228 1.611 - - - - - 0.713 - - 0.898 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
26. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.611 - - - - - 0.712 - - 0.899 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
27. JTB ENSDARG00000070150 135 1.598 0.794 - - 0.804 - - - - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
28. si:ch211-226m16.2 ENSDARG00000036785 2163 1.598 - - - - - 0.829 0.769 - - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
29. ogn 5002 1.598 - - - - - 0.708 - - 0.890 osteoglycin
30. gdap2 ENSDARG00000021569 1013 1.597 - - - 0.730 - - 0.867 - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
31. FBLIM1 ENSDARG00000071558 1793 1.587 - 0.875 - - - - 0.712 - - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
32. gsto2 ENSDARG00000033285 583 1.583 - - - - - 0.782 - 0.801 - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
33. si:ch211-105c13.3 ENSDARG00000089441 13973 1.582 - 0.800 - - - - 0.782 - - si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
34. bambia ENSDARG00000055381 2922 1.576 0.854 - - - - 0.722 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
35. lcat ENSDARG00000099424 357 1.575 - 0.763 - - - - 0.812 - - lecithin-cholesterol acyltransferase [Source:ZFIN;Acc:ZDB-GENE-010716-3]
36. fam89a ENSDARG00000079979 4375 1.557 - - - - - 0.776 - - 0.781 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
37. cib1 ENSDARG00000103118 291 1.552 - - - - - 0.772 0.780 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
38. si:dkey-87o1.2 ENSDARG00000095796 6602 1.545 - - - - - 0.704 - - 0.841 si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
39. sp9 ENSDARG00000099374 2266 1.545 0.792 - - - - 0.753 - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
40. mbnl2 ENSDARG00000018460 3328 1.542 - - - - - 0.703 - - 0.839 muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
41. cdh1 ENSDARG00000102750 8654 1.536 - - - - - 0.761 - - 0.775 cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
42. rgra ENSDARG00000054890 848 1.517 0.730 - - - - - 0.787 - - retinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]
43. gatsl2 1618 1.517 - 0.814 - - - - 0.703 - - GATS protein-like 2
44. ankhb ENSDARG00000014969 328 1.511 - - - - - 0.721 0.790 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
45. limk2 ENSDARG00000005104 2598 1.501 - 0.757 - - - - 0.744 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
46. ccdc9 ENSDARG00000004636 912 1.5 - - - - - 0.723 - - 0.777 coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]
47. coro1ca ENSDARG00000035598 9278 1.495 - - - - - - 0.702 - 0.793 coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
48. abhd16a ENSDARG00000078929 1115 1.487 - - - - - 0.753 0.734 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
49. agpat4 ENSDARG00000069044 4487 1.478 - 0.763 - - - - - - 0.715 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
50. serinc2 ENSDARG00000056532 1406 1.467 - 0.767 - - - - 0.700 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
51. prrc1 ENSDARG00000044304 1567 1.462 - - - - - 0.727 - 0.735 - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
52. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 1.46 - 0.701 - - - 0.759 - - - churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
53. bc2 5213 1.457 - 0.706 - - - - - - 0.751 putative breast adenocarcinoma marker
54. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.446 - - - - - 0.716 0.730 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
55. crlf3 ENSDARG00000070261 904 1.419 - - - - - 0.707 0.712 - - cytokine receptor-like factor 3 [Source:ZFIN;Acc:ZDB-GENE-050417-354]
56. csrp1a ENSDARG00000006603 5188 0.967 - - - - - - - - 0.967 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
57. zgc:194839 ENSDARG00000078550 4003 0.967 - - - - - - - - 0.967 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
58. TMC6 TMC6 773 0.966 - - - - - - - - 0.966
59. fgf8a ENSDARG00000003399 580 0.963 - - - - - - - - 0.963 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
60. zgc:158254 ENSDARG00000071233 265 0.962 - - - - - - - - 0.962 zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
61. lap3 ENSDARG00000061981 1188 0.962 - - - - - - - - 0.962 leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
62. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.96 - - - - - - - - 0.960 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
63. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.96 - - - - - - - - 0.960 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
64. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.959 - - - - - - - - 0.959 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
65. CARD11 ENSDARG00000052741 249 0.958 - - - - - - - - 0.958 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
66. mmp9 ENSDARG00000042816 298 0.958 - - - - - - - - 0.958 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
67. zgc:113333 ENSDARG00000038242 797 0.958 - - - - - - - - 0.958 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
68. rpz2 ENSDARG00000091215 765 0.956 - - - - - - - - 0.956 rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
69. mir205 2147 0.956 - - - - - - - - 0.956 microRNA 205
70. pex7 ENSDARG00000042553 409 0.955 - - - - - - - - 0.955 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
71. PDZD8 ENSDARG00000088699 844 0.954 - - - - - - - - 0.954 PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
72. TSC22D1 ENSDARG00000038306 517 0.954 - - - - - - - - 0.954 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
73. gorasp1 gorasp1 3075 0.953 - - - - - - - - 0.953
74. fam65b 557 0.953 - - - - - - - - 0.953 family with sequence similarity 65, member B, transcript variant X4
75. ppp5c ENSDARG00000034313 8794 0.953 - - - - - - - - 0.953 protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
76. slc12a9 ENSDARG00000060366 293 0.952 - - - - - - - - 0.952 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
77. ssh2b ENSDARG00000098955 614 0.952 - - - - - - - - 0.952 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
78. C19H18orf21 C19H18orf21 338 0.949 - - - - - - - - 0.949
79. MALSU1 MALSU1 1251 0.949 - - - - - - - - 0.949
80. fam20c fam20c 603 0.949 - - - - - - - - 0.949
81. ing2 ENSDARG00000104907 1336 0.949 - - - - - - - - 0.949 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
82. vps28 ENSDARG00000103203 4991 0.948 - - - - - - - - 0.948 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
83. zgc:136439 ENSDARG00000009267 720 0.948 - - - - - - - - 0.948 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
84. dctd ENSDARG00000036990 2168 0.948 - - - - - - - - 0.948 dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
85. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 0.948 - - - - - - - - 0.948 hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
86. pfkfb2a ENSDARG00000023840 184 0.947 - - - - - - - - 0.947 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
87. sox8 sox8 109 0.947 - - - - - - - - 0.947
88. slc25a23a ENSDARG00000005690 824 0.947 - - - - - - - - 0.947 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
89. SLC35A2 ENSDARG00000058990 289 0.947 - - - - - - - - 0.947 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
90. nudt3b ENSDARG00000042123 311 0.947 - - - - - - - - 0.947 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
91. panx1a ENSDARG00000025285 352 0.946 - - - - - - - - 0.946 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
92. asap2b ENSDARG00000019564 1660 0.946 - - - - - - - - 0.946 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
93. atp2a3 ENSDARG00000060978 1408 0.946 - - - - - - - - 0.946 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
94. ZNF337_22 ZNF337_22 322 0.946 - - - - - - - - 0.946
95. dennd3a ENSDARG00000078797 542 0.946 - - - - - - - - 0.946 DENN/MADD domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-091230-6]
96. prkra ENSDARG00000076718 606 0.946 - - - - - - - - 0.946 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
97. fgf24 ENSDARG00000037677 242 0.945 - - - - - - - - 0.945 fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
98. slc6a19b ENSDARG00000056719 140 0.945 - - - - - - - - 0.945 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
99. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.945 - - - - - - - - 0.945
100. mpv17 ENSDARG00000032431 1225 0.945 - - - - - - - - 0.945 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA