Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-23

Gene Name Gene ID Reads Annotation
trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]










Genes with expression patterns similar to trim35-23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 2 - - 1.000 - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
2. hs3st4 ENSDARG00000052648 6 2 - - 1.000 - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
3. nkx2.7 ENSDARG00000021232 38 1.533 - - 0.801 - - - - - 0.732 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
4. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
5. fam207a_1 ENSDARG00000071500 1 1 - - 1.000 - - - - - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
6. FAM13C FAM13C 1 1 - - - - - - - - 1.000
7. ZNF768 ZNF768 1 1 - - 1.000 - - - - - -
8. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
9. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
10. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - 1.000 - - - - - -
11. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
12. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
13. tmem86a ENSDARG00000044034 1 1 - - 1.000 - - - - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
14. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - 1.000 - - - - - -
15. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - - 1.000
16. BX088551.1 BX088551.1 0 1 - - 1.000 - - - - - -
17. CABZ01057928.1 ENSDARG00000115082 1 1 - - 1.000 - - - - - - protein diaphanous homolog 1-like [Source:NCBI gene;Acc:101882228]
18. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
19. wbp4 ENSDARG00000068082 1 1 - - - - - - - - 1.000 WW domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-342]
20. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - - - - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
21. fkrp ENSDARG00000100467 0 1 - - 1.000 - - - - - - fukutin related protein [Source:ZFIN;Acc:ZDB-GENE-070412-4]
22. celsr3 ENSDARG00000055825 1 1 - - 1.000 - - - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
23. RBBP6_11 RBBP6_11 6 1 - - 1.000 - - - - - -
24. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
25. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - 1.000 - - - - - -
26. mrap2a ENSDARG00000074763 0 1 - - 1.000 - - - - - - melanocortin 2 receptor accessory protein 2a [Source:ZFIN;Acc:ZDB-GENE-100729-3]
27. frmd4bb ENSDARG00000076496 18 1 - - 1.000 - - - - - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
28. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
29. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
30. cda 3 1 - - - - - - - - 1.000 cytidine deaminase
31. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
32. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - 1.000 - - - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
33. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - - 1.000
34. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - 1.000 - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
35. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - - 1.000 - - - - - -
36. glsa ENSDARG00000062812 1 1 - - - - - - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
37. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
38. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
39. zgc:173856 ENSDARG00000045424 5 1 - - - - - - - - 1.000 zgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
40. kl ENSDARG00000079862 13 1 - - 1.000 - - - - - - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
41. ZNF608 3 1 - - 1.000 - - - - - - zinc finger protein 608, transcript variant X2
42. CR848787.1 CR848787.1 2 1 - - 1.000 - - - - - -
43. trpm5 ENSDARG00000059792 3 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
44. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - 1.000 - - - - - -
45. si:dkeyp-8f4.7 si:dkeyp-8f4.7 1 1 - - 1.000 - - - - - -
46. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
47. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
48. rtn4rl2a ENSDARG00000052012 5 1 - - 1.000 - - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
49. si:ch211-284e13.11 ENSDARG00000091997 3 1 - - 1.000 - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
50. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
51. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - - 1.000 - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
52. ZNF135_1 ZNF135_1 1 1 - - 1.000 - - - - - -
53. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
54. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
55. si:ch211-245n8.2 si:ch211-245n8.2 0 1 - - 1.000 - - - - - -
56. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - 1.000 - - - - - -
57. grm1a ENSDARG00000026796 9 1 - - 1.000 - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
58. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
59. CACNA1F CACNA1F 2 1 - - 1.000 - - - - - -
60. p2rx7 ENSDARG00000042440, ENSDARG00000116000 0 1 - - 1.000 - - - - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:ZFIN;Acc:ZDB-GENE-030319-6]
61. tcp10 tcp10 1 1 - - - - - - - - 1.000
62. CR936977.1 ENSDARG00000100144 4 1 - - - - - - - - 1.000
63. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
64. gabrr2b ENSDARG00000014057 9 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
65. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
66. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
67. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
68. GMEB2 ENSDARG00000093240 6 1 - - 1.000 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
69. si:dkeyp-51g9.4 ENSDARG00000099899 0 1 - - 1.000 - - - - - - si:dkeyp-51g9.4 [Source:ZFIN;Acc:ZDB-GENE-160628-1]
70. PEG3_33 PEG3_33 0 1 - - 1.000 - - - - - -
71. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
72. CMAS CMAS 10 1 - - - - - - - - 1.000
73. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
74. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
75. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
76. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
77. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
78. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
79. pdcb ENSDARG00000017634 10 1 - - 1.000 - - - - - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
80. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
81. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - 1.000 - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
82. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
83. POLR2E POLR2E 1 1 - - - - - - - - 1.000
84. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
85. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
86. CU694952.2 CU694952.2 3 1 - - 1.000 - - - - - -
87. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
88. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - 1.000 - - - - - -
89. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - - - - - 1.000
90. ZNF70_10 ZNF70_10 0 1 - - 1.000 - - - - - -
91. GTF3A GTF3A 6 1 - - - - - - - - 1.000
92. CU302326.1 CU302326.1 1 1 - - 1.000 - - - - - -
93. BX537350.1 BX537350.1 8 1 - - - - - - - - 1.000
94. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
95. CA4 CA4 1 1 - - 1.000 - - - - - -
96. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - 1.000 - - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
97. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - 1.000 - - - - - -
98. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - 1.000 - - - - - -
99. CR318629.1 CR318629.1 7 1 - - 1.000 - - - - - -
100. socs7_1 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 1 1 - - - - - - - - 1.000 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]

There are 138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA