Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-1

Gene Name Gene ID Reads Annotation
trim35-1 ENSDARG00000052037 43 tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]










Genes with expression patterns similar to trim35-1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-1 ENSDARG00000052037 43 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
2. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1.796 - 0.796 - - - 1.000 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
3. FP017169.3 FP017169.3 216 1.734 1.000 0.734 - - - - - - -
4. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.714 - 0.833 - - - 0.881 - - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
5. C21H11orf70 C21H11orf70 83 1.71 0.914 0.796 - - - - - - -
6. inha ENSDARG00000052433, ENSDARG00000116262 6 1.63 - - - 0.927 - - 0.703 - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
7. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1.623 - - - 0.920 - - 0.703 - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
8. zgc:73228 zgc:73228 97 1.618 - 0.717 - - - 0.901 - - -
9. PGBD1 PGBD1 61 1.609 - 0.733 - - 0.876 - - - -
10. fbln5 ENSDARG00000039273 105 1.553 - - - - 0.825 - - - 0.728 fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
11. hsd17b7_1 ENSDARG00000088140 36 1.542 - 0.796 - - - 0.746 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
12. BX005052.1 BX005052.1 16 1.54 - - - 0.794 - 0.746 - - -
13. zgc:162936 ENSDARG00000069957 95 1.54 0.715 - - - - 0.825 - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
14. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1.522 - - - - - - 0.703 - 0.819 family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
15. zgc:113279 ENSDARG00000099533 156 1.517 - 0.767 - - 0.750 - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
16. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.508 - - - - 0.745 0.763 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
17. pax6l pax6l 54 1.484 - 0.781 - - - - 0.703 - -
18. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 1.483 - 0.704 - - - 0.779 - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
19. si:ch73-389b16.2 ENSDARG00000103802 340 1.482 0.765 0.717 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
20. xcr1a xcr1a 3 1.449 - - - - - 0.746 0.703 - -
21. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1.449 - - - - - 0.746 0.703 - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
22. NLRP1 NLRP1 54 1.44 - 0.717 - - - - - - 0.723
23. si:dkey-220o10.1 si:dkey-220o10.1 63 1.439 - 0.736 - - - - 0.703 - -
24. PEG3_10 PEG3_10 45 1.438 - 0.717 - - - - - - 0.721
25. mpg ENSDARG00000069729 43 1.434 0.717 0.717 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
26. dnm1a ENSDARG00000010042 43 1.425 0.717 - - - - 0.708 - - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
27. gcgb ENSDARG00000040907 182 1.42 - 0.717 - - - - 0.703 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
28. crhb ENSDARG00000027657 9 1.42 - 0.717 - - - - 0.703 - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
29. FP074874.2 ENSDARG00000105724 107 1.42 0.717 - - - - - 0.703 - -
30. snx8b ENSDARG00000078057 15 1.417 - - - - - 0.714 0.703 - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
31. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1 - - - - - 1.000 - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
32. BSN_1 BSN_1 21 1 - - - - - 1.000 - - -
33. BX571853.2 ENSDARG00000110441 21 1 - - - - - 1.000 - - -
34. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - - - - - 1.000 - - -
35. KIF21B ENSDARG00000009733 53 1 - - - - - 1.000 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
36. RAI1 ENSDARG00000076679 59 1 - - - - - 1.000 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
37. CU695076.1 CU695076.1 7 1 - - - - - 1.000 - - -
38. CABZ01087562.1 CABZ01087562.1 80 1 1.000 - - - - - - - -
39. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - - - - - 1.000 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
40. atp8b1 ENSDARG00000060980 181 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
41. si:dkey-48k17.29 si:dkey-48k17.29 2 0.96 - - - - - - 0.960 - -
42. ucn3l ENSDARG00000087241 29 0.955 - 0.955 - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
43. si:ch211-216b21.2 ENSDARG00000060253 54 0.95 - - - - - 0.950 - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
44. pcdh8 ENSDARG00000006467 317 0.95 - - - - - 0.950 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
45. MTRF1 ENSDARG00000033579 107 0.947 - 0.947 - - - - - - - mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
46. b3gnt3.2 ENSDARG00000054373 16 0.943 0.943 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tendem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-528]
47. C1H20orf27 C1H20orf27 69 0.942 - - - - - 0.942 - - -
48. KCNK17 ENSDARG00000105453 16 0.941 - - - - - 0.941 - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
49. pou2f3 ENSDARG00000052387 103 0.941 - 0.941 - - - - - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
50. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 0.937 - - 0.937 - - - - - - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
51. si:ch73-189n23.1 ENSDARG00000086247 15 0.934 - - - 0.934 - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
52. fgf3 ENSDARG00000101540 75 0.928 - 0.928 - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
53. SOX8 SOX8 22 0.926 - - - 0.926 - - - - -
54. OVGP1 ENSDARG00000075745 6 0.926 - - - 0.926 - - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
55. vent ENSDARG00000100483 74 0.923 - - - 0.923 - - - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
56. commd9 ENSDARG00000094258, ENSDARG00000111031 49 0.922 - - - 0.922 - - - - - COMM domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070424-139]
57. ebf1b ENSDARG00000069196 64 0.921 - - - - - 0.921 - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
58. glcea ENSDARG00000005095 33 0.921 - - - - - 0.921 - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
59. zp2.6 ENSDARG00000091409 5 0.921 - - - 0.921 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
60. opn4xb ENSDARG00000103259 18 0.921 - - - - - - 0.921 - - opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
61. BX005329.3 ENSDARG00000094694 1 0.92 - - - 0.920 - - - - -
62. si:dkey-18c8.3 si:dkey-18c8.3 2 0.92 - - - 0.920 - - - - -
63. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.92 - - - 0.920 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
64. sb:cb846 sb:cb846 1 0.92 - - - 0.920 - - - - -
65. CABZ01006980.1 CABZ01006980.1 5 0.92 - - - 0.920 - - - - -
66. HTRA2_1 HTRA2_1 1 0.92 - - - 0.920 - - - - -
67. cx47.1 ENSDARG00000073896 1 0.92 - - - 0.920 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
68. CR382383.3 CR382383.3 2 0.92 - - - 0.920 - - - - -
69. tec ENSDARG00000098477 2 0.92 - - - 0.920 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
70. Metazoa_SRP_2 Metazoa_SRP_2 2 0.92 - - - 0.920 - - - - -
71. si:busm1-71b9.3 11 0.92 - - - 0.920 - - - - - si:busm1-71b9.3, transcript variant X4
72. zgc:158345 2 0.92 - - - 0.920 - - - - - zgc:158345
73. nrg2b ENSDARG00000086585 100 0.917 - - - - - 0.917 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
74. CMA1_1 CMA1_1 7 0.915 - - - 0.915 - - - - -
75. ZNF784_3 ZNF784_3 44 0.914 0.914 - - - - - - - -
76. si:rp71-20i5.5 si:rp71-20i5.5 9 0.914 0.914 - - - - - - - -
77. gcshb ENSDARG00000105187 182 0.914 - - - - 0.914 - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
78. nudt18 ENSDARG00000041576 61 0.914 0.914 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
79. ccdc173 ENSDARG00000077928 260 0.914 0.914 - - - - - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
80. skap2 ENSDARG00000000906 146 0.914 0.914 - - - - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
81. CABZ01058863.1 CABZ01058863.1 28 0.914 0.914 - - - - - - - -
82. ehf ENSDARG00000052115, ENSDARG00000112589 24 0.914 0.914 - - - - - - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
83. si:ch73-299h12.9 ENSDARG00000104488 81 0.911 - - - - - - 0.911 - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
84. C13H4orf32 C13H4orf32 174 0.91 - 0.910 - - - - - - -
85. si:dkey-261e22.5 si:dkey-261e22.5 68 0.908 - - - - - - 0.908 - -
86. FUT9 FUT9 91 0.906 - - - - - 0.906 - - -
87. si:rp71-1f1.4 ENSDARG00000092476 11 0.901 - - - 0.901 - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
88. si:dkey-157e10.7 si:dkey-157e10.7 105 0.9 - - - - - 0.900 - - -
89. RPS6KA2 ENSDARG00000028469 8 0.9 - - - - - 0.900 - - - ribosomal protein S6 kinase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-090827-1]
90. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 0.899 - - - 0.899 - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
91. st8sia7.1 ENSDARG00000054211 34 0.898 - - - 0.898 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
92. si:ch211-117n7.8 si:ch211-117n7.8 83 0.893 - - - 0.893 - - - - -
93. gas8 ENSDARG00000101431 140 0.892 0.892 - - - - - - - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
94. si:ch73-173m3.3 si:ch73-173m3.3 425 0.891 - - - - 0.891 - - - -
95. si:dkey-19f21.8 si:dkey-19f21.8 12 0.887 - - - 0.887 - - - - -
96. pld3 ENSDARG00000068199 205 0.884 - 0.884 - - - - - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
97. nr0b1 ENSDARG00000056541 35 0.88 - - - 0.880 - - - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
98. adh8a ENSDARG00000091211, ENSDARG00000113750 19 0.88 - - - 0.880 - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
99. efcab2 ENSDARG00000074323 88 0.879 0.879 - - - - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
100. HIST1H2BA_1 ENSDARG00000116654 37 0.879 - - - - - - - - 0.879 histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]

There are 829 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA