Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim2b

Gene Name Gene ID Reads Annotation
trim2b ENSDARG00000076174 250 tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]










Genes with expression patterns similar to trim2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim2b ENSDARG00000076174 250 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
2. DTX4 ENSDARG00000076302 2642 3.39 0.866 0.798 - - - 0.924 0.802 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
3. mapk12b ENSDARG00000006409 2246 2.62 0.831 - - - - 0.926 0.863 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
4. pkib ENSDARG00000053110 527 2.57 0.723 - - - - 0.957 0.890 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
5. gpr144 gpr144 479 2.564 0.773 - - - - 0.966 0.825 - -
6. bsk146 ENSDARG00000099069 274 2.549 0.777 - - - - 0.903 0.869 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
7. atp6ap1a ENSDARG00000041417 898 2.532 0.794 - - - - 0.966 0.772 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
8. scn1lab ENSDARG00000062744 155 2.531 0.753 - - - - 0.860 0.918 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
9. hmp19 2554 2.53 0.773 - - - - 0.903 0.854 - - HMP19 protein
10. sox2 ENSDARG00000070913 2763 2.525 0.745 - - - - 0.965 0.815 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
11. zic3 ENSDARG00000071497 1448 2.521 - 0.773 - - - 0.919 0.829 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
12. pnoca ENSDARG00000025024 467 2.519 - 0.739 - - - 0.930 0.850 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
13. layna ENSDARG00000035169 515 2.512 - 0.751 - - - 0.901 0.860 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
14. slc6a1b ENSDARG00000039647 1301 2.51 - 0.794 - - - 0.952 0.764 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
15. glra1 ENSDARG00000012019 315 2.481 - - - - 0.775 0.909 0.797 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
16. eno2 ENSDARG00000014287 2162 2.471 - - - - 0.701 0.915 0.855 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
17. slc32a1 ENSDARG00000059775 1092 2.462 0.850 - - - - 0.749 0.863 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
18. Sep-03 Sep-03 1124 2.458 0.765 - - - - 0.743 0.950 - -
19. nkx1.2lb ENSDARG00000099427 220 2.456 - - - - 0.762 0.821 0.873 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
20. scg2b ENSDARG00000038574 345 2.443 - - - - 0.781 0.888 0.774 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
21. cacng8b ENSDARG00000070626 176 2.441 0.821 - - - - 0.708 0.912 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
22. napg napg 645 2.433 - - - - 0.769 0.764 0.900 - -
23. ZFHX3 ENSDARG00000103057 7759 2.429 - 0.824 - - - 0.794 0.811 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
24. nrarpb ENSDARG00000018958 6225 2.427 0.753 - - - - 0.816 0.858 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
25. ric8a ENSDARG00000007247 229 2.423 0.765 - - - - 0.929 0.729 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
26. nadl1.2 695 2.389 0.705 - - - - 0.973 0.711 - - neural adhesion molecule L1.2, transcript variant X1
27. ppp2r2ba 321 2.386 0.715 - - - - 0.938 0.733 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
28. si:dkey-25e11.10 si:dkey-25e11.10 955 2.325 0.721 - - - - 0.787 0.817 - -
29. prph ENSDARG00000028306 242 2.308 0.733 - - - - 0.807 0.768 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
30. her3 ENSDARG00000076857 131 2.29 0.705 - - - - 0.856 0.729 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
31. irx1b ENSDARG00000056594 2224 2.285 0.731 - - - - 0.700 0.854 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
32. syt3 ENSDARG00000075830 430 2.28 0.709 - - - 0.788 - 0.783 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
33. her4.1 ENSDARG00000056732 1264 2.242 0.745 - - - - 0.730 0.767 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
34. CASS4 ENSDARG00000006775 760 2.195 0.705 - - - - 0.764 0.726 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
35. syn2a ENSDARG00000045945 434 1.881 - - - - - 0.955 0.926 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
36. si:ch211-133l11.10 ENSDARG00000005626 381 1.874 - - - - - 0.953 0.921 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
37. cbln1 ENSDARG00000057296 165 1.866 - - - - - 0.915 0.951 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
38. VSTM2B VSTM2B 149 1.866 - - - - - 0.967 0.899 - -
39. nxph1 ENSDARG00000033447 182 1.863 - - - - - 0.914 0.949 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
40. MAP6 MAP6 643 1.861 - - - - - 0.947 0.914 - -
41. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.847 - - - - - 0.956 0.891 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
42. si:ch73-21g5.7 ENSDARG00000093156 9412 1.835 - - - - - 0.964 0.871 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
43. pcsk1nl ENSDARG00000076170 1232 1.83 - - - - - 0.900 0.930 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
44. hecw1 hecw1 241 1.829 0.862 - - - - 0.967 - - -
45. C19H7orf41 C19H7orf41 2243 1.821 - - - - - 0.936 0.885 - -
46. nexmifb ENSDARG00000029296 416 1.816 - - - - - 0.904 0.912 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
47. TUBB2A TUBB2A 142 1.816 - - - - - 0.874 0.942 - -
48. BX957337.1 BX957337.1 1685 1.813 - - - - - 0.898 0.915 - -
49. CLIP3 ENSDARG00000054456 734 1.808 - - - - - 0.932 0.876 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
50. cnrip1a ENSDARG00000091683 1491 1.806 - - - - - 0.937 0.869 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
51. PPFIA3 ENSDARG00000077053 310 1.804 - - - - - 0.934 0.870 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
52. notch1b ENSDARG00000052094 7874 1.803 - - - - - 0.945 0.858 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
53. rad21b ENSDARG00000035655 87 1.799 0.823 - - - - 0.976 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
54. ADAM22 ENSDARG00000060532 2259 1.797 - - - - - 0.957 0.840 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
55. syt11a ENSDARG00000057913 1145 1.796 - - - - - 0.931 0.865 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
56. st8sia5 ENSDARG00000036584 529 1.795 - - - - - 0.882 0.913 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
57. kiaa1549la ENSDARG00000062477 143 1.792 - - - - - 0.875 0.917 - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
58. BX470131.1 BX470131.1 86 1.792 - - - - - 0.937 0.855 - -
59. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.792 - - - - - 0.938 0.854 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
60. st6gal1 ENSDARG00000044514 142 1.792 - - - - - 0.939 0.853 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
61. ROBO3_1 ROBO3_1 468 1.79 - - - - - 0.906 0.884 - -
62. KCNIP4 ENSDARG00000088100 86 1.786 - - - - - 0.895 0.891 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
63. her15.2 her15.2 1701 1.782 - - - - - 0.950 0.832 - -
64. CU856539.1 ENSDARG00000010023 190 1.781 0.910 - - - - - 0.871 - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
65. dnajc6 ENSDARG00000079891 438 1.776 - - - - - 0.897 0.879 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
66. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.775 - - - - - 0.849 0.926 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
67. tuba2 ENSDARG00000045014 1490 1.771 - - - - - 0.946 0.825 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
68. lhx5 ENSDARG00000057936 785 1.766 - - - - - 0.837 0.929 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
69. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.764 - - - - - 0.855 0.909 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
70. cacng8a ENSDARG00000020450 32 1.764 - - - - - 0.879 0.885 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
71. ppp3ca ENSDARG00000004988 615 1.762 - - - - - 0.933 0.829 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
72. stmn1b ENSDARG00000033655 9491 1.762 - - - - - 0.904 0.858 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
73. LINGO2 LINGO2 300 1.761 - - - - - 0.903 0.858 - -
74. LRFN2 118 1.76 - - - - - 0.930 0.830 - - leucine rich repeat and fibronectin type III domain containing 2
75. TMEM57 TMEM57 260 1.76 - - - - - 0.876 0.884 - -
76. plp1a ENSDARG00000103732 3544 1.759 - - - - - 0.889 0.870 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
77. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.758 - - - - - 0.905 0.853 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
78. TTYH1 ENSDARG00000076804 399 1.756 - - - - - 0.908 0.848 - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
79. adarb1a ENSDARG00000041609 476 1.756 - - - - - 0.904 0.852 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
80. stmn2a ENSDARG00000033234 2272 1.755 - - - - - 0.881 0.874 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
81. rdh12 ENSDARG00000018069 396 1.754 - - - - - 0.849 0.905 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
82. mex3b ENSDARG00000058369 1867 1.752 - - - - - 0.872 0.880 - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
83. sez6l2 ENSDARG00000076052 360 1.751 - - - - - 0.850 0.901 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
84. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.75 - - - - - 0.873 0.877 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
85. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.748 - - - - - 0.959 0.789 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
86. pcdh1gc5 ENSDARG00000104826 10052 1.746 - - - - - 0.834 0.912 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
87. mir10d-1 mir10d-1 860 1.745 - - - - - 0.881 0.864 - -
88. atp6v0a2a ENSDARG00000035538 278 1.745 - - - - - 0.882 0.863 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
89. st8sia2 ENSDARG00000018788 2183 1.745 - - - - - 0.885 0.860 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
90. st18 663 1.742 - - - - - 0.906 0.836 - - suppression of tumorigenicity 18, zinc finger
91. lingo1a ENSDARG00000034165 179 1.74 - - - - - 0.892 0.848 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
92. lrrc4.1 ENSDARG00000069402 323 1.74 0.823 - - - - - 0.917 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
93. SEMA7A ENSDARG00000078707 465 1.739 - - - - - 0.803 0.936 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
94. lgi3 ENSDARG00000041358 46 1.739 - - - - - 0.858 0.881 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
95. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.737 - - - - - 0.900 0.837 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
96. atcaya ENSDARG00000071678 344 1.734 - - - - - 0.919 0.815 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
97. dpysl4 ENSDARG00000103490 534 1.733 - - - - - 0.872 0.861 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
98. PROCA1 ENSDARG00000069823 343 1.731 0.835 - - - - 0.896 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
99. CABZ01065506.1 CABZ01065506.1 204 1.73 - - - - - 0.877 0.853 - -
100. emp1 ENSDARG00000069632 251 1.729 - - - - - 0.867 0.862 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]

There are 2446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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