Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim25

Gene Name Gene ID Reads Annotation
trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]










Genes with expression patterns similar to trim25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
2. ARSB ENSDARG00000108788 774 1.833 - 0.837 - - - - 0.996 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
3. ston2 ENSDARG00000057452 2977 1.827 - 0.844 - - - - 0.983 - - stonin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-137]
4. hand2 ENSDARG00000008305 1214 1.824 - - - - - 0.840 0.984 - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
5. PFKL_1 PFKL_1 298 1.817 - 0.822 - - - - 0.995 - -
6. PPP1R15B ENSDARG00000068128, ENSDARG00000114787 112 1.787 0.872 - - - - 0.915 - - - protein phosphatase 1, regulatory subunit 15B [Source:ZFIN;Acc:ZDB-GENE-030829-40]
7. osr1 ENSDARG00000014091 770 1.784 0.800 - - - - - 0.984 - - odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
8. RAB38 122 1.773 0.776 - - - - - 0.997 - - RAB38, member RAS oncogene family
9. ACSL1 ACSL1 240 1.761 - 0.892 - - - 0.869 - - -
10. dckl1b dckl1b 115 1.727 0.839 - - - - 0.888 - - -
11. fbrsl1 ENSDARG00000058232 885 1.727 - 0.732 - - - - 0.995 - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
12. ca4c ENSDARG00000044512 102 1.724 - 0.806 - - - 0.918 - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
13. si:ch211-203c7.2 si:ch211-203c7.2 885 1.716 - - - - - 0.732 0.984 - -
14. slc25a48 ENSDARG00000021250 1057 1.712 - 0.826 - - - 0.886 - - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
15. CU104700.1 CU104700.1 114 1.705 - 0.737 - - - 0.968 - - -
16. mctp2b ENSDARG00000073970 238 1.703 - 0.902 - - - 0.801 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
17. SNORD38 SNORD38 171 1.677 0.776 - - - - 0.901 - - -
18. tmem88b ENSDARG00000069388 501 1.676 - 0.787 - - - 0.889 - - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
19. tmprss2 ENSDARG00000098686 251 1.671 - 0.815 - - - 0.856 - - - transmembrane serine protease 2 [Source:ZFIN;Acc:ZDB-GENE-041212-48]
20. zgc:172106 ENSDARG00000017984 90 1.667 0.762 - - - - 0.905 - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
21. ches1 ENSDARG00000043553 96 1.666 0.724 - - - - 0.942 - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
22. dennd6b ENSDARG00000011605 412 1.611 0.726 - - - - 0.885 - - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
23. zgc:153151 ENSDARG00000069563 126 1.603 - 0.709 - - - 0.894 - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
24. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 1.596 0.706 - - - - 0.890 - - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
25. bub1 ENSDARG00000077029 634 1.56 - 0.737 - - - 0.823 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
26. hpcal4 ENSDARG00000070491 365 1.558 - 0.761 - - - 0.797 - - - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
27. KCTD9 KCTD9 147 1.553 0.756 - - - - 0.797 - - -
28. COL7A1 ENSDARG00000021720 2210 1.55 - - - - - 0.717 0.833 - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
29. gstp1 ENSDARG00000104068 12698 1.532 - 0.710 - - - - 0.822 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
30. sntb1 ENSDARG00000041729 163 1.523 - 0.702 - - - 0.821 - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
31. st3gal3b ENSDARG00000015252 465 1.519 - 0.797 - - - 0.722 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
32. emx1 ENSDARG00000039569 787 1.492 - 0.764 - - - 0.728 - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
33. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.481 0.768 0.713 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
34. tbp ENSDARG00000014994 1591 1.477 0.741 0.736 - - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
35. HHLA2_1 HHLA2_1 456 1.476 - 0.747 - - - 0.729 - - -
36. si:ch211-179l5.6 si:ch211-179l5.6 33 1.47 - 0.733 - - - 0.737 - - -
37. FMN1_2 FMN1_2 305 1.468 - 0.765 - - - 0.703 - - -
38. pou2f3 ENSDARG00000052387 103 1.434 0.704 - - - - 0.730 - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
39. slc9a3.2 ENSDARG00000036722 31 1.432 - 0.727 - - - 0.705 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
40. DLC1 ENSDARG00000079317 2149 1.421 0.718 - - - - 0.703 - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
41. CU019646.2 CU019646.2 519 0.998 - - - - - - 0.998 - -
42. rtdr1 rtdr1 158 0.998 - - - - - - 0.998 - -
43. rrp7a ENSDARG00000098934 1123 0.998 - - - - - - 0.998 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
44. acad11 ENSDARG00000045411 350 0.998 - - - - - - 0.998 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
45. CABZ01115256.1 CABZ01115256.1 683 0.998 - - - - - - 0.998 - -
46. IGSF8 ENSDARG00000038467 2102 0.998 - - - - - - 0.998 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
47. ankrd6b ENSDARG00000029370 429 0.998 - - - - - - 0.998 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
48. gnpat ENSDARG00000074401 479 0.997 - - - - - - 0.997 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
49. tmem104 ENSDARG00000088560 859 0.997 - - - - - - 0.997 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
50. timeless ENSDARG00000078497 1114 0.997 - - - - - - 0.997 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
51. ENSDARG00000078787 ENSDARG00000078787 97 0.997 - - - - - - 0.997 - -
52. si:ch211-51a6.2 ENSDARG00000030967 593 0.997 - - - - - - 0.997 - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
53. slc35b1 ENSDARG00000038213 465 0.997 - - - - - - 0.997 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
54. TPGS1 TPGS1 228 0.997 - - - - - - 0.997 - -
55. fam102ba ENSDARG00000053104 845 0.997 - - - - - - 0.997 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
56. ipmkb ENSDARG00000029291 625 0.997 - - - - - - 0.997 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
57. cap1 ENSDARG00000016350 891 0.997 - - - - - - 0.997 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
58. mpeg1 mpeg1 123 0.997 - - - - - - 0.997 - -
59. CABZ01078431.1 CABZ01078431.1 183 0.997 - - - - - - 0.997 - -
60. cryba1b ENSDARG00000053875 3256 0.997 - - - - - - 0.997 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
61. magixa ENSDARG00000025108 561 0.997 - - - - - - 0.997 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
62. ptk6a ENSDARG00000017947 682 0.997 - - - - - - 0.997 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
63. AL954146.1 ENSDARG00000038891 114 0.997 - - - - - - 0.997 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
64. mapk15 ENSDARG00000100822 157 0.997 - - - - - - 0.997 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
65. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.997 - - - - - - 0.997 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
66. itsn2a ENSDARG00000000161 115 0.997 - - - - - - 0.997 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
67. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.997 - - - - - - 0.997 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
68. thbs4a ENSDARG00000102777 625 0.997 - - - - - - 0.997 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
69. ncoa6 ENSDARG00000071272 759 0.997 - - - - - - 0.997 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
70. znf451 ENSDARG00000076939 508 0.996 - - - - - - 0.996 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
71. rnf168 ENSDARG00000112483 594 0.996 - - - - - - 0.996 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
72. nup98 ENSDARG00000074955 3998 0.996 - - - - - - 0.996 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
73. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.996 - - - - - - 0.996 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
74. hiat1a ENSDARG00000013117 607 0.996 - - - - - - 0.996 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
75. ino80c ENSDARG00000055719 1512 0.996 - - - - - - 0.996 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
76. fahd1 ENSDARG00000031657 521 0.996 - - - - - - 0.996 - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
77. pdcd10b ENSDARG00000012591 3395 0.996 - - - - - - 0.996 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
78. med14 ENSDARG00000009953 1383 0.996 - - - - - - 0.996 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
79. pcyt2 ENSDARG00000043003 3506 0.996 - - - - - - 0.996 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
80. si:ch211-13c6.2 ENSDARG00000027738 1521 0.996 - - - - - - 0.996 - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
81. trappc3 ENSDARG00000045364 1021 0.995 - - - - - - 0.995 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
82. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.995 - - - - - - 0.995 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
83. crb3b ENSDARG00000068182 683 0.995 - - - - - - 0.995 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
84. NBR1 NBR1 752 0.995 - - - - - - 0.995 - -
85. C13H6orf203 C13H6orf203 881 0.995 - - - - - - 0.995 - -
86. pkn1 pkn1 1510 0.995 - - - - - - 0.995 - -
87. loxl2b ENSDARG00000044074 1919 0.995 - - - - - - 0.995 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
88. calub ENSDARG00000005115 1478 0.995 - - - - - - 0.995 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
89. nlk1 ENSDARG00000006566 1123 0.995 - - - - - - 0.995 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
90. C2H6orf52 C2H6orf52 2847 0.995 - - - - - - 0.995 - -
91. ppm1ab ENSDARG00000043250 772 0.995 - - - - - - 0.995 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
92. PDE3B ENSDARG00000062190 372 0.995 - - - - - - 0.995 - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
93. cx35.4 ENSDARG00000042866 685 0.995 - - - - - - 0.995 - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
94. ripk1l ENSDARG00000006677 593 0.994 - - - - - - 0.994 - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
95. ccdc22 ENSDARG00000052379 2276 0.994 - - - - - - 0.994 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
96. si:ch73-18b11.1 si:ch73-18b11.1 3840 0.994 - - - - - - 0.994 - -
97. pam ENSDARG00000100170 2442 0.994 - - - - - - 0.994 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
98. ubald1a_1 ENSDARG00000002362 401 0.994 - - - - - - 0.994 - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
99. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.994 - - - - - - 0.994 - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
100. SLC24A2 ENSDARG00000042988 242 0.994 - - - - - - 0.994 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]

There are 1212 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA