Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim23

Gene Name Gene ID Reads Annotation
trim23 ENSDARG00000069420 103 tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]










Genes with expression patterns similar to trim23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim23 ENSDARG00000069420 103 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
2. ctgfb ENSDARG00000104292 69 1.897 - 1.000 - - - 0.897 - - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
3. htra1b ENSDARG00000014907 146 1.867 - 0.893 - - - 0.974 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
4. GBF1 ENSDARG00000027016 30 1.854 - 0.894 - - - 0.960 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
5. hcn4l ENSDARG00000074419 46 1.811 - - - - - 0.965 0.846 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
6. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.744 - 0.784 - - - 0.960 - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
7. si:ch211-26b3.4 ENSDARG00000075491 50 1.725 - 0.894 - - - - - 0.831 - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
8. si:dkey-196j8.2 ENSDARG00000093874 55 1.693 0.832 0.861 - - - - - - - si:dkey-196j8.2 [Source:ZFIN;Acc:ZDB-GENE-081107-58]
9. NINJ1 ENSDARG00000103663 43 1.688 - 0.894 - - - - 0.794 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
10. fam46a fam46a 92 1.688 - 0.820 - - - 0.868 - - -
11. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1.675 - - - - - 0.901 0.774 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
12. si:ch211-255l14.3 si:ch211-255l14.3 2 1.668 - 0.894 - - - - 0.774 - -
13. panx2 ENSDARG00000063019 3 1.668 - 0.894 - - - - 0.774 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
14. cd247l ENSDARG00000077240 25 1.668 - 0.894 - - - - 0.774 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
15. tk2 ENSDARG00000046127, ENSDARG00000111531 204 1.646 - - - - - 0.852 - 0.794 - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
16. PARP9 ENSDARG00000006848 34 1.64 - - - - - 0.846 0.794 - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
17. mmp11a ENSDARG00000026325 133 1.638 0.709 - - - - 0.929 - - - matrix metallopeptidase 11a [Source:ZFIN;Acc:ZDB-GENE-070817-3]
18. arf3a ENSDARG00000070539 29 1.631 - - - - - - 0.774 0.857 - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
19. si:ch211-271g18.2 si:ch211-271g18.2 34 1.629 - - - - - 0.859 0.770 - -
20. APOL4 APOL4 27 1.624 0.792 - - - - 0.832 - - -
21. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1.597 0.703 0.894 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
22. si:ch211-198c19.2 si:ch211-198c19.2 165 1.565 - - - - - - 0.716 0.849 -
23. ccbl2 4 1.562 - 0.788 - - - - 0.774 - - cysteine conjugate-beta lyase 2, transcript variant X4
24. cmklr1 ENSDARG00000090890 37 1.561 - - - - - 0.762 0.799 - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
25. cntnap5a ENSDARG00000073920 39 1.537 - - - - - - 0.703 0.834 - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
26. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.535 - 0.761 - - - - 0.774 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
27. ankmy1 ENSDARG00000062702 52 1.535 - 0.804 - - - - 0.731 - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
28. ing1 ENSDARG00000019116 394 1.53 0.764 - - - - 0.766 - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
29. si:ch211-249c2.1 ENSDARG00000102941 49 1.513 - 0.784 - - - 0.729 - - - si:ch211-249c2.1 [Source:ZFIN;Acc:ZDB-GENE-060503-317]
30. ccdc173 ENSDARG00000077928 260 1.504 - 0.764 - - - - 0.740 - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
31. ITPRIPL2 88 1.483 - - - - - 0.736 - 0.747 - inositol 1,4,5-trisphosphate receptor interacting protein like 2
32. adprh ENSDARG00000040712 298 1.435 0.735 0.700 - - - - - - - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
33. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - 1.000 - - - - - - -
34. bmpr2b ENSDARG00000020057 8 1 - 1.000 - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
35. ECT2L 39 1 - 1.000 - - - - - - - epithelial cell transforming 2 like, transcript variant X4
36. RNF14_1 RNF14_1 1 1 - 1.000 - - - - - - -
37. grin2db ENSDARG00000070620 101 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
38. CTBP2 CTBP2 19 1 - 1.000 - - - - - - -
39. CR388163.1 ENSDARG00000096928 5 1 - 1.000 - - - - - - -
40. frzb ENSDARG00000018383 93 1 - 1.000 - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
41. ccny ENSDARG00000063677 66 1 - 1.000 - - - - - - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
42. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 - 1.000 - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
43. si:ch211-152c8.4 ENSDARG00000101110 6 1 - 1.000 - - - - - - - si:ch211-152c8.4 [Source:ZFIN;Acc:ZDB-GENE-091204-235]
44. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - 1.000 - - - - - - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
45. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - 1.000 - - - - - - -
46. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 1 - 1.000 - - - - - - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
47. ENSDARG00000075779 ENSDARG00000075779 64 1 - 1.000 - - - - - - -
48. si:dkey-14k9.3 ENSDARG00000045595 256 0.979 - 0.979 - - - - - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
49. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 0.977 - - - - - 0.977 - - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
50. map1lc3c ENSDARG00000100528 31 0.968 - - - - - 0.968 - - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
51. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.968 - - - - - 0.968 - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
52. crtac1a ENSDARG00000059826 22 0.968 - - - - - 0.968 - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
53. slc25a3a ENSDARG00000027424 11 0.968 - - - - - 0.968 - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
54. trmt5 ENSDARG00000069278 228 0.967 - - - - - 0.967 - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
55. mlh3 ENSDARG00000056334 142 0.963 - - - - - 0.963 - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
56. cnstb ENSDARG00000042759 105 0.96 - - - - - 0.960 - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
57. paqr7a ENSDARG00000100462 15 0.96 - - - - - 0.960 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
58. gpr112b gpr112b 28 0.96 - - - - - 0.960 - - -
59. gsto1 ENSDARG00000022183 13 0.96 - - - - - 0.960 - - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
60. si:dkey-10o6.2 ENSDARG00000074628 22 0.96 - - - - - 0.960 - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
61. CYP2W1 CYP2W1 5 0.96 - - - - - 0.960 - - -
62. trim35-29 ENSDARG00000055730 24 0.96 - - - - - 0.960 - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
63. CT583625.1 ENSDARG00000093788 10 0.96 - - - - - 0.960 - - -
64. THSD7A THSD7A 69 0.96 - - - - - 0.960 - - -
65. CABZ01111936.2 CABZ01111936.2 2 0.96 - - - - - 0.960 - - -
66. syt5b ENSDARG00000011640 70 0.96 - - - - - 0.960 - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
67. FAM83H FAM83H 190 0.96 - - - - - 0.960 - - -
68. alk ENSDARG00000095833 32 0.96 - - - - - 0.960 - - - ALK receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-031027-1]
69. si:dkey-277m11.2 ENSDARG00000094879 15 0.96 - - - - - 0.960 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
70. qdprb2 ENSDARG00000086859, ENSDARG00000090118, ENSDARG00000113718, ENSDARG00000116809 5 0.96 - - - - - 0.960 - - - quinoid dihydropteridine reductase b2 [Source:ZFIN;Acc:ZDB-GENE-070720-19]
71. CR790363.2 CR790363.2 2 0.96 - - - - - 0.960 - - -
72. wnt2ba ENSDARG00000005050 11 0.96 - - - - - 0.960 - - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
73. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.96 - - - - - 0.960 - - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
74. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 0.96 - - - - - 0.960 - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
75. cx34.5 ENSDARG00000069411 3 0.96 - - - - - 0.960 - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
76. rundc3b ENSDARG00000009961 10 0.96 - - - - - 0.960 - - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
77. si:dkey-178o8.3 si:dkey-178o8.3 2 0.96 - - - - - 0.960 - - -
78. hpx ENSDARG00000012609 93 0.96 - - - - - 0.960 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
79. crybb1l3 ENSDARG00000007655 33 0.96 - - - - - 0.960 - - - crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
80. rln1 ENSDARG00000103762 8 0.96 - - - - - 0.960 - - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
81. hrh3 ENSDARG00000035942 32 0.96 - - - - - 0.960 - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
82. sdhda ENSDARG00000055712 50 0.96 - - - - - 0.960 - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
83. amy2a ENSDARG00000013856 13 0.96 - - - - - 0.960 - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
84. si:dkey-58f10.12 ENSDARG00000092680 258 0.96 - - - - - 0.960 - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
85. gsg1l ENSDARG00000037390 181 0.96 - - - - - 0.960 - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
86. CA4_1 CA4_1 3 0.96 - - - - - 0.960 - - -
87. urad ENSDARG00000071579, ENSDARG00000115541 46 0.96 - - - - - 0.960 - - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
88. il11b ENSDARG00000058557 17 0.96 - - - - - 0.960 - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
89. mcm5_2 ENSDARG00000019507 66 0.96 - - - - - 0.960 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
90. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 0.96 - - - - - 0.960 - - - zgc:172218 [Source:NCBI gene;Acc:793798]
91. cldn15b ENSDARG00000101109 4 0.96 - - - - - 0.960 - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
92. si:ch211-114l13.4 ENSDARG00000078246 2 0.96 - - - - - 0.960 - - - si:ch211-114l13.4 [Source:ZFIN;Acc:ZDB-GENE-070424-113]
93. si:ch1073-307h15.1 si:ch1073-307h15.1 2 0.96 - - - - - 0.960 - - -
94. kcnh4 kcnh4 6 0.96 - - - - - 0.960 - - -
95. il1b ENSDARG00000098700 27 0.96 - - - - - 0.960 - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
96. taok3a ENSDARG00000060751 254 0.96 - - - - - 0.960 - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
97. arl10 37 0.96 - - - - - 0.960 - - - ADP-ribosylation factor-like 10
98. si:dkey-78a14.4 ENSDARG00000036066 17 0.96 - - - - - 0.960 - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
99. tp53i11a ENSDARG00000069430 65 0.959 - - - - - 0.959 - - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
100. sp5l ENSDARG00000115868 361 0.958 - - - - - 0.958 - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]

There are 1046 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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