Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim16

Gene Name Gene ID Reads Annotation
trim16 ENSDARG00000010673 519 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]










Genes with expression patterns similar to trim16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim16 ENSDARG00000010673 519 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
2. TRIP10 TRIP10 1079 2.501 - - - - - - 0.714 0.843 0.944
3. CR759791.1 ENSDARG00000088591 160 2.408 - 0.849 0.831 - - 0.728 - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
4. slc2a8 ENSDARG00000104278 764 2.261 - 0.728 - - - 0.704 - 0.829 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
5. ndst2b ENSDARG00000060678 453 1.834 - - - - - - - 0.861 0.973 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
6. CU861453.1 ENSDARG00000097192 271 1.834 - 0.856 - - - - - - 0.978
7. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.818 - - - - - - - 0.847 0.971 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
8. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 1.804 - 0.845 - - - - - - 0.959 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
9. aldh16a1 ENSDARG00000037935 617 1.797 - 0.828 - - - - - - 0.969 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
10. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.78 - - - - - - - 0.851 0.929 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
11. pvrl1b 1645 1.777 - 0.868 - - - - - - 0.909 poliovirus receptor-related 1b
12. ikbkb ENSDARG00000079123 498 1.759 - - - - - - - 0.804 0.955 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
13. ankrd50l ENSDARG00000007077 1115 1.751 - 0.859 - - - - - 0.892 - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
14. lysmd3 ENSDARG00000024693 754 1.737 - - - - - 0.777 - - 0.960 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
15. gpr143 ENSDARG00000034572 559 1.734 - - - - - - - 0.746 0.988 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
16. ints8 ENSDARG00000057986 1063 1.724 - 0.817 - - - - - - 0.907 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
17. slc39a9 ENSDARG00000070447 971 1.716 - 0.769 - - - - - - 0.947 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
18. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.702 - 0.775 - - - - - - 0.927 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
19. ARID3A ENSDARG00000070843 1613 1.68 - 0.746 - - - - - - 0.934 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
20. srpx ENSDARG00000010318 946 1.68 - 0.866 - - - - - 0.814 - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
21. itgb1b.2 ENSDARG00000022689 523 1.677 - 0.871 - - - 0.806 - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
22. si:dkey-11f4.16 ENSDARG00000099799 121 1.675 0.833 - - - - - - 0.842 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
23. plekhm1 ENSDARG00000099954, ENSDARG00000114703 545 1.671 - 0.867 - - - - 0.804 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2752]
24. mgat2 ENSDARG00000052408 264 1.667 - 0.834 - - - - - 0.833 - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
25. cpvl ENSDARG00000056480 2115 1.665 - 0.736 - - - - - - 0.929 carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
26. si:dkey-57k17.1 ENSDARG00000104697 442 1.661 - 0.835 - - - - - 0.826 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
27. uchl1 ENSDARG00000026871 1578 1.657 - 0.833 - - - - - - 0.824 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
28. pdcd11 ENSDARG00000052480 2791 1.648 - - - - - - - 0.763 0.885 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
29. rbm42 ENSDARG00000039910 1111 1.647 - - - - - - 0.747 - 0.900 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
30. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 1.64 0.784 0.856 - - - - - - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
31. rab20 ENSDARG00000005049 346 1.64 0.791 - - - - - - 0.849 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
32. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 1.636 - 0.820 - - - - - 0.816 - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
33. si:dkey-27i16.3 si:dkey-27i16.3 494 1.632 0.767 0.865 - - - - - - -
34. cldn1 ENSDARG00000040045 5304 1.631 - 0.887 - - - - - 0.744 - claudin 1 [Source:ZFIN;Acc:ZDB-GENE-010328-11]
35. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 1.627 - 0.897 - - - - 0.730 - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
36. sdad1 ENSDARG00000105117 2819 1.627 - - - - - - - 0.703 0.924 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
37. med30 ENSDARG00000101115 133 1.625 - 0.849 - - - - 0.776 - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
38. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 1.619 - 0.823 - - - - - 0.796 - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
39. cables2a ENSDARG00000076964 1330 1.609 - - - - - - 0.735 - 0.874 Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
40. chaf1b ENSDARG00000056473 880 1.604 0.823 - - - - - - 0.781 - chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
41. cog7 ENSDARG00000061372 789 1.597 - 0.813 - - - - - 0.784 - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
42. psen1 ENSDARG00000004870 1590 1.579 0.709 - - - - - - - 0.870 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
43. FBXO33 ENSDARG00000075400 1164 1.577 - 0.804 - - - - - 0.773 - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
44. cnstb ENSDARG00000042759 105 1.573 - 0.852 0.721 - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
45. FOXO4 ENSDARG00000055792 1457 1.573 - 0.769 - - - - - - 0.804 forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
46. kat7 kat7 642 1.566 - 0.835 - - - - 0.731 - -
47. si:ch211-269i23.2 432 1.553 - - - - - 0.715 - 0.838 - si:ch211-269i23.2, transcript variant X3
48. acacb ENSDARG00000061994 1886 1.547 - 0.744 - - - 0.803 - - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
49. ahi1 ENSDARG00000044056 951 1.542 - 0.802 - - - - - 0.740 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
50. pxdc1b ENSDARG00000040309 571 1.528 - 0.732 - - - - - 0.796 - PX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-091204-294]
51. acot11a ENSDARG00000058229 531 1.52 0.718 0.802 - - - - - - - acyl-CoA thioesterase 11a [Source:ZFIN;Acc:ZDB-GENE-050522-538]
52. TMEM71 TMEM71 696 1.515 - - - - - 0.756 0.759 - -
53. PAX7 PAX7 1658 1.514 - - - - - - - 0.747 0.767
54. nrm ENSDARG00000063690 1371 1.508 - 0.731 - - - - - - 0.777 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
55. TMEM45A ENSDARG00000070743 1669 1.497 - - 0.733 - - - - 0.764 - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
56. wwp2 ENSDARG00000061345 3459 1.476 - 0.712 - - - - - 0.764 - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
57. u2af2b ENSDARG00000011740 6946 1.423 - 0.709 - - - - - - 0.714 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
58. RABEPK ENSDARG00000112165 112 0.99 - - - - - - - - 0.990 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
59. si:dkey-156k2.6 si:dkey-156k2.6 848 0.989 - - - - - - - - 0.989
60. rcbtb1 ENSDARG00000036645 255 0.988 - - - - - - - - 0.988 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
61. RFFL_1 RFFL_1 157 0.988 - - - - - - - - 0.988
62. zgc:173480 171 0.988 - - - - - - - - 0.988 zgc:173480
63. nupl2 ENSDARG00000029043 105 0.987 - - - - - - - - 0.987 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
64. ZNFX1 ENSDARG00000100280 118 0.987 - - - - - - - - 0.987 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
65. abcg1 ENSDARG00000063475 97 0.987 - - - - - - - - 0.987 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
66. KLF8 ENSDARG00000060661 219 0.986 - - - - - - - - 0.986 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
67. oraov1 497 0.986 - - - - - - - - 0.986 oral cancer overexpressed 1
68. cenpk ENSDARG00000039616 744 0.986 - - - - - - - - 0.986 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
69. rab11fip3 ENSDARG00000016490 661 0.986 - - - - - - - - 0.986 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
70. CTIF ENSDARG00000090617 270 0.986 - - - - - - - - 0.986 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
71. CABZ01054405.1 CABZ01054405.1 115 0.986 - - - - - - - - 0.986
72. PRDM12 PRDM12 133 0.985 - - - - - - - - 0.985
73. ZFAT ENSDARG00000077987 205 0.985 - - - - - - - - 0.985 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
74. ltc4s ENSDARG00000062598 138 0.985 - - - - - - - - 0.985 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
75. rxrgb ENSDARG00000004697 332 0.984 - - - - - - - - 0.984 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
76. flrt1a 107 0.984 - - - - - - - - 0.984 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
77. ttc21b ENSDARG00000012368 229 0.984 - - - - - - - - 0.984 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
78. SNAP91 ENSDARG00000098809 556 0.984 - - - - - - - - 0.984 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
79. ube3d ENSDARG00000026178 244 0.983 - - - - - - - - 0.983 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
80. ptn ENSDARG00000102340 229 0.983 - - - - - - - - 0.983 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
81. slc25a43 ENSDARG00000102048 489 0.983 - - - - - - - - 0.983 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
82. dkk3b ENSDARG00000070683 209 0.983 - - - - - - - - 0.983 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
83. slc6a6a ENSDARG00000012534 183 0.983 - - - - - - - - 0.983 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
84. ror1 ENSDARG00000015176 378 0.983 - - - - - - - - 0.983 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
85. si:ch211-133l11.10 ENSDARG00000005626 381 0.983 - - - - - - - - 0.983 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
86. AKAP12 AKAP12 140 0.982 - - - - - - - - 0.982
87. CR376785.2 CR376785.2 175 0.981 - - - - - - - - 0.981
88. nrxn3b ENSDARG00000062693 192 0.981 - - - - - - - - 0.981 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
89. rnf121 ENSDARG00000060282 1809 0.98 - - - - - - - - 0.980 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
90. CR678040.1 CR678040.1 117 0.98 - - - - - - - - 0.980
91. hck ENSDARG00000058647 318 0.98 - - - - - - - - 0.980 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
92. nol8 ENSDARG00000044143 425 0.98 - - - - - - - - 0.980 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
93. prmt6 ENSDARG00000069706 484 0.98 - - - - - - - - 0.980 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
94. pif1 ENSDARG00000020289 216 0.98 - - - - - - - - 0.980 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
95. lsm1 ENSDARG00000043177 767 0.979 - - - - - - - - 0.979 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
96. AL929322.1 AL929322.1 300 0.979 - - - - - - - - 0.979
97. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.978 - - - - - - - - 0.978 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
98. qser1 ENSDARG00000074750 597 0.978 - - - - - - - - 0.978 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
99. ncam2 ENSDARG00000017466 175 0.978 - - - - - - - - 0.978 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
100. DDX47_1 DDX47_1 453 0.977 - - - - - - - - 0.977

There are 1318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA