Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim13

Gene Name Gene ID Reads Annotation
trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]










Genes with expression patterns similar to trim13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
2. dapk1 ENSDARG00000060093 351 2.221 0.725 - - - - 0.744 - 0.752 - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
3. bag5 ENSDARG00000017316 195 1.823 - - - - - - 0.876 0.947 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
4. BX324131.3 BX324131.3 278 1.823 - - - - - - 0.876 0.947 -
5. CACFD1 ENSDARG00000090818 1298 1.771 0.848 - - - - - - 0.923 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
6. ccdc94 1417 1.726 - - - - - - 0.792 0.934 - coiled-coil domain containing 94
7. smurf2 ENSDARG00000038067 2057 1.701 - 0.853 - - - - - 0.848 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
8. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.694 - 0.730 - - - - - 0.964 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
9. WDR48 WDR48 448 1.686 - - - - - - 0.755 0.931 -
10. arhgap24 ENSDARG00000100973 1105 1.684 0.789 - - - - - 0.895 - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
11. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.682 - 0.740 - - - - - 0.942 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
12. trps1 ENSDARG00000104082 918 1.675 - 0.721 - - - - - 0.954 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
13. C3H19orf43 C3H19orf43 2961 1.669 - 0.747 - - - - - 0.922 -
14. chsy3 ENSDARG00000069472 271 1.658 0.733 - - - - - - 0.925 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
15. CABZ01058048.1 CABZ01058048.1 268 1.651 - - - - - 0.704 - 0.947 -
16. C5H9orf142 C5H9orf142 548 1.649 - - - - - - 0.721 0.928 -
17. CR352229.2 CR352229.2 784 1.638 - - - - - - 0.716 0.922 -
18. si:ch211-171h4.7 ENSDARG00000088408 168 1.638 - - - - - 0.777 0.861 - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
19. hs3st1l2 ENSDARG00000035578 279 1.634 0.801 - - - - - - 0.833 - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
20. slc25a39 ENSDARG00000007449 630 1.625 0.728 - - - - - - 0.897 - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
21. CCDC106 CCDC106 1908 1.623 0.734 - - - - - - 0.889 -
22. rnf26 ENSDARG00000074074 762 1.608 - - - - - - 0.712 0.896 - ring finger protein 26 [Source:ZFIN;Acc:ZDB-GENE-060727-1]
23. cstf1 ENSDARG00000044820 1663 1.604 - - - - - 0.789 - 0.815 - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
24. RNF169 ENSDARG00000042825 727 1.582 - - - - - - 0.854 0.728 - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
25. trim35-40 ENSDARG00000042116 398 1.582 0.764 - - - - - - 0.818 - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
26. wash wash 172 1.575 - 0.726 - - - - 0.849 - -
27. samd11 ENSDARG00000077852 631 1.562 - - - - - - 0.705 0.857 - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
28. gclm ENSDARG00000018953 1712 1.552 - 0.794 - - - - - 0.758 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
29. aplnrb ENSDARG00000036670 546 1.534 - - - - - - 0.721 0.813 - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
30. rnf216 ENSDARG00000087893 518 1.525 0.798 - - - - 0.727 - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
31. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 1.523 - - - - - - 0.727 0.796 - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
32. C2H14orf119 C2H14orf119 716 1.52 - - - - - 0.809 0.711 - -
33. ptprub ENSDARG00000101081 147 1.489 - - - - - 0.770 0.719 - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
34. CCDC114 ENSDARG00000015010 190 1.488 - 0.753 - - - 0.735 - - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
35. dgat1b ENSDARG00000054914 119 1.485 0.750 - - - - - 0.735 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
36. actr1 ENSDARG00000011611 3879 1.484 0.720 - - - - - - 0.764 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
37. si:dkey-238o14.5 si:dkey-238o14.5 450 1.479 0.727 0.752 - - - - - - -
38. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 1.472 0.733 - - - - - 0.739 - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
39. mir184 48 1.464 - - - - - 0.750 0.714 - - microRNA 184
40. rnf41 ENSDARG00000036831, ENSDARG00000111636 872 1.455 - - - - - - 0.716 0.739 - ring finger protein 41 [Source:ZFIN;Acc:ZDB-GENE-040426-2920]
41. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 1.435 - - - - - - 0.723 0.712 - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
42. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 0.97 - - - - - - - 0.970 - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
43. gpr61 ENSDARG00000055570 128 0.969 - - - - - - - 0.969 - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
44. naa30 ENSDARG00000079686 814 0.966 - - - - - - - 0.966 - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
45. cdan1 ENSDARG00000042261 658 0.964 - - - - - - - 0.964 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
46. dip2c dip2c 248 0.963 - - - - - - - 0.963 -
47. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.961 - - - - - - - 0.961 - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
48. alg8 ENSDARG00000044627, ENSDARG00000114612 325 0.961 - - - - - - - 0.961 - ALG8, alpha-1,3-glucosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5812]
49. cln8 ENSDARG00000075525, ENSDARG00000113042 601 0.958 - - - - - - - 0.958 - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
50. stard3nl ENSDARG00000045421 316 0.957 - - - - - - - 0.957 - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
51. fam86a fam86a 174 0.957 - - - - - - - 0.957 -
52. celsr1b ENSDARG00000058259 1219 0.957 - - - - - - - 0.957 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
53. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.956 - - - - - - - 0.956 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
54. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.956 - - - - - - - 0.956 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
55. si:dkey-7f3.9 ENSDARG00000079008 318 0.955 - - - - - - - 0.955 - si:dkey-7f3.9 [Source:ZFIN;Acc:ZDB-GENE-100922-197]
56. BX000999.4_1 BX000999.4_1 222 0.955 - - - - - - - 0.955 -
57. tmem145 ENSDARG00000088342 183 0.955 - - - - - - - 0.955 - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
58. znf131 ENSDARG00000068400, ENSDARG00000110506 920 0.954 - - - - - - - 0.954 - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
59. wnt8b ENSDARG00000006911 98 0.954 - - - - - - - 0.954 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
60. vps18 ENSDARG00000070433 320 0.953 - - - - - - - 0.953 - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
61. smfn ENSDARG00000009806 1280 0.953 - - - - - - - 0.953 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
62. gucy1b3 92 0.953 - - - - - - - 0.953 - guanylate cyclase 1, soluble, beta 3
63. ogfr ENSDARG00000037837 1001 0.953 - - - - - - - 0.953 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
64. ZNF337_7 ZNF337_7 198 0.953 - - - - - - - 0.953 -
65. ankrd10a ENSDARG00000037100 375 0.953 - - - - - - - 0.953 - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
66. pcyt1ba ENSDARG00000058162 206 0.953 - - - - - - - 0.953 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
67. sb:cb54 sb:cb54 475 0.952 - - - - - - - 0.952 -
68. dna2 ENSDARG00000078759 846 0.952 - - - - - - - 0.952 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
69. otx1b 96 0.952 - - - - - - - 0.952 - orthodenticle homeobox 1b
70. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.952 - - - - - - - 0.952 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
71. CR954963.1 ENSDARG00000097153 1135 0.951 - - - - - - - 0.951 -
72. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.951 - - - - - - - 0.951 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
73. FBXO48 ENSDARG00000086184 110 0.951 - - - - - - - 0.951 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
74. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.951 - - - - - - - 0.951 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
75. zgc:110366 ENSDARG00000004167 314 0.951 - - - - - - - 0.951 - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
76. E2F2 E2F2 871 0.951 - - - - - - - 0.951 -
77. pogza ENSDARG00000054778 1495 0.95 - - - - - - - 0.950 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
78. sec22c ENSDARG00000063387 203 0.95 - - - - - - - 0.950 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
79. lnx2b ENSDARG00000071478 654 0.95 - - - - - - - 0.950 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
80. smoc2 ENSDARG00000088157 646 0.95 - - - - - - - 0.950 - SPARC related modular calcium binding 2 [Source:ZFIN;Acc:ZDB-GENE-021031-5]
81. zdhhc3 zdhhc3 152 0.949 - - - - - - - 0.949 -
82. syt5b ENSDARG00000011640 70 0.949 - - - - - - - 0.949 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
83. zc3h3 ENSDARG00000090751 206 0.949 - - - - - - - 0.949 - zinc finger CCCH-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9399]
84. uso1 ENSDARG00000019581 479 0.949 - - - - - - - 0.949 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
85. si:ch211-76l23.6 si:ch211-76l23.6 68 0.949 - - - - - - - 0.949 -
86. speg speg 334 0.949 - - - - - - - 0.949 -
87. CABZ01027547.1 CABZ01027547.1 128 0.949 - - - - - - - 0.949 -
88. ENSDARG00000089986 ENSDARG00000089986 308 0.949 - - - - - - - 0.949 -
89. si:dkey-15h14.4 si:dkey-15h14.4 118 0.949 - - - - - - - 0.949 -
90. C2H1orf27 245 0.949 - - - - - - - 0.949 - c2h1orf27 homolog (H. sapiens), transcript variant X1
91. glipr1b ENSDARG00000030078 73 0.949 - - - - - - - 0.949 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
92. zhx2 zhx2 365 0.949 - - - - - - - 0.949 -
93. WIZ WIZ 1188 0.949 - - - - - - - 0.949 -
94. st6galnac1.2 ENSDARG00000043816 51 0.949 - - - - - - - 0.949 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
95. si:ch211-57i17.2 ENSDARG00000093354 58 0.948 - - - - - - - 0.948 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
96. vhl ENSDARG00000070617 663 0.948 - - - - - - - 0.948 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
97. mtfr2 ENSDARG00000060394 482 0.948 - - - - - - - 0.948 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
98. il21r il21r 74 0.948 - - - - - - - 0.948 -
99. fra10ac1 ENSDARG00000102615 425 0.948 - - - - - - - 0.948 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
100. gtf3c2 ENSDARG00000004574 153 0.947 - - - - - - - 0.947 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]

There are 1160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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