Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim108

Gene Name Gene ID Reads Annotation
trim108 ENSDARG00000061762, ENSDARG00000114698 5 tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]










Genes with expression patterns similar to trim108

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim108 ENSDARG00000061762, ENSDARG00000114698 5 5 1.000 - 1.000 - 1.000 - 1.000 - 1.000 tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
2. si:dkey-254e13.13 si:dkey-254e13.13 6 1.963 1.000 - - - - - - - 0.963
3. GPC6_1 GPC6_1 34 1.848 - - - - 1.000 - 0.848 - -
4. foxe1 ENSDARG00000079266 6 1.833 - - 0.928 - 0.905 - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
5. nsun5_1 ENSDARG00000043209 3 1.83 1.000 - - - 0.830 - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
6. sele ENSDARG00000009123 122 1.749 - - - - 1.000 - 0.749 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
7. cpa5 ENSDARG00000021339 61 1.738 1.000 - - - - - 0.738 - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
8. zgc:195170 ENSDARG00000076264 3 1.722 - - 1.000 - - - 0.722 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
9. man2a1 ENSDARG00000102200 12 1.722 1.000 - - - - - 0.722 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
10. mir21-2 18 1.701 - - - - - - 0.872 - 0.829 microRNA 21-2
11. rs1 rs1 70 1.648 - - - - 0.926 - 0.722 - -
12. U1_33 U1_33 76 1.606 0.719 - - - - - 0.887 - -
13. mir15a-1 36 1.474 - - 0.752 - - - 0.722 - - microRNA 15a-1
14. CABZ01074888.1 ENSDARG00000107066 1 1 - - 1.000 - - - - - -
15. TMEM173 ENSDARG00000091058 25 1 - - - - - - - - 1.000 transmembrane protein 173 [Source:ZFIN;Acc:ZDB-GENE-120921-1]
16. CABZ01072828.1 CABZ01072828.1 67 1 - - - - - - 1.000 - -
17. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
18. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
19. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
20. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
21. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
22. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
23. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
24. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
25. opn4b ENSDARG00000053929 143 1 - - - - - - 1.000 - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
26. KRT9 KRT9 7 1 - - - - 1.000 - - - -
27. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - 1.000 - - - - - -
28. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
29. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
30. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
31. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
32. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
33. si:ch211-38m6.6 ENSDARG00000076959 12 1 - - 1.000 - - - - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
34. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - 1.000 - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
35. WDR63 ENSDARG00000105093 13 1 - - 1.000 - - - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
36. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
37. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
38. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
39. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
40. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
41. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
42. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
43. cd4 cd4 4 1 - - 1.000 - - - - - -
44. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
45. SOX8 SOX8 22 1 - - - - 1.000 - - - -
46. HTRA2_4 HTRA2_4 1 1 - - 1.000 - - - - - -
47. BX927362.1 ENSDARG00000097469 13 1 - - 1.000 - - - - - -
48. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
49. zgc:109965 ENSDARG00000012126 11 1 - - - - 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
50. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
51. cacng8a ENSDARG00000020450 32 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
52. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
53. EPM2AIP1 EPM2AIP1 4 1 - - 1.000 - - - - - -
54. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
55. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
56. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
57. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - 1.000 - - - -
58. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
59. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
60. prelp ENSDARG00000070597 99 1 - - - - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
61. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
62. GRAMD3 GRAMD3 4 1 - - 1.000 - - - - - -
63. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
64. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
65. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
66. BX957278.1_1 ENSDARG00000010940 9 1 - - - - - - - - 1.000
67. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
68. dpyda dpyda 12 1 - - - - 1.000 - - - -
69. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
70. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
71. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
72. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
73. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
74. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
75. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
76. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - 1.000 - - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
77. CR854942.1 ENSDARG00000110092 1 1 - - 1.000 - - - - - -
78. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
79. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
80. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
81. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
82. si:ch211-264f5.2 ENSDARG00000078547 12 1 - - - - - - - - 1.000 si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
83. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
84. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
85. U6_10 U6_10 0 1 - - - - 1.000 - - - -
86. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
87. RIMS2_1 RIMS2_1 1 1 - - - - - - - - 1.000
88. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
89. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
90. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
91. si:ch211-237l4.6 ENSDARG00000056915 49 1 1.000 - - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
92. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
93. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
94. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
95. v2rc2 ENSDARG00000055952 1 1 - - 1.000 - - - - - - vomeronasal 2 receptor, c2 [Source:ZFIN;Acc:ZDB-GENE-050419-39]
96. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
97. si:dkey-103k4.3 si:dkey-103k4.3 2 1 - - 1.000 - - - - - -
98. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
99. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
100. U5_3 U5_3 3 1 1.000 - - - - - - - -

There are 672 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA