Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim108

Gene Name Gene ID Reads Annotation
trim108 ENSDARG00000061762, ENSDARG00000114698 5 tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]










Genes with expression patterns similar to trim108

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim108 ENSDARG00000061762, ENSDARG00000114698 5 5 1.000 - 1.000 - 1.000 - 1.000 - 1.000 tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
2. si:dkey-254e13.13 si:dkey-254e13.13 6 1.963 1.000 - - - - - - - 0.963
3. GPC6_1 GPC6_1 34 1.848 - - - - 1.000 - 0.848 - -
4. foxe1 ENSDARG00000079266 6 1.833 - - 0.928 - 0.905 - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
5. nsun5_1 ENSDARG00000043209 3 1.83 1.000 - - - 0.830 - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
6. sele ENSDARG00000009123 122 1.749 - - - - 1.000 - 0.749 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
7. cpa5 ENSDARG00000021339 61 1.738 1.000 - - - - - 0.738 - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
8. zgc:195170 ENSDARG00000076264 3 1.722 - - 1.000 - - - 0.722 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
9. man2a1 ENSDARG00000102200 12 1.722 1.000 - - - - - 0.722 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
10. mir21-2 18 1.701 - - - - - - 0.872 - 0.829 microRNA 21-2
11. rs1 rs1 70 1.648 - - - - 0.926 - 0.722 - -
12. U1_33 U1_33 76 1.606 0.719 - - - - - 0.887 - -
13. mir15a-1 36 1.474 - - 0.752 - - - 0.722 - - microRNA 15a-1
14. zgc:136605 ENSDARG00000042972 2 1 - - - - - - - - 1.000 zgc:136605 [Source:ZFIN;Acc:ZDB-GENE-060312-11]
15. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - 1.000 - - - -
16. CU326366.2 ENSDARG00000068593 11 1 - - - - 1.000 - - - -
17. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
18. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
19. CD200_2 CD200_2 47 1 1.000 - - - - - - - -
20. si:ch211-237l4.6 ENSDARG00000056915 49 1 1.000 - - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
21. irf1a ENSDARG00000043492 5 1 - - 1.000 - - - - - - interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
22. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
23. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
24. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
25. CU695006.1 CU695006.1 4 1 - - 1.000 - - - - - -
26. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
27. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
28. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
29. WDR63 ENSDARG00000105093 13 1 - - 1.000 - - - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
30. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - 1.000 - - - - - -
31. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1 - - - - 1.000 - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
32. zgc:171887 ENSDARG00000058791 0 1 - - - - 1.000 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
33. TMEM173 ENSDARG00000091058 25 1 - - - - - - - - 1.000 transmembrane protein 173 [Source:ZFIN;Acc:ZDB-GENE-120921-1]
34. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
35. oacyl ENSDARG00000075191 351 1 - - - - 1.000 - - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
36. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - 1.000 - - - - - -
37. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
38. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
39. v2rc2 ENSDARG00000055952 1 1 - - 1.000 - - - - - - vomeronasal 2 receptor, c2 [Source:ZFIN;Acc:ZDB-GENE-050419-39]
40. U1_16 U1_16 0 1 - - - - 1.000 - - - -
41. dazl ENSDARG00000036214 11 1 - - 1.000 - - - - - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
42. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
43. cd4 cd4 4 1 - - 1.000 - - - - - -
44. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
45. U5_3 U5_3 3 1 1.000 - - - - - - - -
46. si:dkey-113d16.4 si:dkey-113d16.4 1 1 - - 1.000 - - - - - -
47. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
48. lgals9l1 ENSDARG00000025903 58 1 - - 1.000 - - - - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
49. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - 1.000 - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
50. GRAMD3 GRAMD3 4 1 - - 1.000 - - - - - -
51. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
52. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
53. BX927362.1 ENSDARG00000097469 13 1 - - 1.000 - - - - - -
54. irbp 2 1 - - 1.000 - - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
55. SOX8 SOX8 22 1 - - - - 1.000 - - - -
56. EPM2AIP1 EPM2AIP1 4 1 - - 1.000 - - - - - -
57. zgc:123060 4 1 - - 1.000 - - - - - - zgc:123060
58. guk1b ENSDARG00000005776 23 1 - - - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
59. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
60. cacng8a ENSDARG00000020450 32 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
61. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - 1.000 - - - - - -
62. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
63. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
64. CTXN1 ENSDARG00000098284, ENSDARG00000113270 2 1 - - 1.000 - - - - - - cortexin 1 [Source:NCBI gene;Acc:101885932]
65. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
66. CSF3 CSF3 4 1 - - - - 1.000 - - - -
67. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - 1.000 - - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
68. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
69. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
70. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
71. HTRA2_4 HTRA2_4 1 1 - - 1.000 - - - - - -
72. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - 1.000 - - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
73. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
74. btr27 btr27 0 1 - - - - 1.000 - - - -
75. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
76. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
77. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
78. KRT9 KRT9 7 1 - - - - 1.000 - - - -
79. opn4b ENSDARG00000053929 143 1 - - - - - - 1.000 - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
80. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
81. CCSER1 ENSDARG00000075919 16 1 - - 1.000 - - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
82. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
83. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
84. si:dkey-172k15.6 ENSDARG00000095717 0 1 - - - - 1.000 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
85. si:dkey-103k4.3 si:dkey-103k4.3 2 1 - - 1.000 - - - - - -
86. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
87. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
88. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
89. lingo2 lingo2 67 1 1.000 - - - - - - - -
90. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
91. CR936977.1 ENSDARG00000100144 4 1 - - 1.000 - - - - - -
92. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
93. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
94. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - 1.000 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
95. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
96. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
97. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
98. CABZ01072828.1 CABZ01072828.1 67 1 - - - - - - 1.000 - -
99. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
100. si:ch211-264f5.2 ENSDARG00000078547 12 1 - - - - - - - - 1.000 si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]

There are 672 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA