Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trib3

Gene Name Gene ID Reads Annotation
trib3 ENSDARG00000016200 1231 tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]










Genes with expression patterns similar to trib3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trib3 ENSDARG00000016200 1231 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]
2. ajuba ENSDARG00000077842 1152 2.286 0.855 0.724 - - - - - 0.707 - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
3. ppp4ca ENSDARG00000070570 8395 1.67 - 0.826 - - - 0.844 - - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
4. gmfb ENSDARG00000028327 6522 1.639 0.877 0.762 - - - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
5. rhogb ENSDARG00000004301 358 1.61 0.831 0.779 - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
6. lmo7a ENSDARG00000004930 2414 1.603 0.720 0.883 - - - - - - - LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
7. C2H7orf25 C2H7orf25 209 1.583 0.842 0.741 - - - - - - -
8. ptpn21 ENSDARG00000062248 2010 1.552 0.829 - - - - - 0.723 - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
9. ttll4 ENSDARG00000078935 1663 1.549 0.804 - - - - 0.745 - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
10. foxk2 ENSDARG00000030583 2982 1.54 - - - - - - - 0.821 0.719 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
11. C3H16orf72 C3H16orf72 2059 1.538 0.797 - - - - 0.741 - - -
12. znf296 ENSDARG00000077897 658 1.531 0.830 - - - 0.701 - - - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
13. otub1b ENSDARG00000011462 4329 1.53 - - - - - 0.763 - 0.767 - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
14. ctnnb1 ENSDARG00000014571 12004 1.528 - 0.760 - - - - - 0.768 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
15. kazald3 ENSDARG00000053509 513 1.524 0.806 - - - - 0.718 - - - Kazal-type serine peptidase inhibitor domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-155]
16. efna1b ENSDARG00000018787 969 1.523 0.816 - - - - - 0.707 - - ephrin-A1b [Source:ZFIN;Acc:ZDB-GENE-041007-5]
17. leo1 ENSDARG00000055357 1644 1.522 0.799 - - - - - - 0.723 - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
18. SPAG5 SPAG5 1117 1.521 0.805 0.716 - - - - - - -
19. smarcc1a ENSDARG00000017397 2957 1.512 0.730 - - - - 0.782 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
20. ahctf1 ENSDARG00000077530 2315 1.51 0.798 - - - - - - - 0.712 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
21. TAF15 ENSDARG00000070019 5102 1.501 - - - - - - - 0.752 0.749 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
22. polr2d ENSDARG00000076509 3386 1.499 0.752 - - - - - - - 0.747 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
23. mycbp ENSDARG00000091001 1511 1.497 0.782 0.715 - - - - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
24. etfa ENSDARG00000101631 2946 1.496 0.788 - - - - 0.708 - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
25. get4 ENSDARG00000024398 1818 1.488 - 0.743 - - - 0.745 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
26. gfra2a ENSDARG00000042723 592 1.481 - 0.780 - - - - 0.701 - - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
27. tspan13a ENSDARG00000068883 678 1.474 0.774 - - - - 0.700 - - - tetraspanin 13a [Source:ZFIN;Acc:ZDB-GENE-040718-19]
28. ldb1a ENSDARG00000010137 3035 1.47 - - - - - - - 0.763 0.707 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
29. mau2 ENSDARG00000042056 2378 1.469 - - - - - - 0.713 0.756 - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
30. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1.469 - 0.714 - - - 0.755 - - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
31. tpm1 ENSDARG00000087402 1666 1.467 0.762 - - - - - 0.705 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
32. med14 ENSDARG00000009953 1383 1.457 - 0.753 - - - - - - 0.704 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
33. cnot10 ENSDARG00000058528 478 1.448 - 0.743 - - - 0.705 - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
34. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 1.447 - 0.708 - - - 0.739 - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
35. smarcb1b ENSDARG00000011594 2413 1.432 - 0.718 - - - - - 0.714 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
36. axin2 ENSDARG00000100149 4223 1.417 0.713 0.704 - - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
37. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.413 - 0.702 - - - - - 0.711 - chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
38. srcap ENSDARG00000005236 1740 1.403 - - - - - - 0.700 - 0.703 Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
39. tom1 ENSDARG00000104581 1457 0.914 0.914 - - - - - - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
40. ENSDARG00000086641 ENSDARG00000086641 1819 0.908 0.908 - - - - - - - -
41. pi4k2a ENSDARG00000033666 1257 0.894 0.894 - - - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
42. ralgps2 ENSDARG00000026519 1610 0.893 - 0.893 - - - - - - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
43. TRAPPC10 ENSDARG00000098118 954 0.892 - 0.892 - - - - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
44. ubr2 ENSDARG00000070164 3960 0.89 - - - - - 0.890 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
45. zgc:66475 ENSDARG00000099519 1348 0.888 0.888 - - - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
46. arl6ip5a ENSDARG00000077044, ENSDARG00000114089 1137 0.885 0.885 - - - - - - - - ADP-ribosylation factor-like 6 interacting protein 5a [Source:ZFIN;Acc:ZDB-GENE-031113-22]
47. cldn11b ENSDARG00000030723 863 0.883 - 0.883 - - - - - - - claudin 11b [Source:ZFIN;Acc:ZDB-GENE-010328-13]
48. CU655970.1 CU655970.1 2123 0.882 0.882 - - - - - - - -
49. ZC3H12A_1 ZC3H12A_1 558 0.881 0.881 - - - - - - - -
50. tax1bp3 ENSDARG00000059177 4324 0.881 0.881 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
51. krcp ENSDARG00000040224 5961 0.88 - - - - - 0.880 - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
52. wu:fc34e06 1793 0.879 0.879 - - - - - - - - wu:fc34e06, transcript variant X10
53. abca1a ENSDARG00000074635 1085 0.878 0.878 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
54. zgc:56585 ENSDARG00000026236 704 0.878 0.878 - - - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
55. USO1 ENSDARG00000019581 1617 0.876 0.876 - - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
56. LRP10 ENSDARG00000054539 1895 0.875 0.875 - - - - - - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
57. zgc:101663 ENSDARG00000037852 830 0.875 0.875 - - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
58. sh3yl1 ENSDARG00000074393 815 0.875 0.875 - - - - - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
59. tbca ENSDARG00000016754 6427 0.874 0.874 - - - - - - - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
60. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.874 - 0.874 - - - - - - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
61. NAALAD2 ENSDARG00000021383 704 0.874 0.874 - - - - - - - - N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
62. si:dkey-238o13.4 ENSDARG00000078847 884 0.873 0.873 - - - - - - - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
63. EPS8L2 ENSDARG00000058108 484 0.873 0.873 - - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
64. ap5s1 ENSDARG00000076755 318 0.872 0.872 - - - - - - - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
65. zgc:92313 ENSDARG00000040513 790 0.872 0.872 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
66. MRPL52 ENSDARG00000090568 4402 0.871 0.871 - - - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
67. als2b ENSDARG00000076924 738 0.871 - 0.871 - - - - - - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
68. smarcad1 smarcad1 1457 0.87 - 0.870 - - - - - - -
69. rabggta ENSDARG00000061024 332 0.87 - 0.870 - - - - - - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
70. grp ENSDARG00000043074 747 0.869 0.869 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
71. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 0.868 0.868 - - - - - - - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
72. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 0.868 0.868 - - - - - - - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
73. MAP3K6 MAP3K6 181 0.867 0.867 - - - - - - - -
74. dact2 ENSDARG00000056986 1121 0.866 - 0.866 - - - - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9975]
75. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 0.864 0.864 - - - - - - - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
76. ankrd10b ENSDARG00000004771 654 0.863 0.863 - - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
77. commd2 ENSDARG00000003373 540 0.863 0.863 - - - - - - - - COMM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-118]
78. tiam1a ENSDARG00000078430 2482 0.862 0.862 - - - - - - - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
79. slc26a5 ENSDARG00000022424 976 0.862 0.862 - - - - - - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
80. fam89a ENSDARG00000079979 4375 0.861 0.861 - - - - - - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
81. ubl7 ubl7 1435 0.859 0.859 - - - - - - - -
82. prickle1a ENSDARG00000040649 700 0.858 0.858 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
83. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.858 0.858 - - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
84. hoxd10a ENSDARG00000057859 1498 0.858 0.858 - - - - - - - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
85. ALPK1 195 0.857 0.857 - - - - - - - - alpha-kinase 1
86. pvrl3l pvrl3l 943 0.856 0.856 - - - - - - - -
87. hyi ENSDARG00000030166 1199 0.855 0.855 - - - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
88. zgc:162946 zgc:162946 74 0.855 0.855 - - - - - - - -
89. zgc:110626 ENSDARG00000053159 1124 0.855 0.855 - - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
90. BX005085.2 ENSDARG00000098122 196 0.855 0.855 - - - - - - - -
91. gla ENSDARG00000036155, ENSDARG00000110713 228 0.855 0.855 - - - - - - - - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
92. igf2r ENSDARG00000006094 1578 0.854 0.854 - - - - - - - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
93. iah1 ENSDARG00000015765 326 0.854 0.854 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
94. dyrk1ab ENSDARG00000023814 1769 0.853 0.853 - - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
95. fa2h ENSDARG00000090063 1084 0.852 0.852 - - - - - - - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
96. wu:fb15e04 wu:fb15e04 1713 0.852 0.852 - - - - - - - -
97. rgl2 ENSDARG00000007727 1096 0.852 0.852 - - - - - - - - ral guanine nucleotide dissociation stimulator-like 2 [Source:ZFIN;Acc:ZDB-GENE-010131-1]
98. rabl6 rabl6 489 0.851 0.851 - - - - - - - -
99. selk 954 0.851 0.851 - - - - - - - - selenoprotein K
100. ccnk ENSDARG00000034146 1255 0.851 0.851 - - - - - - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]

There are 1018 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA