Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trap1

Gene Name Gene ID Reads Annotation
trap1 ENSDARG00000024317, ENSDARG00000114173 2189 TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]










Genes with expression patterns similar to trap1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
2. CU633479.5 ENSDARG00000114818 1815 2.493 - 0.871 - - - 0.839 0.783 - -
3. ntmt1 ENSDARG00000022399 5779 2.435 - 0.873 - - - 0.720 0.842 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
4. txlnbb ENSDARG00000076241 6396 2.413 - 0.875 - - - 0.758 0.780 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
5. tnnc1b ENSDARG00000037539 13945 2.39 - 0.864 - - - 0.759 0.767 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
6. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.375 - 0.776 - - - 0.749 0.850 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
7. jph1a ENSDARG00000058603 2852 2.353 - 0.842 - - - 0.737 0.774 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
8. ndufa5 ENSDARG00000039346 2617 2.349 - 0.822 - - - 0.775 0.752 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
9. mdh1b ENSDARG00000018008 3196 2.338 - 0.759 - - - 0.771 0.808 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
10. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 2.338 - 0.734 - - - 0.744 0.860 - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
11. myoz2a ENSDARG00000012311 1373 2.324 - 0.793 - - - 0.730 0.801 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
12. limch1a ENSDARG00000074275 2981 2.319 - 0.821 - - - 0.714 0.784 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
13. rp42-pen rp42-pen 3395 2.319 - 0.826 - - - 0.707 0.786 - -
14. vwde ENSDARG00000103443 5758 2.315 - 0.899 - - - 0.715 0.701 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
15. BX530018.3 ENSDARG00000107022 614 2.313 - 0.764 - - 0.834 - 0.715 - -
16. hsd17b10 ENSDARG00000017781 1793 2.295 0.709 0.753 - - - - 0.833 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
17. acsl1 acsl1 4216 2.295 0.707 - - - - 0.806 0.782 - -
18. sh3bgr ENSDARG00000021633 3498 2.289 - 0.802 - - - 0.731 0.756 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
19. atp5o 10343 2.288 - - 0.717 - - 0.807 0.764 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
20. smarcd3a ENSDARG00000038786 2894 2.283 - 0.819 - - - 0.709 0.755 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
21. zgc:158296 ENSDARG00000070923 3935 2.28 - 0.742 - - - 0.752 0.786 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
22. hmbsa ENSDARG00000008840 2601 2.28 - 0.714 - - - 0.744 0.822 - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
23. fbp2 ENSDARG00000012366 1042 2.241 - 0.710 - - - 0.735 0.796 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
24. CR847973.1 ENSDARG00000115516 8754 2.233 - 0.771 - - - 0.735 0.727 - -
25. myoz2b ENSDARG00000037266 2139 2.228 - 0.720 - - - 0.757 0.751 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
26. MYOM3 2720 2.218 - 0.758 - - - 0.729 0.731 - - myomesin 3, transcript variant X2
27. txnipb ENSDARG00000070000 2365 2.191 - 0.740 - - - 0.723 0.728 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
28. MUSTN1 MUSTN1 1882 2.163 - 0.708 - - - 0.731 0.724 - -
29. tns1 tns1 5891 1.715 - 0.866 - - - - 0.849 - -
30. camk2a ENSDARG00000053617 950 1.712 - 0.923 - - - - 0.789 - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
31. chrna1 ENSDARG00000009021 2931 1.698 - 0.906 - - - - 0.792 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
32. TENC1 TENC1 1729 1.692 - 0.848 - - - - 0.844 - -
33. atp5j 4272 1.689 - - - - - 0.814 0.875 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
34. aimp1 ENSDARG00000060036 5343 1.67 - - - - - 0.841 0.829 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
35. uqcrc2a ENSDARG00000014794 3949 1.667 - 0.815 - - - - 0.852 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
36. cox7c ENSDARG00000104537 12169 1.665 - - - - - 0.821 0.844 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
37. xirp2a ENSDARG00000071113 7113 1.661 - 0.875 - - - - 0.786 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
38. pomp ENSDARG00000032296 4439 1.657 - 0.804 - - - - 0.853 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
39. COL22A1 COL22A1 4473 1.656 - 0.884 - - - - 0.772 - -
40. aqp1a.1 ENSDARG00000023713 3237 1.655 - 0.898 - - - - 0.757 - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
41. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.652 - 0.855 - - - - 0.797 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
42. BX294434.1 ENSDARG00000061272 6493 1.648 - 0.847 - - - - 0.801 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
43. MYOT ENSDARG00000076312 1791 1.648 - 0.838 - - - - 0.810 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
44. atp5h 18018 1.645 - 0.800 - - - 0.845 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
45. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.643 - 0.838 - - - - 0.805 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
46. MRPS17 ENSDARG00000054164 971 1.64 - 0.834 - - - 0.806 - - - mitochondrial ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-050522-390]
47. mrpl27 ENSDARG00000032985 2158 1.639 - 0.800 - - - 0.839 - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
48. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.639 - - - - - 0.778 0.861 - - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
49. ndufs6 ENSDARG00000056583 7220 1.639 - - - - - 0.788 0.851 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
50. gstm gstm 4064 1.636 - 0.805 - - - - 0.831 - -
51. PTP4A3 ENSDARG00000039997 3814 1.634 - 0.870 - - - - 0.764 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
52. fitm1 ENSDARG00000056464 1759 1.634 - 0.828 - - - - 0.806 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
53. hspg2 ENSDARG00000076564 3440 1.634 - 0.841 - - - - 0.793 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
54. C13H10orf71 3489 1.634 - 0.853 - - - - 0.781 - - chromosome 13 C10orf71 homolog
55. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.631 - 0.825 - - - - 0.806 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
56. nmrk2 ENSDARG00000067848 10293 1.629 - 0.834 - - - - 0.795 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
57. srpk3 ENSDARG00000005916 1546 1.625 - 0.839 - - - - 0.786 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
58. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.623 - - - - - 0.793 0.830 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
59. srl ENSDARG00000104587 11126 1.621 - 0.845 - - - - 0.776 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
60. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.62 - 0.830 - - - - 0.790 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
61. sgcb ENSDARG00000052341 4168 1.619 - 0.870 - - - - - 0.749 - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
62. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.619 - - - - - 0.747 0.872 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
63. GPRC5B GPRC5B 897 1.618 - 0.790 - - - - 0.828 - -
64. TMPO TMPO 3264 1.613 - 0.804 - - - - 0.809 - -
65. sucla2 ENSDARG00000005359 5992 1.611 - 0.861 - - - 0.750 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
66. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.611 - 0.865 - - - - 0.746 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
67. mrpl44 ENSDARG00000094277 1778 1.611 - 0.822 - - - - 0.789 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
68. znf106a ENSDARG00000016651 6049 1.611 - 0.787 - - - - 0.824 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
69. ryr1b ENSDARG00000023797 5693 1.61 - 0.846 - - - - 0.764 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
70. eif2s2 ENSDARG00000053047 15904 1.609 - - - - - 0.748 0.861 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
71. tmem242 ENSDARG00000037070 1081 1.609 - 0.819 - - - - 0.790 - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
72. PHB2 PHB2 3755 1.609 - 0.827 - - - - 0.782 - -
73. mef2cb ENSDARG00000009418 1124 1.608 - 0.868 - - - - 0.740 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
74. hapln1a ENSDARG00000089769 12334 1.608 - 0.812 - - - - 0.796 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
75. ITGB1BP2 ENSDARG00000030176 2472 1.607 - 0.829 - - - - 0.778 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
76. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.604 - - - - - 0.770 0.834 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
77. ndufb3 ENSDARG00000075709 6609 1.601 - - - - - 0.820 0.781 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
78. ORAI1 ORAI1 341 1.6 - - - - - 0.809 0.791 - -
79. mrpl36 ENSDARG00000070607 4069 1.6 - - - - - 0.853 0.747 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
80. per1b ENSDARG00000012499 320 1.599 - 0.880 - - - - 0.719 - - period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
81. alg3 ENSDARG00000053155 1843 1.599 - 0.836 - - - - 0.763 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
82. nop56 ENSDARG00000012820 15231 1.599 - 0.876 - - - 0.723 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
83. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.596 - 0.795 - - - - 0.801 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
84. PTPLA PTPLA 4044 1.594 - 0.799 - - - - 0.795 - -
85. mrpl12 ENSDARG00000038768 5539 1.594 - 0.817 - - - 0.777 - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
86. pno1 ENSDARG00000008502 4547 1.593 - 0.754 - - - - 0.839 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
87. prx ENSDARG00000017246 6183 1.589 - 0.795 - - - - 0.794 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
88. pygmb ENSDARG00000013317 5454 1.589 - 0.768 - - - - 0.821 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
89. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.588 - 0.786 - - - - 0.802 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
90. ndufb11 ENSDARG00000043467 7495 1.587 - - - - - 0.758 0.829 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
91. myod1 ENSDARG00000030110 6019 1.587 - 0.765 - - - - 0.822 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
92. pygma ENSDARG00000055518 15972 1.585 - 0.857 - - - - 0.728 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
93. gypc ENSDARG00000041546 1487 1.584 - 0.854 - - - - 0.730 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
94. FHOD3_1 FHOD3_1 983 1.582 - 0.862 - - - - 0.720 - -
95. timm9 ENSDARG00000043865 2456 1.578 - 0.808 - - - 0.770 - - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
96. pbxip1a ENSDARG00000071015 4960 1.578 - 0.816 - - - - 0.762 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
97. CR392006.1 CR392006.1 1401 1.578 - 0.825 - - - - 0.753 - -
98. farsa ENSDARG00000098825 2813 1.577 - 0.733 - - - - 0.844 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
99. COX20 ENSDARG00000099997 1451 1.575 - - - - - 0.783 0.792 - - cytochrome c oxidase assembly factor COX20 [Source:ZFIN;Acc:ZDB-GENE-040718-467]
100. ahsa1 ahsa1 2012 1.575 - - - - - 0.851 0.724 - -

There are 1505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA