Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tram2

Gene Name Gene ID Reads Annotation
tram2 ENSDARG00000030092 1906 translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]










Genes with expression patterns similar to tram2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tram2 ENSDARG00000030092 1906 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]
2. BRPF3 BRPF3 458 2.223 - 0.744 - - - 0.709 - - 0.770
3. si:ch211-214j24.10 ENSDARG00000045847 5145 2.213 0.803 - - - - - 0.702 0.708 - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
4. ctsf ENSDARG00000063095 4564 1.843 0.938 - - - - - - - 0.905 cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
5. lama5 ENSDARG00000058543 2782 1.732 0.933 - - - - - - 0.799 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
6. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.726 0.946 - - - - 0.780 - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
7. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.723 0.957 - - - - - - - 0.766 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
8. myeov2 3351 1.721 0.929 - - - - - - - 0.792 myeloma overexpressed 2
9. aacs ENSDARG00000012468 1138 1.707 0.942 - - - - - - - 0.765 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
10. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.706 0.928 - - - - - - - 0.778 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
11. mark3 mark3 1375 1.705 0.941 - - - - - - - 0.764
12. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 1.699 0.946 - 0.753 - - - - - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
13. xpot ENSDARG00000099652 3026 1.688 0.924 - - - - - - - 0.764 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
14. chpt1 ENSDARG00000014572 2926 1.685 0.931 - - - - - 0.754 - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
15. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.682 0.935 - - - - - - 0.747 - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
16. sos1 ENSDARG00000100503 388 1.681 0.954 - 0.727 - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
17. emc8 ENSDARG00000017093 1947 1.677 0.922 - 0.755 - - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
18. MTMR4 1374 1.676 0.941 - - - - 0.735 - - - myotubularin related protein 4, transcript variant X3
19. sdr16c5a ENSDARG00000016233 2413 1.674 0.901 - - - - - - - 0.773 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
20. ZFP36 ZFP36 1677 1.673 0.934 - - - - - 0.739 - -
21. chmp2bb ENSDARG00000002190 4629 1.673 0.941 - - - - - 0.732 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
22. tead3a ENSDARG00000074321 2240 1.657 0.936 - - - - - - - 0.721 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
23. reep3 reep3 2536 1.652 0.918 - - - - - - - 0.734
24. capn5a ENSDARG00000103317 1923 1.652 0.943 - - - - - - 0.709 - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
25. epn2 ENSDARG00000008377 5458 1.64 0.925 - - - - - 0.715 - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
26. skia ENSDARG00000042151 1850 1.628 0.908 - - - - - - 0.720 - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
27. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.623 0.903 - - - - 0.720 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
28. EMP3 EMP3 523 1.615 - - - 0.820 - 0.795 - - -
29. CU469577.1 ENSDARG00000102850 1232 1.613 - - - - - 0.866 - 0.747 -
30. f11r f11r 16668 1.612 0.906 - - - - 0.706 - - -
31. appbp2 ENSDARG00000007566 1961 1.609 - - - - - 0.708 - - 0.901 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
32. MCUR1 MCUR1 786 1.605 - - - - - 0.830 - - 0.775
33. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.598 - - - - - 0.829 - - 0.769 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
34. ssr2 ENSDARG00000005230 31940 1.593 0.853 - - - - - - - 0.740 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
35. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.574 0.792 - - - - - 0.782 - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
36. nckap1 ENSDARG00000060853 3540 1.573 - - - - - 0.704 - - 0.869 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
37. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.566 - - - - - 0.831 0.735 - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
38. colgalt2 ENSDARG00000014670 1932 1.564 - - - - - - 0.861 0.703 - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
39. ptpmt1 ENSDARG00000013860 772 1.563 - - - - - 0.796 - - 0.767 protein tyrosine phosphatase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]
40. kbp kbp 701 1.558 - 0.797 - - - - - - 0.761
41. gpx4b ENSDARG00000076836 8085 1.546 0.844 - - - - - 0.702 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
42. tmem45b ENSDARG00000056239 2395 1.542 - - - - - - 0.745 0.797 - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
43. get4 ENSDARG00000024398 1818 1.541 - 0.743 - - - 0.798 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
44. dusp11 ENSDARG00000038156 2490 1.533 - - - - - - 0.749 - 0.784 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
45. cyb5b ENSDARG00000099774 1224 1.531 - - - - - 0.819 0.712 - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
46. AL929222.1 ENSDARG00000096994 1293 1.52 - - - - - 0.744 - - 0.776
47. ypel5 ENSDARG00000088929 1011 1.518 - - - - - 0.706 - - 0.812 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
48. hsd17b12a ENSDARG00000015709 2499 1.512 - - 0.756 - - - 0.756 - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
49. cav2 ENSDARG00000052000 2516 1.506 - - - - - - 0.792 0.714 - caveolin 2 [Source:ZFIN;Acc:ZDB-GENE-040625-164]
50. rarga ENSDARG00000034117 1238 1.495 - - - - - 0.769 - - 0.726 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
51. CU207276.4 CU207276.4 1427 1.494 - - - 0.758 - - - 0.736 -
52. lpar2b ENSDARG00000042561 1086 1.488 - - - - - 0.705 - 0.783 - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
53. wu:fa03e10 2390 1.487 - - - - - 0.760 0.727 - - wu:fa03e10
54. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.484 - 0.724 - - - 0.760 - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
55. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.481 - - - - - - 0.759 - 0.722 mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
56. ubap1 ENSDARG00000058746 1049 1.481 - - - - - 0.779 0.702 - - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
57. cyp2v1 ENSDARG00000018485 694 1.479 - - 0.762 - - - 0.717 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
58. xrn1 ENSDARG00000091652 2864 1.477 - - - - - - - 0.712 0.765 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
59. olfml2a ENSDARG00000005648 1157 1.475 - - - - - - 0.703 - 0.772 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
60. mmp2 ENSDARG00000017676 2347 1.472 - - - - - 0.751 0.721 - - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
61. aldh4a1 ENSDARG00000038207 4639 1.447 0.723 - - - - 0.724 - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
62. cabp1a ENSDARG00000019990 110 1.444 - - 0.729 - - 0.715 - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
63. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 1.427 - - 0.725 - - - - 0.702 - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
64. EIF4G1_1 EIF4G1_1 3721 1.425 - 0.723 - - - - - - 0.702
65. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 1.42 - - - - - 0.714 - 0.706 - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
66. klf6a ENSDARG00000029072 3758 1.419 - - - - - - - 0.716 0.703 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
67. si:dkey-228b2.5 1760 0.988 0.988 - - - - - - - - si:dkey-228b2.5
68. RABGAP1L ENSDARG00000061757 1967 0.986 0.986 - - - - - - - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
69. lrrc40 ENSDARG00000017708 1156 0.98 0.980 - - - - - - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
70. e2f8 ENSDARG00000057323 1432 0.975 0.975 - - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
71. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.973 0.973 - - - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
72. pelo ENSDARG00000055477 1927 0.972 0.972 - - - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
73. wipi1 ENSDARG00000040657 2732 0.97 0.970 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
74. neo1 neo1 4056 0.964 0.964 - - - - - - - -
75. ugt5a5 807 0.959 0.959 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide A5
76. cplx4b ENSDARG00000059486 3192 0.959 0.959 - - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
77. GAS2L1 ENSDARG00000078803 315 0.956 0.956 - - - - - - - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
78. selj 884 0.956 0.956 - - - - - - - - selenoprotein J
79. cp ENSDARG00000010312 1245 0.955 0.955 - - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
80. zgc:153675 ENSDARG00000071555 3769 0.955 0.955 - - - - - - - - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
81. evi5b ENSDARG00000070839 239 0.954 0.954 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
82. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.954 0.954 - - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
83. ttc27 ENSDARG00000007918 1228 0.954 0.954 - - - - - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
84. arhgef12b ENSDARG00000100913 1358 0.952 0.952 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
85. tbc1d19 ENSDARG00000013842 253 0.952 0.952 - - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
86. si:dkey-10f21.16 si:dkey-10f21.16 252 0.952 0.952 - - - - - - - -
87. ENSDARG00000076021 ENSDARG00000076021 162 0.952 0.952 - - - - - - - -
88. kank1 kank1 2430 0.952 0.952 - - - - - - - -
89. ENSDARG00000090222 ENSDARG00000090222 402 0.952 0.952 - - - - - - - -
90. si:ch211-71m22.1 ENSDARG00000058638 169 0.952 0.952 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
91. scarb1 ENSDARG00000101557 503 0.952 0.952 - - - - - - - - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
92. pfkfb3 ENSDARG00000001953 656 0.951 0.951 - - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
93. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.951 0.951 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
94. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.951 0.951 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
95. MRAS_1 ENSDARG00000075285 318 0.951 0.951 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
96. nab1b ENSDARG00000040700 289 0.951 0.951 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
97. IRF2 ENSDARG00000040465 453 0.951 0.951 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
98. ppcs ENSDARG00000061889 224 0.951 0.951 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
99. armc8 ENSDARG00000062258, ENSDARG00000110157 467 0.951 0.951 - - - - - - - - armadillo repeat containing 8 [Source:ZFIN;Acc:ZDB-GENE-061027-88]
100. TTC9 ENSDARG00000074363 196 0.951 0.951 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]

There are 1210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA