Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tram1

Gene Name Gene ID Reads Annotation
tram1 ENSDARG00000019137, ENSDARG00000109629 8309 translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]










Genes with expression patterns similar to tram1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tram1 ENSDARG00000019137, ENSDARG00000109629 8309 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]
2. s100u ENSDARG00000071014 4754 3.311 0.748 0.895 0.850 - - 0.818 - - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
3. dap ENSDARG00000000069, ENSDARG00000114419 13155 3.138 0.744 0.830 - - 0.753 - 0.811 - - death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
4. BX511245.1 ENSDARG00000096871 7523 2.573 0.825 0.942 - - - - 0.806 - -
5. capn9 ENSDARG00000012341 12911 2.445 0.775 0.889 0.781 - - - - - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
6. si:dkey-87o1.2 ENSDARG00000095796 6602 2.359 - 0.782 - - - 0.729 0.848 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
7. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 2.331 0.754 - - - - - 0.828 - 0.749 Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
8. tfa ENSDARG00000016771 30517 2.175 0.701 0.741 - - - - 0.733 - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
9. tspan7 ENSDARG00000015759 13891 1.768 - 0.894 - - - - 0.874 - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
10. c8b ENSDARG00000039517 1731 1.758 - - 0.871 - - - 0.887 - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
11. ywhaqa ENSDARG00000042539 7034 1.743 - 0.855 0.888 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
12. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.7 - 0.850 0.850 - - - - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
13. rbp4l ENSDARG00000044684 3292 1.691 - 0.938 - - - - 0.753 - - retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
14. rbm8a ENSDARG00000016516 8789 1.69 - 0.854 0.836 - - - - - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
15. ppifb ENSDARG00000052842 3533 1.677 - - - - - 0.782 0.895 - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
16. ATOX1 ENSDARG00000087693 4016 1.658 - - 0.861 - - 0.797 - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
17. thoc2 ENSDARG00000037503 8711 1.653 - 0.828 0.825 - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
18. fkbp11 ENSDARG00000037000, ENSDARG00000111059 2888 1.627 - 0.878 - - - - - - 0.749 FK506 binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-030616-357]
19. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 1.626 0.750 - - - - - 0.876 - - kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
20. rab5aa ENSDARG00000018602 8947 1.613 - 0.866 - - - 0.747 - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
21. eif4ebp3l ENSDARG00000041607 5257 1.609 0.858 - - 0.751 - - - - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
22. pla2g12a ENSDARG00000070454 742 1.602 0.772 - - - - 0.830 - - - phospholipase A2, group XIIA [Source:ZFIN;Acc:ZDB-GENE-070410-18]
23. acsl3a ENSDARG00000032079 897 1.602 0.770 - - - - - - - 0.832 acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
24. serpinh1b ENSDARG00000019949 11693 1.601 - 0.821 0.780 - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
25. lmnb2 ENSDARG00000101624 11304 1.598 - 0.791 - - - - 0.807 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
26. fermt1 ENSDARG00000052652 2394 1.598 - - - - - 0.854 0.744 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
27. bambia ENSDARG00000055381 2922 1.587 - 0.835 - - - 0.752 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
28. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.573 0.822 - - - - - 0.751 - - zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
29. zgc:92380 ENSDARG00000041339 1867 1.572 - - - - - - 0.759 - 0.813 zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
30. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.568 0.711 0.857 - - - - - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
31. id3 ENSDARG00000054823 3484 1.559 0.746 0.813 - - - - - - - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
32. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.559 0.717 - 0.842 - - - - - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
33. APOB_1 APOB_1 2217 1.557 0.743 - - - - - 0.814 - -
34. dnajb12a ENSDARG00000039363 1072 1.553 - - - - - - - 0.708 0.845 DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
35. ARHGAP23 ARHGAP23 3946 1.552 0.747 - - - - - 0.805 - -
36. si:dkey-193p11.2 ENSDARG00000096712 3500 1.55 - 0.829 - - - - 0.721 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
37. fbxo28 ENSDARG00000027159 9602 1.538 - - - - - 0.780 - - 0.758 F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
38. sec61a1 ENSDARG00000021669 20408 1.531 0.828 - - - - - 0.703 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
39. slc27a2a ENSDARG00000036237 166 1.526 0.708 - - - - 0.818 - - - solute carrier family 27 (fatty acid transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-050706-104]
40. sc:d173 sc:d173 1279 1.523 - - - - - - 0.715 - 0.808
41. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.519 - - - - - 0.762 0.757 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
42. myo1c myo1c 4978 1.519 - 0.796 - - - - 0.723 - -
43. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.513 0.799 - - - - 0.714 - - - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
44. serpina1l ENSDARG00000090850 10625 1.509 - - - - - 0.729 0.780 - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
45. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.5 - - - - - 0.769 0.731 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
46. sfxn5b ENSDARG00000026137 815 1.489 0.723 - - - - 0.766 - - - sideroflexin 5b [Source:ZFIN;Acc:ZDB-GENE-050706-107]
47. FAM110D FAM110D 3632 1.484 - 0.782 - - - - 0.702 - -
48. btbd10b ENSDARG00000020252 7251 1.478 - - - 0.768 - 0.710 - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
49. arhgef1b ENSDARG00000055837 2330 1.468 - - - 0.738 - - - - 0.730 Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
50. prrx1b ENSDARG00000042027 1128 1.467 - - - - - 0.732 - - 0.735 paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
51. arpc5a ENSDARG00000039142 5482 1.465 0.724 - - - - - - - 0.741 actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
52. lamp2 ENSDARG00000014914 5035 1.464 0.761 - - - - 0.703 - - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
53. alox12 ENSDARG00000069463 5787 1.464 0.718 - - - - - 0.746 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
54. serhl ENSDARG00000032340 1241 1.463 - - - - - 0.714 - - 0.749 serine hydrolase-like [Source:ZFIN;Acc:ZDB-GENE-030131-1368]
55. PHTF1 PHTF1 1029 1.462 - - - - - - - 0.701 0.761
56. STYK1 108 1.458 0.723 - - - - 0.735 - - - serine/threonine/tyrosine kinase 1
57. pgam1a ENSDARG00000005423 3986 1.441 0.722 - - - - - 0.719 - - phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
58. fetub ENSDARG00000053973 43520 1.44 - - - - - 0.700 0.740 - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
59. fam20a ENSDARG00000079486 1199 1.436 0.702 - - - - - 0.734 - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
60. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.432 0.708 - - - - - 0.724 - - glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
61. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.427 - - - 0.707 - - - - 0.720 cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
62. si:ch211-117m20.5 ENSDARG00000091996 7246 1.42 - - - - - 0.708 0.712 - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
63. cnn2 ENSDARG00000035858 18201 1.42 0.701 - - - - - 0.719 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
64. bysl ENSDARG00000001057 2621 0.961 - - 0.961 - - - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
65. copz1 ENSDARG00000017844 7277 0.954 - 0.954 - - - - - - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
66. b3gnt2b ENSDARG00000091902 4125 0.944 - 0.944 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
67. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 0.937 - - - - - - 0.937 - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
68. arrdc3b ENSDARG00000036028 3157 0.932 - 0.932 - - - - - - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
69. bcar1 ENSDARG00000056525 6563 0.921 - - 0.921 - - - - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
70. maff ENSDARG00000028957, ENSDARG00000111050 1809 0.915 - - 0.915 - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
71. si:ch211-11k18.4 ENSDARG00000087869 3298 0.913 - - 0.913 - - - - - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
72. xbp1 ENSDARG00000035622 18416 0.911 - - 0.911 - - - - - - X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
73. chmp4b chmp4b 5318 0.91 - - 0.910 - - - - - -
74. grb2b ENSDARG00000038059 9050 0.907 - 0.907 - - - - - - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
75. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 0.901 - - - - - - - - 0.901 solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
76. ssr4 ENSDARG00000019444 20207 0.898 - - - - - 0.898 - - - signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
77. ACVR2B 6615 0.896 - - 0.896 - - - - - - activin A receptor, type IIB
78. adpgk2 ENSDARG00000062785 8229 0.893 - - - - - - 0.893 - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
79. si:dkey-33i11.4 ENSDARG00000099117 8342 0.893 - - - - - - 0.893 - - si:dkey-33i11.4 [Source:ZFIN;Acc:ZDB-GENE-030131-33]
80. kdelr2a ENSDARG00000005254 13871 0.892 - - - - - - 0.892 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
81. si:dkey-69o16.5 ENSDARG00000070057 3628 0.886 - - - - - - 0.886 - - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
82. ywhaz ENSDARG00000032575 15257 0.879 - - 0.879 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
83. mpzl3 959 0.878 - - - - - - - - 0.878 myelin protein zero-like 3
84. arid3b ENSDARG00000104034 16303 0.878 - - - - - - 0.878 - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
85. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 0.876 - - - - - - - - 0.876 EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
86. PHLDB1 PHLDB1 3821 0.875 - - 0.875 - - - - - -
87. eif5 ENSDARG00000003681 7986 0.874 - 0.874 - - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
88. FBXO46 ENSDARG00000099814 722 0.874 - - - - - - - - 0.874 F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
89. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 0.874 - - - - - - 0.874 - - regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
90. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 0.873 - 0.873 - - - - - - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
91. zgc:195282 ENSDARG00000079488 475 0.872 - - 0.872 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
92. coa5 ENSDARG00000094833 1988 0.872 - - 0.872 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
93. hoxc13a ENSDARG00000070353 4815 0.872 - - 0.872 - - - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
94. elavl3 ENSDARG00000014420 8644 0.871 - - 0.871 - - - - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
95. PKP3 PKP3 391 0.871 - - 0.871 - - - - - -
96. si:ch73-303g23.4 si:ch73-303g23.4 386 0.871 - - 0.871 - - - - - -
97. pih1d2 ENSDARG00000014849 389 0.871 - - 0.871 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
98. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.871 - - 0.871 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
99. CU638868.1 ENSDARG00000115797 487 0.871 - - 0.871 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
100. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.871 - - 0.871 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]

There are 1005 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA