Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for traip

Gene Name Gene ID Reads Annotation
traip ENSDARG00000011262 410 TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]










Genes with expression patterns similar to traip

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. traip ENSDARG00000011262 410 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
2. ENSDARG00000023499 ENSDARG00000023499 395 2.375 - 0.807 - - - 0.752 0.816 - -
3. ndst3 ENSDARG00000041776 605 2.285 - 0.758 - - - 0.763 0.764 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
4. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 2.182 - - - - - 0.747 0.708 0.727 - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
5. si:ch73-346m18.6 si:ch73-346m18.6 40 1.855 0.908 0.947 - - - - - - -
6. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.837 - 0.904 - - - 0.933 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
7. zgc:110821 ENSDARG00000077085 210 1.8 - - - - - 0.913 - 0.887 - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
8. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.759 - 0.947 - - - 0.812 - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
9. immp2l ENSDARG00000004925 215 1.758 0.872 0.886 - - - - - - - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
10. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.753 - 0.967 - - - 0.786 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
11. si:dkey-264b2.3 19 1.745 - 0.925 - - - 0.820 - - - si:dkey-264b2.3, transcript variant X2
12. si:dkey-100h21.2 si:dkey-100h21.2 30 1.738 0.791 0.947 - - - - - - -
13. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.738 0.791 0.947 - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
14. ITIH4 ITIH4 9 1.732 0.781 0.951 - - - - - - -
15. adamts8a ENSDARG00000007709 75 1.714 0.812 - - - - 0.902 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
16. retsatl ENSDARG00000034989 41 1.706 - 0.906 - - - 0.800 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
17. nsmce1 ENSDARG00000098780 289 1.699 - 0.862 - - - - - 0.837 - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
18. PEG3_22 PEG3_22 33 1.696 0.783 0.913 - - - - - - -
19. mtfr1 ENSDARG00000045304 277 1.689 - 0.833 - - - - 0.856 - - mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
20. CU638738.1 CU638738.1 131 1.689 - 0.893 - - - 0.796 - - -
21. TTBK2 TTBK2 303 1.688 - 0.913 - - - - 0.775 - -
22. SNORA62 SNORA62 39 1.674 0.791 0.883 - - - - - - -
23. PEG3_40 PEG3_40 186 1.67 - 0.867 - - - 0.803 - - -
24. dbpa ENSDARG00000063014 107 1.666 - 0.925 - - - 0.741 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
25. CT030046.1 CT030046.1 190 1.65 - 0.947 - - - 0.703 - - -
26. trnt1 ENSDARG00000075297, ENSDARG00000116975 366 1.648 - - - - - 0.883 0.765 - - tRNA nucleotidyl transferase, CCA-adding, 1 [Source:ZFIN;Acc:ZDB-GENE-040625-176]
27. fbxo15 ENSDARG00000016897 18 1.645 0.719 0.926 - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
28. tmem160 ENSDARG00000069649 587 1.644 - - - - - - 0.837 0.807 - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
29. CABZ01049057.1 CABZ01049057.1 479 1.644 - - - - - 0.851 - 0.793 -
30. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 1.637 0.812 0.825 - - - - - - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
31. CABZ01073795.1 ENSDARG00000010729 52 1.634 - 0.725 - - - 0.909 - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
32. si:ch211-163b2.4 ENSDARG00000094890 140 1.633 - - - - - 0.797 0.836 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
33. sema3fa ENSDARG00000011163 759 1.631 - 0.847 - - - - 0.784 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
34. LSM5 ENSDARG00000071573 371 1.631 - 0.889 - - - 0.742 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
35. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.628 - 0.789 - - - - 0.839 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
36. il17rd ENSDARG00000098359 1153 1.626 - - - - - 0.787 - 0.839 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
37. BACH1 BACH1 1021 1.625 - 0.895 - - - 0.730 - - -
38. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.623 - - - - - 0.803 0.820 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
39. DRD5 DRD5 142 1.621 - 0.866 - - - - - 0.755 -
40. CU856359.2 CU856359.2 182 1.619 - - - - - 0.718 - 0.901 -
41. ZNF408 ENSDARG00000036043 232 1.617 0.719 - - - - - - 0.898 - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
42. ADCK2 ENSDARG00000073923 129 1.614 0.810 0.804 - - - - - - - aarF domain containing kinase 2 [Source:ZFIN;Acc:ZDB-GENE-131121-369]
43. atg10 ENSDARG00000104846 85 1.612 0.851 - - - - 0.761 - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
44. cuedc2 ENSDARG00000039365 484 1.611 - 0.839 - - - - - - 0.772 CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
45. vhll ENSDARG00000078613 87 1.608 0.816 - - - - - - 0.792 - von Hippel-Lindau tumor suppressor like [Source:ZFIN;Acc:ZDB-GENE-081022-78]
46. mtx3 ENSDARG00000090195 42 1.608 - 0.875 - - - - 0.733 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
47. LIN9 ENSDARG00000028475 227 1.605 - - - - - 0.767 0.838 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
48. agps ENSDARG00000042821 203 1.604 - - - - - - 0.764 0.840 - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
49. KIF21A_1 KIF21A_1 237 1.602 - 0.828 - - - 0.774 - - -
50. si:ch211-74m13.3 ENSDARG00000076144 55 1.6 - 0.873 - - - - 0.727 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
51. si:ch211-223f7.1 si:ch211-223f7.1 38 1.598 0.791 - - - - 0.807 - - -
52. angptl5 ENSDARG00000056630 203 1.596 0.862 - - - - 0.734 - - - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
53. si:dkey-247i3.3 si:dkey-247i3.3 297 1.594 - 0.836 - 0.758 - - - - -
54. naif1 ENSDARG00000062753 176 1.593 - 0.854 - - - 0.739 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
55. snrnp25 ENSDARG00000020363 588 1.593 - - - - - - 0.848 0.745 - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
56. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 1.589 - 0.728 - - - - - 0.861 - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
57. otud4 ENSDARG00000077810 120 1.585 - 0.811 - - - - 0.774 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
58. CR388231.1 ENSDARG00000098710 153 1.582 - 0.821 - - - 0.761 - - -
59. dnm3 dnm3 45 1.581 0.791 - - - - 0.790 - - -
60. CU013533.1 CU013533.1 108 1.577 0.791 - - - - 0.786 - - -
61. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.573 - 0.793 - - - 0.780 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
62. NRBP2 NRBP2 127 1.565 0.828 - - - - 0.737 - - -
63. morc3a ENSDARG00000056679 648 1.564 - - - - - 0.795 - 0.769 - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
64. fabp11a_1 ENSDARG00000017299 387 1.556 - 0.802 - - - 0.754 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
65. cyp27a7 ENSDARG00000033802 216 1.556 - - - - - 0.826 - 0.730 - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
66. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 1.553 - - - 0.730 - 0.823 - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
67. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.552 - 0.843 - - - 0.709 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
68. asun 483 1.548 - - - - - 0.754 - 0.794 - asunder, spermatogenesis regulator homolog (Drosphila), transcript variant X1
69. mcmbp ENSDARG00000055314 731 1.543 - 0.769 - 0.774 - - - - - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
70. TESK1 TESK1 109 1.542 0.779 - - - - 0.763 - - -
71. eif3hb ENSDARG00000036116 203 1.539 - - - - - 0.791 0.748 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
72. chek1 ENSDARG00000104765 1029 1.537 - - - 0.735 - - 0.802 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
73. si:ch211-106g4.2 si:ch211-106g4.2 6 1.532 0.791 - - - - - 0.741 - -
74. pop4 ENSDARG00000101472, ENSDARG00000112497 749 1.529 - - - - - - 0.742 0.787 - POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]
75. EHBP1 ENSDARG00000043643 966 1.521 - - - - - 0.771 - 0.750 - EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
76. ABTB1 ENSDARG00000063354 383 1.52 0.774 - - - - - - 0.746 - ankyrin repeat and BTB (POZ) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-141212-241]
77. reps1 ENSDARG00000002877 962 1.52 - 0.702 - - - - - 0.818 - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
78. rwdd2b ENSDARG00000055426 294 1.518 - 0.777 - - - - 0.741 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
79. GID4 ENSDARG00000079482 1375 1.516 - - - - - 0.816 0.700 - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
80. slc30a10 ENSDARG00000103983 46 1.516 - - - - - 0.766 0.750 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
81. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.513 - 0.757 - - - 0.756 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
82. si:dkey-45d16.4 72 1.509 0.733 - - - - 0.776 - - - si:dkey-45d16.4
83. si:ch1073-357b18.4 ENSDARG00000096602 121 1.506 0.744 - - - - 0.762 - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
84. ubp1 ENSDARG00000018000 1047 1.5 - - - - - 0.781 - - 0.719 upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
85. slc7a3a ENSDARG00000020645 1458 1.499 - - - - - 0.770 - 0.729 - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
86. tbcela ENSDARG00000002682 1179 1.497 - - - - - 0.706 0.791 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
87. ARHGAP23 ARHGAP23 3946 1.491 - - - - - 0.728 - 0.763 -
88. fam46a fam46a 92 1.489 0.713 - - - - - 0.776 - -
89. nrcam nrcam 397 1.488 0.724 - - - - 0.764 - - -
90. ca16b ENSDARG00000060123 389 1.488 - - - - - 0.786 - - 0.702 carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
91. tbc1d2b ENSDARG00000061986 247 1.488 - - - 0.743 - - - 0.745 - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
92. cdk10 ENSDARG00000034256 166 1.487 - - - - - 0.729 0.758 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
93. fem1b ENSDARG00000062636 474 1.486 - - - - - 0.736 0.750 - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
94. si:ch211-162i8.5 ENSDARG00000111716 76 1.485 - - - - - 0.729 0.756 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
95. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.484 - 0.712 - - - 0.772 - - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
96. ZDHHC20 ZDHHC20 366 1.484 - - - - - - 0.717 0.767 -
97. ift57 ENSDARG00000021022 288 1.465 - - - - - 0.723 - 0.742 - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
98. si:ch211-241n15.1 si:ch211-241n15.1 632 1.459 - 0.759 - - - - - 0.700 -
99. b4galt7 ENSDARG00000021899 546 1.451 - 0.717 - - - 0.734 - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
100. ccni2 ENSDARG00000033046 418 1.448 0.715 - - - - 0.733 - - - cyclin I family, member 2 [Source:ZFIN;Acc:ZDB-GENE-081106-2]

There are 1819 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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