Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for traf6

Gene Name Gene ID Reads Annotation
traf6 ENSDARG00000028058 478 TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]










Genes with expression patterns similar to traf6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. traf6 ENSDARG00000028058 478 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
2. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 2.43 - - - - - - 0.732 0.748 0.950 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
3. kcnh6 kcnh6 59 1.801 - 0.867 - 0.934 - - - - -
4. heca ENSDARG00000042877 200 1.731 - - - 0.931 - - - 0.800 - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
5. slc52a3 ENSDARG00000042737 67 1.694 - - - 0.931 - - 0.763 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
6. zgc:153151 ENSDARG00000069563 126 1.685 - 0.807 - - - - - - 0.878 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
7. asb4 ENSDARG00000034988 1115 1.679 - - - 0.923 - - - 0.756 - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
8. per1b ENSDARG00000012499 320 1.67 - - - 0.791 - - - - 0.879 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
9. si:dkey-229b18.3 ENSDARG00000095912 568 1.645 - - - 0.810 - - - 0.835 - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
10. chid1 ENSDARG00000069673 675 1.635 - - - 0.789 - - - - 0.846 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
11. AREL1 ENSDARG00000100359 260 1.635 - - - 0.895 - - - 0.740 - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
12. znf687a ENSDARG00000102774 393 1.634 - 0.759 - 0.875 - - - - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
13. trpc4apb ENSDARG00000020647 670 1.633 - - - 0.772 - - - - 0.861 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
14. swap70a ENSDARG00000051819 115 1.63 - 0.864 - - - - - 0.766 - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
15. tp53i11b ENSDARG00000006025 569 1.626 - - - 0.750 - - - - 0.876 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
16. Mar-02 Mar-02 1812 1.616 - 0.791 - - - - - - 0.825
17. CABZ01039859.1 ENSDARG00000076361 540 1.613 - 0.794 - - - - - - 0.819 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
18. pigu ENSDARG00000075530 348 1.607 - - - 0.882 - - - 0.725 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
19. casp2 ENSDARG00000062052 559 1.606 - - - - - - - 0.730 0.876 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
20. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.599 - 0.750 - - - - - - 0.849 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
21. rad18 ENSDARG00000027938 574 1.599 - - - 0.862 - - - 0.737 - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
22. prkcbb ENSDARG00000022254 319 1.59 - 0.724 - - - - - - 0.866 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
23. zfr2 ENSDARG00000071683 780 1.583 0.706 - - - - - - - 0.877 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
24. BX324198.2 BX324198.2 84 1.57 - - - - - 0.701 0.869 - -
25. zgc:113184 ENSDARG00000098181 500 1.569 - - - - - - - 0.725 0.844 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
26. ptgs1 ENSDARG00000052148 2443 1.569 - 0.724 - - - - - - 0.845 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
27. cry4 ENSDARG00000011890 980 1.565 - - - 0.747 - - - - 0.818 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
28. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1.56 - 0.758 - - - - 0.802 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
29. mitd1 ENSDARG00000044766 182 1.55 - - - - - - 0.776 0.774 - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
30. ITPK1 ITPK1 78 1.545 - - - - - 0.737 0.808 - -
31. zgc:171489 ENSDARG00000052300 119 1.543 - 0.711 - - - - 0.832 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
32. aldh2.2 ENSDARG00000028087 303 1.542 0.704 - - 0.838 - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
33. BX548021.2_1 BX548021.2_1 164 1.54 - 0.758 - - - - 0.782 - -
34. zgc:113100 zgc:113100 647 1.536 0.706 0.830 - - - - - - -
35. AL928724.1 ENSDARG00000097525 421 1.536 - 0.726 - 0.810 - - - - -
36. SUOX ENSDARG00000091574 122 1.535 - 0.709 - - - - - 0.826 - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
37. slc19a2 ENSDARG00000059712 533 1.527 - 0.715 - 0.812 - - - - - solute carrier family 19 (thiamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-262]
38. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.526 - 0.778 - - - - 0.748 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
39. gng12a ENSDARG00000003375 1250 1.523 - 0.780 - - - 0.743 - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
40. klf15 ENSDARG00000091127 1037 1.511 - - - 0.742 - - - - 0.769 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
41. ARHGEF15 ENSDARG00000100293 553 1.507 - - - 0.773 - - - 0.734 - Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
42. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1.499 - - - 0.795 - - 0.704 - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
43. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 1.48 - 0.752 - 0.728 - - - - - si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
44. slka ENSDARG00000061525 1678 1.477 - 0.748 - - - - - - 0.729 STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
45. malt1b malt1b 244 1.472 - 0.714 - - - - - 0.758 -
46. slc24a5 ENSDARG00000024771 107 1.472 - - - - - 0.740 - 0.732 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
47. srp68 ENSDARG00000020820 1719 1.472 - - - - - - 0.701 - 0.771 signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
48. slkb ENSDARG00000012574 1099 1.461 - 0.741 - - - - 0.720 - - STE20-like kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-1684]
49. snx27a ENSDARG00000033804 2249 1.458 - 0.723 - - - - - - 0.735 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
50. hyou1 ENSDARG00000013670 4172 1.456 - 0.717 - - - - - - 0.739 hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
51. HPCAL1 ENSDARG00000022763 2885 1.447 - 0.746 - 0.701 - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
52. rela ENSDARG00000098696 889 1.444 - - - - - - 0.714 0.730 - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
53. angptl6 ENSDARG00000020265 273 0.957 - - - - - - - - 0.957 angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
54. magi3 magi3 962 0.956 - - - - - - - - 0.956
55. yrk ENSDARG00000004378 618 0.946 - - - - - - - - 0.946 Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
56. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.945 - - - 0.945 - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
57. gk5 ENSDARG00000062864 738 0.945 - - - - - - - - 0.945 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
58. ZFAT ENSDARG00000077987 205 0.942 - - - 0.942 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
59. CT025914.2 CT025914.2 53 0.941 - - - 0.941 - - - - -
60. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.941 - - - 0.941 - - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
61. dus3l ENSDARG00000099528 1192 0.941 - - - - - - - - 0.941 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
62. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.94 - - - 0.940 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
63. sorbs3 ENSDARG00000037476 511 0.939 - - - - - - - - 0.939 sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
64. mical1 ENSDARG00000011809 586 0.938 - - - - - - - - 0.938 microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
65. gng13b ENSDARG00000037921 215 0.938 - - - 0.938 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
66. capn7 ENSDARG00000102987 386 0.938 - - - 0.938 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
67. si:dkey-91i10.2 ENSDARG00000074034 334 0.937 - - - - - - - - 0.937 si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
68. gal3st1 gal3st1 108 0.937 - - - 0.937 - - - - -
69. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.937 - - - 0.937 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
70. GALNT3 ENSDARG00000108649 356 0.937 - - - 0.937 - - - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
71. mamdc2b ENSDARG00000073695 26 0.937 - - - 0.937 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
72. asic1b ENSDARG00000101866 61 0.935 - - - 0.935 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
73. CU207301.10 CU207301.10 67 0.935 - - - 0.935 - - - - -
74. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.935 - - - 0.935 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
75. nif3l1 ENSDARG00000045249 28 0.934 - - - 0.934 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
76. slc52a2 ENSDARG00000102035 57 0.933 - - - 0.933 - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
77. BX908793.1 BX908793.1 573 0.932 - - - - - - - - 0.932
78. AL929022.2 AL929022.2 567 0.932 - - - - - - - 0.932 -
79. CNST CNST 540 0.932 - - - 0.932 - - - - -
80. EMILIN3 1347 0.931 - - - - - - - - 0.931 elastin microfibril interfacer 3
81. dlec1 ENSDARG00000075825 60 0.931 - - - 0.931 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
82. tecra ENSDARG00000101585 609 0.93 - - - 0.930 - - - - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
83. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.93 - - - 0.930 - - - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
84. fut11 ENSDARG00000102402 56 0.93 - - - 0.930 - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
85. si:ch211-250m6.8 si:ch211-250m6.8 51 0.929 - - - 0.929 - - - - -
86. etaa1 ENSDARG00000074915 123 0.928 - - - 0.928 - - - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
87. lmx1a ENSDARG00000020354 111 0.928 - - - 0.928 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
88. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.926 - - - 0.926 - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
89. fastkd1 ENSDARG00000056128 141 0.926 - - - 0.926 - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
90. kcnf1a ENSDARG00000027940 155 0.925 - - - 0.925 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
91. csde1 ENSDARG00000074758 172 0.923 - - - 0.923 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
92. CR847510.1 CR847510.1 629 0.923 - - - 0.923 - - - - -
93. mto1 ENSDARG00000055679 859 0.922 - - - - - - - - 0.922 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
94. galnt6 ENSDARG00000014386 1126 0.922 - - - - - - - - 0.922 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
95. igf2bp2a ENSDARG00000003421 2810 0.922 - - - 0.922 - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
96. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.921 - - - 0.921 - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
97. si:ch211-136m16.8 ENSDARG00000090767 91 0.92 - - - 0.920 - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
98. TOR4A TOR4A 70 0.919 - - - 0.919 - - - - -
99. CABZ01086354.1_1 CABZ01086354.1_1 89 0.919 - - - 0.919 - - - - -
100. mgmt ENSDARG00000043275, ENSDARG00000111616 169 0.918 - - - 0.918 - - - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]

There are 1349 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA