Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for traf4a

Gene Name Gene ID Reads Annotation
traf4a ENSDARG00000003963, ENSDARG00000109586 1595 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]










Genes with expression patterns similar to traf4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
2. CR954145.1 CR954145.1 327 2.435 - - - - - 0.730 0.761 - 0.944
3. grasp ENSDARG00000000588, ENSDARG00000113330 766 2.365 - - - - - 0.723 0.706 - 0.936 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
4. rad21a ENSDARG00000006092 393 2.138 - - - 0.710 - 0.705 0.723 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
5. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 1.78 - - - - - - 0.828 - 0.952 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
6. prpf6 ENSDARG00000091367 1868 1.775 - 0.853 - - - - - - 0.922 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
7. MIS12 ENSDARG00000026454 649 1.737 - - - - - 0.781 - - 0.956 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
8. trpc4apb ENSDARG00000020647 670 1.731 - - - - - 0.777 - - 0.954 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
9. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.729 - - - - - - 0.812 - 0.917 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
10. gas2l3 ENSDARG00000045880 614 1.723 - - - - - - 0.786 - 0.937 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
11. CT030712.1 ENSDARG00000044355 83 1.719 - - - - - 0.770 - - 0.949 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
12. dnajc10 ENSDARG00000074727 1523 1.713 - - - - - 0.798 - - 0.915 DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
13. rangap1a ENSDARG00000041317 1456 1.705 - - - - - 0.814 - - 0.891 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
14. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.705 - - - - - 0.754 - - 0.951 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
15. CABZ01032467.1 CABZ01032467.1 400 1.7 - - - - - - 0.768 - 0.932
16. abcb7 ENSDARG00000062795 1404 1.7 - - - - - 0.792 - - 0.908 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
17. ttyh2 ENSDARG00000016934 1868 1.695 - - - - - 0.749 - - 0.946 tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
18. endog ENSDARG00000058865 679 1.695 - - - - - 0.747 - - 0.948 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
19. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.694 - - - - - 0.759 - - 0.935 ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
20. tbx18 ENSDARG00000036930 390 1.693 - - - - 0.749 - - - 0.944 T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
21. FP236810.2 ENSDARG00000113218 140 1.688 - - - - - - 0.753 - 0.935 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
22. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.684 - - - - - 0.759 - - 0.925 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
23. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.682 - - - - - 0.817 - - 0.865 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
24. rarab ENSDARG00000034893, ENSDARG00000111757 2151 1.676 - - - - - - 0.754 - 0.922 retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
25. cuedc1b ENSDARG00000054748 1638 1.661 - - - - - 0.701 - - 0.960 CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
26. GRAMD2 GRAMD2 300 1.654 - - - - - 0.714 - - 0.940
27. CU571162.1 CU571162.1 652 1.652 - - - - - - 0.721 - 0.931
28. CLINT1 CLINT1 558 1.651 - - - 0.737 - - - - 0.914
29. BX569781.3 BX569781.3 576 1.65 - - - 0.705 - - - - 0.945
30. nf2b ENSDARG00000025567 1441 1.646 - - - - - 0.729 - - 0.917 neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
31. MYADML2 ENSDARG00000053953 810 1.646 - - - - - 0.803 - - 0.843 myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
32. ctnnbl1 ENSDARG00000011958 2276 1.645 - 0.791 - - - - - - 0.854 catenin, beta like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1850]
33. nop16 ENSDARG00000044402 3645 1.638 - - - - - - 0.791 - 0.847 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
34. PACS1 PACS1 2061 1.634 - - - - - - 0.722 - 0.912
35. srp68 ENSDARG00000020820 1719 1.632 - - - - - 0.735 - - 0.897 signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
36. sall4 ENSDARG00000044485 1694 1.625 - - - - - 0.760 - - 0.865 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
37. C1H10orf12 C1H10orf12 1663 1.615 - - - - - 0.805 - - 0.810
38. pdxdc1 ENSDARG00000101886 1958 1.612 - 0.797 - - - - - - 0.815 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
39. si:dkey-117n7.3 ENSDARG00000092944 2518 1.607 - - - - - - 0.730 - 0.877 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
40. CYTH2 ENSDARG00000028800 2349 1.605 - 0.793 - - - 0.812 - - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
41. fkbp4 ENSDARG00000008447 3736 1.603 - 0.720 - - - - - - 0.883 FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
42. BACH1 BACH1 1021 1.603 - - - - - 0.701 - - 0.902
43. SLC27A2_1 SLC27A2_1 974 1.602 - - - - - - 0.716 - 0.886
44. adrbk2 1037 1.597 - 0.717 - - - - - - 0.880 adrenergic, beta, receptor kinase 2, transcript variant X1
45. SGTA ENSDARG00000019941 2959 1.594 - 0.777 - - - - - - 0.817 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
46. slka ENSDARG00000061525 1678 1.586 - - - - - - 0.731 - 0.855 STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
47. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.57 - - - - - 0.801 0.769 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
48. camlg ENSDARG00000100409 2157 1.554 - - - 0.850 - 0.704 - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
49. gnsa ENSDARG00000023766 545 1.553 - - - 0.702 - 0.851 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
50. olfm1a ENSDARG00000018270 107 1.552 - - - 0.754 - 0.798 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
51. CR387996.1 ENSDARG00000097774 3037 1.548 - - - - - 0.708 - - 0.840
52. mn1b ENSDARG00000079248 882 1.548 0.788 - - - - 0.760 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
53. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.542 0.700 - - - - - - - 0.842 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
54. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.541 - - - 0.709 - 0.832 - - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
55. fgfrl1b ENSDARG00000052556, ENSDARG00000110034 240 1.541 - - - - - 0.786 0.755 - - fibroblast growth factor receptor like 1b [Source:ZFIN;Acc:ZDB-GENE-050201-3]
56. CDC42BPA CDC42BPA 295 1.538 - - - - - 0.754 0.784 - -
57. hiat1b ENSDARG00000043055 757 1.538 - - - - - 0.820 0.718 - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
58. casc3 ENSDARG00000029911 1174 1.536 - 0.701 - - - 0.835 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
59. ROBO3_1 ROBO3_1 468 1.533 - - - 0.766 - 0.767 - - -
60. pycr1 pycr1 1258 1.528 - - - - - 0.809 0.719 - -
61. fam110b ENSDARG00000088073 420 1.526 - - - 0.757 - 0.769 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
62. rad21b ENSDARG00000035655 87 1.52 - - - - - 0.803 0.717 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
63. CABZ01073424.1 ENSDARG00000107858 688 1.519 - 0.757 - - - - 0.762 - -
64. hsp70l_1 ENSDARG00000055723 72 1.517 - - - 0.736 - 0.781 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
65. zgc:171566 ENSDARG00000105118 340 1.515 - - - - - 0.802 0.713 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
66. ash2l ENSDARG00000060392 4916 1.513 - - - - - 0.754 - - 0.759 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
67. dctn4 ENSDARG00000023988 860 1.513 - 0.798 - - - 0.715 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
68. VSTM2B VSTM2B 149 1.512 - - - 0.741 - 0.771 - - -
69. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 1.51 - - - - - 0.728 0.782 - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
70. ercc5 ENSDARG00000023678 468 1.507 0.713 - - - - - 0.794 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
71. ryk ENSDARG00000007231 1611 1.507 - - - - - 0.795 0.712 - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
72. fam53b ENSDARG00000016156 2143 1.501 - - - - - 0.725 - - 0.776 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
73. parp6a ENSDARG00000042703 112 1.494 - - - 0.726 - 0.768 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
74. poglut1 ENSDARG00000053463 738 1.492 - - - - - 0.761 0.731 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
75. tes ENSDARG00000051857 2020 1.486 - - - - - 0.724 - - 0.762 testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
76. RNF38 ENSDARG00000062055 3901 1.483 - 0.744 - - - 0.739 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
77. otpa ENSDARG00000014201 2290 1.478 0.732 - - - - 0.746 - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
78. lancl1 ENSDARG00000013741 563 1.476 - - - - - 0.722 0.754 - - LanC antibiotic synthetase component C-like 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040924-1]
79. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.475 - - - - - 0.726 - - 0.749
80. tbc1d5 ENSDARG00000036212 2580 1.473 - - - - - 0.705 - - 0.768 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
81. pum1 ENSDARG00000099256 5017 1.464 - - - - - 0.702 0.762 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
82. scaf4a ENSDARG00000077093 2408 1.457 - - - 0.712 - - - - 0.745 SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
83. actr5 ENSDARG00000098235 237 1.456 - - - 0.724 - 0.732 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
84. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.453 - 0.722 - - - - - - 0.731 VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
85. ints8 ENSDARG00000057986 1063 1.453 - 0.719 - - - - 0.734 - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
86. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.444 - - - - - 0.737 0.707 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
87. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.437 - - - - - 0.734 - 0.703 - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
88. cacnb4b ENSDARG00000062174 159 1.432 0.705 - - - - 0.727 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
89. rbp7b ENSDARG00000070486, ENSDARG00000111858 449 1.429 - - - - - 0.714 0.715 - - retinol binding protein 7b, cellular [Source:ZFIN;Acc:ZDB-GENE-081022-134]
90. BX649554.3 BX649554.3 949 1.421 0.711 - - - - 0.710 - - -
91. ubap2l ENSDARG00000063219 1147 0.97 - - - - - - - - 0.970 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
92. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.965 - - - - - - - - 0.965 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
93. ide ENSDARG00000075570 4331 0.963 - - - - - - - - 0.963 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
94. pank4 ENSDARG00000098453, ENSDARG00000114951 662 0.961 - - - - - - - - 0.961 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
95. mto1 ENSDARG00000055679 859 0.961 - - - - - - - - 0.961 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
96. nfs1 ENSDARG00000062237 2741 0.959 - - - - - - - - 0.959 NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
97. znf362 znf362 869 0.958 - - - - - - - - 0.958
98. tcea2 ENSDARG00000012927 440 0.958 - - - - - - - - 0.958 transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
99. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.957 - - - - - - - - 0.957 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
100. mlx ENSDARG00000037891 433 0.955 - - - - - - - - 0.955 MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]

There are 2035 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA