Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for traf3ip1

Gene Name Gene ID Reads Annotation
traf3ip1 ENSDARG00000010300 69 TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]










Genes with expression patterns similar to traf3ip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. traf3ip1 ENSDARG00000010300 69 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
2. SPDEF ENSDARG00000029930 60 2.362 - 0.702 - - - 0.866 0.794 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
3. ptprua ENSDARG00000092638 479 1.774 - - - - - 0.955 0.819 - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
4. PLEKHS1_2 PLEKHS1_2 21 1.749 - - - - - 0.955 0.794 - -
5. gabrr2b ENSDARG00000014057 9 1.749 - - - - - 0.955 0.794 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
6. si:ch211-131e11.16 si:ch211-131e11.16 111 1.729 - - - - 0.868 0.861 - - -
7. STARD10 ENSDARG00000097718 181 1.714 - 0.795 - - - 0.919 - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
8. CR677591.1 CR677591.1 19 1.694 - - - - - 0.955 0.739 - -
9. si:dkey-7a20.9 si:dkey-7a20.9 154 1.683 - - - - - 0.817 0.866 - -
10. fbln5 ENSDARG00000039273 105 1.665 - - - - 0.731 0.934 - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
11. zgc:174696 ENSDARG00000110658 67 1.658 - 0.703 - - - 0.955 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
12. vwa2 ENSDARG00000075441 44 1.651 - - - - - 0.942 - 0.709 - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
13. fopnl ENSDARG00000071198 1002 1.646 - - - - 0.743 0.903 - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
14. si:dkey-7e14.3 ENSDARG00000086055 50 1.637 - - - - - 0.889 0.748 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
15. antxr1a ENSDARG00000025672 32 1.634 - - - - 0.741 0.893 - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
16. lrwd1 ENSDARG00000035147 464 1.626 - 0.750 - - - 0.876 - - - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
17. CR391977.3 CR391977.3 76 1.622 - - - - - 0.883 0.739 - -
18. nxpe3 ENSDARG00000061690 60 1.611 - 0.870 - - - 0.741 - - - neurexophilin and PC-esterase domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-061013-214]
19. oprk1 ENSDARG00000006894 43 1.599 - - - - - 0.828 0.771 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
20. zgc:171727 ENSDARG00000105781 350 1.593 - 0.756 - - - 0.837 - - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
21. si:dkey-180p18.9 381 1.591 - 0.885 - - - - 0.706 - - si:dkey-180p18.9
22. tbx18 ENSDARG00000036930 390 1.571 - - - - - 0.816 0.755 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
23. si:dkey-253d23.11 ENSDARG00000079236 128 1.566 - - - - - 0.746 0.820 - - si:dkey-253d23.11 [Source:ZFIN;Acc:ZDB-GENE-050208-631]
24. cdc23 ENSDARG00000044484 767 1.545 - - - - - 0.755 0.790 - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
25. zgc:154075 ENSDARG00000067630 284 1.517 - 0.813 - - - 0.704 - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
26. fancf ENSDARG00000019250 111 1.505 0.704 - - - - - 0.801 - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
27. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 1.486 - 0.769 - - - 0.717 - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
28. cyp46a1 cyp46a1 43 1.479 - 0.761 - - - - 0.718 - -
29. FMN1_2 FMN1_2 305 1.464 - 0.750 - - - 0.714 - - -
30. ENSDARG00000092910 ENSDARG00000092910 44 1 - - - - - - 1.000 - -
31. bmp6 ENSDARG00000015686 211 1 - - - - - - 1.000 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
32. si:dkey-10p5.7 26 1 - - - - - - 1.000 - - si:dkey-10p5.7
33. WNK3 WNK3 36 1 - - - - - - 1.000 - -
34. kcnt1 ENSDARG00000079484 45 1 - - - - - - 1.000 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
35. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.992 - - - - - 0.992 - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
36. osgin2 ENSDARG00000040302 45 0.992 - - - - - - 0.992 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
37. BX569789.4 BX569789.4 3 0.979 - - - - - 0.979 - - -
38. BX914198.1 BX914198.1 5 0.979 - - - - - 0.979 - - -
39. UNC13C 119 0.975 - - - - - 0.975 - - - unc-13 homolog C (C. elegans)
40. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.975 - - - - - 0.975 - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
41. si:dkeyp-14d3.1 66 0.975 - - - - - 0.975 - - - si:dkeyp-14d3.1, transcript variant X4
42. camk2b1 ENSDARG00000011065 79 0.967 - - - - - 0.967 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
43. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.966 - - - - - 0.966 - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
44. adcy8 ENSDARG00000031783 29 0.962 - - - - - 0.962 - - - adenylate cyclase 8 (brain) [Source:ZFIN;Acc:ZDB-GENE-070912-197]
45. si:ch211-63o20.7 ENSDARG00000042000 93 0.96 - - - - - - 0.960 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
46. si:ch211-152p11.8 46 0.96 - - - - - - 0.960 - - si:ch211-152p11.8, transcript variant X2
47. si:ch73-60p2.1 si:ch73-60p2.1 21 0.96 - - - - - - 0.960 - -
48. NFATC4 ENSDARG00000054162 44 0.96 - - - - - - 0.960 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
49. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 0.96 - - - - - - 0.960 - - toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
50. dio2 ENSDARG00000094857 17 0.96 - - - - - - 0.960 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
51. kcnip3a ENSDARG00000034229 63 0.96 - - - - - - 0.960 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
52. mctp1b ENSDARG00000060871 20 0.96 - - - - - - 0.960 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
53. CU104700.1 CU104700.1 114 0.958 - - - - - 0.958 - - -
54. pou5f3 ENSDARG00000044774 212 0.958 - - - - - 0.958 - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
55. CCDC23 CCDC23 54 0.957 - - - - - 0.957 - - -
56. tnxb 30 0.957 - - - - - 0.957 - - - tenascin XB
57. ches1 ENSDARG00000043553 96 0.957 - - - - - 0.957 - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
58. tmem196b ENSDARG00000090140 20 0.955 - - - - - 0.955 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
59. si:dkey-9i23.6 ENSDARG00000094678 58 0.955 - - - - - 0.955 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
60. SDSL ENSDARG00000074698 34 0.955 - - - - - 0.955 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
61. CABZ01085657.1 CABZ01085657.1 23 0.955 - - - - - 0.955 - - -
62. sybu ENSDARG00000060112 22 0.955 - - - - - 0.955 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
63. si:dkey-94e7.2 ENSDARG00000068474 14 0.955 - - - - - 0.955 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
64. CR790363.1 ENSDARG00000097364 145 0.955 - - - - - 0.955 - - -
65. PLEKHG3 72 0.955 - - - - - 0.955 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
66. rpn2 ENSDARG00000009724 322 0.955 - - - - - 0.955 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
67. SLC1A7 SLC1A7 3 0.955 - - - - - 0.955 - - -
68. neurod6b ENSDARG00000020794 164 0.955 - - - - - 0.955 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
69. trpc2 trpc2 10 0.955 - - - - - 0.955 - - -
70. BX004785.2 ENSDARG00000093487 10 0.955 - - - - - 0.955 - - -
71. itln3 ENSDARG00000003523 3 0.955 - - - - - 0.955 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
72. CT583679.1 CT583679.1 11 0.955 - - - - - 0.955 - - -
73. iffo1a ENSDARG00000062976 5 0.955 - - - - - 0.955 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
74. scospondin ENSDARG00000067859 4 0.955 - - - - - 0.955 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
75. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.955 - - - - - 0.955 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
76. 5_8S_rRNA 5_8S_rRNA 24 0.955 - - - - - 0.955 - - -
77. si:ch211-212k5.2 si:ch211-212k5.2 152 0.955 - - - - - 0.955 - - -
78. CABZ01118004.1 ENSDARG00000117218 2 0.955 - - - - - 0.955 - - -
79. si:dkey-229d11.3 ENSDARG00000093255 41 0.955 - - - - - 0.955 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
80. bend5 ENSDARG00000075624 10 0.955 - - - - - 0.955 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
81. 5S_rRNA_23 5S_rRNA_23 2 0.955 - - - - - 0.955 - - -
82. nkiras2_1 ENSDARG00000052594 31 0.955 - - - - - 0.955 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
83. pip5k1cb ENSDARG00000100313 3 0.955 - - - - - 0.955 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
84. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.955 - - - - - 0.955 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
85. slc27a6 ENSDARG00000046053 57 0.955 - - - - - 0.955 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
86. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.955 - - - - - 0.955 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
87. exoc4 ENSDARG00000004336 32 0.955 - - - - - 0.955 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
88. BX005085.3 ENSDARG00000103450 45 0.955 - - - - - 0.955 - - -
89. mxd ENSDARG00000023369 8 0.955 - - - - - 0.955 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
90. SLC2A4RG SLC2A4RG 47 0.955 - - - - - 0.955 - - -
91. pde6c ENSDARG00000100397 49 0.955 - - - - - 0.955 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
92. ssr1 ENSDARG00000101627 151 0.955 - - - - - 0.955 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
93. CABZ01092722.1 CABZ01092722.1 2 0.955 - - - - - 0.955 - - -
94. sowahaa ENSDARG00000077861 3 0.955 - - - - - 0.955 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
95. BX649415.1 BX649415.1 5 0.955 - - - - - 0.955 - - -
96. pde11al ENSDARG00000006151 70 0.955 - - - - - 0.955 - - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
97. C11H1orf116 C11H1orf116 9 0.955 - - - - - 0.955 - - -
98. prdm2a ENSDARG00000090721 11 0.955 - - - - - 0.955 - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
99. si:ch211-215m21.11 si:ch211-215m21.11 2 0.955 - - - - - 0.955 - - -
100. si:dkey-197d18.3 si:dkey-197d18.3 7 0.955 - - - - - 0.955 - - -

There are 1020 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA