Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for traf3

Gene Name Gene ID Reads Annotation
traf3 ENSDARG00000022000 156 TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]










Genes with expression patterns similar to traf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. traf3 ENSDARG00000022000 156 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]
2. ANK1 ANK1 106 1.731 0.891 0.840 - - - - - - -
3. ZNF408 ENSDARG00000036043 232 1.7 0.799 0.901 - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
4. flt1 ENSDARG00000019371, ENSDARG00000111797 128 1.62 - 0.831 - - - - 0.789 - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]
5. MPZL2 MPZL2 31 1.591 0.866 0.725 - - - - - - -
6. fgf10b ENSDARG00000100475 17 1.591 0.866 0.725 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
7. si:ch211-223f7.1 si:ch211-223f7.1 38 1.591 0.866 0.725 - - - - - - -
8. zgc:113385 zgc:113385 297 1.556 0.716 - - - - 0.840 - - -
9. mfng ENSDARG00000042925 104 1.554 0.705 0.849 - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
10. ugt5e1 ENSDARG00000058048 25 1.524 0.799 0.725 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
11. PBX1 PBX1 148 1.44 0.726 0.714 - - - - - - -
12. g6pc3 ENSDARG00000020371 152 1 1.000 - - - - - - - - glucose 6 phosphatase, catalytic, 3 [Source:ZFIN;Acc:ZDB-GENE-061215-19]
13. DBNDD1 DBNDD1 43 1 1.000 - - - - - - - -
14. lgalslb ENSDARG00000055525 18 0.957 0.957 - - - - - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
15. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 0.957 0.957 - - - - - - - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
16. si:dkey-189o20.1 si:dkey-189o20.1 47 0.946 0.946 - - - - - - - -
17. snx33 ENSDARG00000014954 45 0.944 0.944 - - - - - - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
18. si:ch211-254n4.3 ENSDARG00000020292 85 0.939 0.939 - - - - - - - - si:ch211-254n4.3 [Source:ZFIN;Acc:ZDB-GENE-081105-89]
19. ELFN1 ELFN1 59 0.938 0.938 - - - - - - - -
20. HEATR6 ENSDARG00000073686 241 0.937 0.937 - - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
21. ggt5a ENSDARG00000052045 293 0.929 - 0.929 - - - - - - - gamma-glutamyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-080226-1]
22. SYNDIG1 ENSDARG00000100751 165 0.925 0.925 - - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
23. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 0.916 - - - - - - 0.916 - - fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
24. si:ch211-22k7.1 si:ch211-22k7.1 30 0.912 0.912 - - - - - - - -
25. gpr63 ENSDARG00000074540 242 0.907 - 0.907 - - - - - - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
26. nsun3 ENSDARG00000013023 136 0.903 0.903 - - - - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
27. HYAL1 ENSDARG00000059916 134 0.9 0.900 - - - - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
28. pprc1 ENSDARG00000090337 434 0.894 - - - - - - 0.894 - - peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9858]
29. CABZ01085858.1 CABZ01085858.1 355 0.892 - 0.892 - - - - - - -
30. inppl1b ENSDARG00000001442 41 0.884 - - - - - - 0.884 - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
31. pus7 ENSDARG00000031774 195 0.872 0.872 - - - - - - - - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
32. accs ENSDARG00000052124 294 0.87 - 0.870 - - - - - - - 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
33. map4k2l map4k2l 248 0.87 - 0.870 - - - - - - -
34. APEX2 ENSDARG00000008472 7 0.866 0.866 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
35. shpk ENSDARG00000002355 84 0.866 0.866 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
36. si:dkey-284p5.3 ENSDARG00000095638 4 0.866 0.866 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
37. FP085392.1 FP085392.1 12 0.866 0.866 - - - - - - - -
38. MUC5AC_1 MUC5AC_1 381 0.866 0.866 - - - - - - - -
39. si:dkey-56m15.8 ENSDARG00000098426 2 0.866 0.866 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
40. znf142 ENSDARG00000061373 47 0.866 0.866 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
41. lcn15 ENSDARG00000067851 140 0.866 0.866 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
42. si:dkey-102c8.1 si:dkey-102c8.1 85 0.866 - 0.866 - - - - - - -
43. HBQ1 HBQ1 413 0.866 0.866 - - - - - - - -
44. si:dkey-16n15.6 ENSDARG00000095805 18 0.866 0.866 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
45. pias4b ENSDARG00000042215 12 0.866 0.866 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
46. BX571880.1 ENSDARG00000097533 499 0.866 0.866 - - - - - - - -
47. sema6e ENSDARG00000000189 35 0.866 0.866 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
48. zbtb25 ENSDARG00000042383 94 0.866 0.866 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
49. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 0.866 0.866 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
50. ENSDARG00000029805 ENSDARG00000029805 4 0.866 0.866 - - - - - - - -
51. CABZ01080224.1 CABZ01080224.1 1 0.866 0.866 - - - - - - - -
52. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 0.866 0.866 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
53. prf1.3 ENSDARG00000001572 1 0.866 0.866 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
54. si:ch211-155o21.4 ENSDARG00000096567 25 0.866 0.866 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
55. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 0.866 0.866 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
56. si:ch211-73m21.2 si:ch211-73m21.2 5 0.866 0.866 - - - - - - - -
57. rxrga ENSDARG00000005593 342 0.866 0.866 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
58. mpx ENSDARG00000019521 562 0.866 0.866 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
59. fermt3b ENSDARG00000030938 17 0.866 0.866 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
60. cdkn1bb_1 ENSDARG00000054271 5 0.866 0.866 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
61. rac1l ENSDARG00000054649, ENSDARG00000096549 2 0.866 0.866 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
62. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.866 0.866 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
63. si:dkey-30j10.5 ENSDARG00000093186 13 0.866 0.866 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
64. arid5a ENSDARG00000077120 26 0.866 0.866 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
65. gpr39 ENSDARG00000102888 46 0.866 0.866 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
66. FP102192.1 ENSDARG00000101104 32 0.866 0.866 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
67. epm2a ENSDARG00000059044 10 0.866 0.866 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
68. SMCHD1 ENSDARG00000104374 2 0.866 0.866 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
69. dnm3 dnm3 45 0.866 0.866 - - - - - - - -
70. ME1 ENSDARG00000053215 8 0.866 0.866 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
71. si:dkey-256e7.8 ENSDARG00000092022 4 0.866 0.866 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
72. SLC28A2 SLC28A2 21 0.866 0.866 - - - - - - - -
73. ENSDARG00000091766 ENSDARG00000091766 15 0.866 0.866 - - - - - - - -
74. GPBAR1 ENSDARG00000023302 2 0.866 0.866 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
75. HIST1H2BA_1 ENSDARG00000116654 37 0.866 0.866 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
76. SNORA62 SNORA62 39 0.866 0.866 - - - - - - - -
77. snrnp35 ENSDARG00000099913 21 0.866 0.866 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
78. si:dkey-100h21.2 si:dkey-100h21.2 30 0.866 0.866 - - - - - - - -
79. SFT2D2_1 SFT2D2_1 219 0.866 0.866 - - - - - - - -
80. CR749741.2 CR749741.2 15 0.866 0.866 - - - - - - - -
81. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 0.866 0.866 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
82. FP236851.1 FP236851.1 10 0.866 0.866 - - - - - - - -
83. si:dkey-269o24.7 si:dkey-269o24.7 28 0.866 0.866 - - - - - - - -
84. or137-1 ENSDARG00000105789 2 0.866 0.866 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
85. grm3 ENSDARG00000031712, ENSDARG00000110535 30 0.866 0.866 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
86. si:ch211-255g12.8 ENSDARG00000069627 22 0.866 0.866 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
87. CU896555.1 CU896555.1 27 0.866 0.866 - - - - - - - -
88. si:dkey-202i12.5 si:dkey-202i12.5 20 0.866 0.866 - - - - - - - -
89. si:ch211-227p7.5 ENSDARG00000099046 1 0.866 0.866 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
90. si:ch211-106g4.2 si:ch211-106g4.2 6 0.866 0.866 - - - - - - - -
91. card9 ENSDARG00000067672 33 0.866 0.866 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
92. prkacbb_1 ENSDARG00000059125 83 0.866 0.866 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
93. si:ch73-290k24.5 ENSDARG00000076310 39 0.866 0.866 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
94. glrba ENSDARG00000052782, ENSDARG00000117018 4 0.866 0.866 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
95. CU638737.1 CU638737.1 17 0.866 0.866 - - - - - - - -
96. SBK3_1 SBK3_1 21 0.866 0.866 - - - - - - - -
97. NXPH4 11 0.866 0.866 - - - - - - - - neurexophilin 4
98. btk ENSDARG00000004433 106 0.866 0.866 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
99. dock1 ENSDARG00000099093 10 0.866 0.866 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
100. cart1 ENSDARG00000070930 46 0.866 0.866 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]

There are 571 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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