Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tra2a

Gene Name Gene ID Reads Annotation
tra2a ENSDARG00000007863 4449 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]










Genes with expression patterns similar to tra2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tra2a ENSDARG00000007863 4449 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
2. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.328 - - 0.738 0.777 0.969 - - - 0.844 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
3. vps29 ENSDARG00000069521 5599 2.655 - 0.986 - - 0.964 - 0.705 - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
4. KDM6B KDM6B 10265 2.551 - - 0.748 - 0.924 - - - 0.879
5. IM:7163548 IM:7163548 6540 2.507 - - - - 0.948 0.834 - - 0.725
6. hug 4100 2.426 - - - - - 0.757 0.750 - 0.919 HuG, transcript variant X2
7. mcm5 ENSDARG00000019507 6407 2.411 - - - 0.774 0.813 - - 0.824 - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
8. u2af2b ENSDARG00000011740 6946 2.408 - - 0.780 - - - 0.706 - 0.922 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
9. hnrnpk ENSDARG00000018914 8841 2.406 - - - 0.741 0.937 - 0.728 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
10. tmpoa ENSDARG00000007315 3638 2.396 - - - - 0.944 0.737 0.715 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
11. abi2b ENSDARG00000014875 2259 2.386 - - - - - 0.768 0.716 - 0.902 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
12. snrpf ENSDARG00000105037 10241 2.375 - - - 0.739 - 0.902 0.734 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
13. seta ENSDARG00000031495 39977 2.3 - 0.738 - - 0.719 0.843 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
14. palm1b ENSDARG00000007818 2128 2.269 - - - - - 0.728 0.706 - 0.835 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
15. bri3bp ENSDARG00000010108 6295 2.244 - 0.803 - - - 0.723 - - 0.718 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
16. smarcd1 ENSDARG00000019004 6028 2.184 - - - 0.726 - 0.746 0.712 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
17. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.843 - 0.985 - - - - - - 0.858 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
18. plagx ENSDARG00000036855 3768 1.822 - 0.982 - - - - - - 0.840 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
19. lsm1 ENSDARG00000043177 767 1.821 - 0.983 - - - - - - 0.838 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
20. znf207a ENSDARG00000015538 2630 1.816 - - - - 0.951 - - - 0.865 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
21. dido1 ENSDARG00000057940 3819 1.815 - 0.983 - - - - - - 0.832 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
22. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.8 - 0.935 - - 0.865 - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
23. RANBP3 RANBP3 2513 1.797 - - - - 0.972 - - - 0.825
24. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.796 - 0.976 - - - 0.820 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
25. cbx5 ENSDARG00000061187 24026 1.778 - 0.911 - - 0.867 - - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
26. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.778 - - - - 0.974 - - - 0.804 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
27. aimp2 ENSDARG00000018903 5797 1.776 - 0.970 - - 0.806 - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2652]
28. si:ch211-197h24.6 ENSDARG00000091631 1933 1.776 - - 0.799 - 0.977 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
29. sf1 ENSDARG00000008188 5142 1.775 - - - - 0.956 0.819 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
30. stmn1b ENSDARG00000033655 9491 1.773 - - - - 0.938 - - - 0.835 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
31. efnb3b ENSDARG00000042277 5823 1.77 - - - - 0.929 0.841 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
32. plp1a ENSDARG00000103732 3544 1.756 - 0.984 - - - - - - 0.772 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
33. npm1b ENSDARG00000037675 5448 1.746 - 0.983 - - - 0.763 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
34. cenpe ENSDARG00000063385 4428 1.744 - 0.986 - - - - 0.758 - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
35. slit2 ENSDARG00000004246 5277 1.744 - 0.916 - - - - - - 0.828 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
36. irx1b ENSDARG00000056594 2224 1.739 - - - - 0.922 - - - 0.817 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
37. eif4a3 ENSDARG00000102978 16162 1.731 - - - - 0.954 0.777 - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
38. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.73 - - - - 0.963 - 0.767 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
39. grb2b ENSDARG00000038059 9050 1.721 - 0.960 - - - - 0.761 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
40. clasp1a ENSDARG00000010280 1158 1.719 - - - - 0.977 0.742 - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
41. spcs1 ENSDARG00000059298 5327 1.712 - - - - 0.975 - 0.737 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
42. dctn3 ENSDARG00000041363 3351 1.707 - - - - 0.977 - 0.730 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
43. mex3b ENSDARG00000058369 1867 1.705 - - - - - 0.769 - - 0.936 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
44. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.704 - - - - 0.950 - - - 0.754 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
45. ubr2 ENSDARG00000070164 3960 1.704 - - - - 0.952 0.752 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
46. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.7 - - - 0.771 - - - - 0.929 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
47. ck2a1 ck2a1 3749 1.7 - - - - 0.973 - 0.727 - -
48. nr2f6a ENSDARG00000003607 4779 1.699 - - - - 0.827 - - - 0.872 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
49. MAP4K4 ENSDARG00000098670 4665 1.697 - - - - 0.936 0.761 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
50. CABZ01092303.1 CABZ01092303.1 8825 1.696 - - - - 0.873 - 0.823 - -
51. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.694 - - - - 0.949 - 0.745 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
52. CDCA4 ENSDARG00000042319 7918 1.694 - - - - 0.972 0.722 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
53. khdrbs1b ENSDARG00000070475 18157 1.693 - 0.973 - - - - - 0.720 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
54. PPFIBP1_1 PPFIBP1_1 2256 1.692 - 0.985 - - - - 0.707 - -
55. elavl1 11672 1.69 - 0.967 - - - - - 0.723 - ELAV like RNA binding protein 1, transcript variant X3
56. nsfl1c ENSDARG00000087640 2226 1.686 - - - - 0.968 0.718 - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
57. rbm34 ENSDARG00000101877 1573 1.686 - 0.843 - - - - - - 0.843 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
58. ap2b1 ENSDARG00000035152 2912 1.685 - 0.984 - - - 0.701 - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
59. gpm6ab ENSDARG00000004621 5825 1.681 - - - - 0.958 - 0.723 - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
60. ckap5 ENSDARG00000102674 5068 1.681 - - 0.713 - 0.968 - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
61. fam89a ENSDARG00000079979 4375 1.68 - - - - 0.953 0.727 - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
62. hdac4 ENSDARG00000098349 1370 1.673 - - - - - - 0.804 - 0.869 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
63. lmnb2 ENSDARG00000101624 11304 1.662 - 0.897 - - - 0.765 - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
64. actr1 ENSDARG00000011611 3879 1.662 - - - - 0.947 - 0.715 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
65. rbm4.3 ENSDARG00000022129 28571 1.656 - - - - 0.801 0.855 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
66. eps15l1a ENSDARG00000042670 1565 1.652 - - - - - 0.735 - - 0.917 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
67. pbxip1b ENSDARG00000011824 3726 1.648 - 0.941 - - - - - - 0.707 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
68. EIF1B ENSDARG00000029445 5034 1.646 - - - - - - 0.733 - 0.913 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
69. bahcc1 bahcc1 1934 1.645 - - - 0.729 - - - - 0.916
70. srsf6b ENSDARG00000016783 9926 1.645 - - - - - 0.739 - - 0.906 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
71. phc2b_1 ENSDARG00000013224 1316 1.643 - - - - - 0.726 - - 0.917 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
72. mier1a ENSDARG00000041072 1690 1.635 - - - 0.733 - - - - 0.902 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
73. ubqln4 ENSDARG00000052975 6453 1.634 - - - - - 0.842 0.792 - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
74. serpinh1a ENSDARG00000075954 6488 1.631 - - - - 0.896 - 0.735 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
75. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.629 - - - - - 0.773 - - 0.856 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
76. copz1 ENSDARG00000017844 7277 1.627 - 0.920 - - - - 0.707 - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
77. srsf5b ENSDARG00000027734 6996 1.622 - - - - - 0.856 - 0.766 - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
78. cpne1 ENSDARG00000075536 4063 1.619 - 0.915 - - - - 0.704 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
79. kifc1 ENSDARG00000001558 6658 1.617 - - - - - - 0.715 - 0.902 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
80. fscn1a ENSDARG00000059680 3999 1.611 - - - - - 0.810 - - 0.801 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
81. vdac1 ENSDARG00000045132 8051 1.611 - - - - - 0.790 - - 0.821 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
82. plcg1 ENSDARG00000038442 5324 1.609 - - - - - 0.799 - - 0.810 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
83. rbm8a ENSDARG00000016516 8789 1.609 - 0.887 - - - - 0.722 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
84. supt6h ENSDARG00000006524 3221 1.609 - - - - - 0.712 - - 0.897 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
85. sumo3b ENSDARG00000035993 3414 1.604 - - - - - - - 0.708 0.896 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
86. TNPO2 ENSDARG00000042887 2290 1.602 - - - - - 0.712 - - 0.890 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
87. supt16h ENSDARG00000079949 4755 1.6 - - - - - - 0.705 - 0.895 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
88. ammecr1 ENSDARG00000012892 14475 1.6 - 0.781 - - - 0.819 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
89. PARL 2511 1.598 - - - - - - 0.736 - 0.862 presenilin associated rhomboid like
90. rerea ENSDARG00000077353 4162 1.595 - - - - - 0.824 - - 0.771 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
91. mad2l1 ENSDARG00000004713 3398 1.594 - - - - 0.865 0.729 - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
92. csnk1da ENSDARG00000008370 3469 1.587 - - - - - 0.803 - 0.784 - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
93. hgs ENSDARG00000020960 3574 1.584 - - - - - - 0.775 - 0.809 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
94. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.584 - - - - - 0.873 0.711 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
95. rbmx ENSDARG00000014244 3445 1.581 - - - - - 0.835 0.746 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
96. polr2k ENSDARG00000075616 2047 1.579 - - - - - - 0.714 - 0.865 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
97. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.576 - - - - - - 0.747 - 0.829 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
98. wls ENSDARG00000009534 8719 1.574 - - - - 0.817 - 0.757 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
99. ctnnb1 ENSDARG00000014571 12004 1.573 - - - - 0.824 0.749 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
100. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.572 - - 0.774 - - 0.798 - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]

There are 1391 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA