Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tpx2

Gene Name Gene ID Reads Annotation
tpx2 ENSDARG00000078654 8120 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]










Genes with expression patterns similar to tpx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpx2 ENSDARG00000078654 8120 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
2. smarcd1 ENSDARG00000019004 6028 3.056 - 0.780 - - 0.770 0.726 0.780 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
3. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.391 - - - - 0.809 - 0.767 - 0.815 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
4. LIMD2 ENSDARG00000078092 3414 2.37 - 0.846 - - - 0.789 - 0.735 - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
5. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.332 - - - - 0.771 - 0.754 - 0.807 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
6. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 2.298 - - 0.789 - - 0.743 0.766 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
7. ZBTB16 ZBTB16 3385 2.294 - 0.734 0.794 - - 0.766 - - -
8. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 2.267 - - 0.788 - 0.778 - 0.701 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
9. ywhae2 ENSDARG00000017014 5105 2.219 - 0.783 0.736 - - - 0.700 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
10. ubqln4 ENSDARG00000052975 6453 2.163 - - - - - 0.745 0.714 0.704 - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
11. pcnp ENSDARG00000037713 2754 2.16 - 0.722 0.721 - - - - - 0.717 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
12. lypla2 ENSDARG00000053656 8971 2.158 - 0.712 - - 0.714 - 0.732 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
13. lsm6 ENSDARG00000036995 4377 2.145 - - 0.703 - - - 0.710 - 0.732 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
14. ncor2 ENSDARG00000000966 3352 1.78 - - - 0.995 - 0.785 - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
15. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.771 - 0.775 - 0.996 - - - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
16. si:dkey-65b12.6 ENSDARG00000076830 2489 1.741 - - - 0.994 - 0.747 - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
17. ranbp1 ENSDARG00000014817 3371 1.726 - - - 0.996 - 0.730 - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
18. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.716 - - - 0.997 - - 0.719 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
19. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.712 - - 0.719 0.993 - - - - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
20. gpd1b ENSDARG00000043180 6002 1.708 - - - 0.992 - 0.716 - - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
21. luc7l3 ENSDARG00000014366 4416 1.698 - - - 0.995 - - - 0.703 - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
22. tpd52l2b ENSDARG00000013655 9460 1.693 - - - 0.993 - 0.700 - - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
23. fam50a ENSDARG00000024895 3020 1.661 - - 0.798 - - - 0.863 - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
24. znf865 ENSDARG00000036698 15532 1.643 - - - - - - 0.819 - 0.824 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
25. cul4b ENSDARG00000060510 6053 1.636 - - 0.840 - - 0.796 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
26. nova1 ENSDARG00000020178 4129 1.635 - - 0.885 - - - - - 0.750 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
27. epc2 ENSDARG00000007485 1200 1.629 - 0.876 - - - - 0.753 - - enhancer of polycomb homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-802]
28. FRMD4A ENSDARG00000042249 2883 1.62 - 0.822 - - - 0.798 - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
29. pdia3 ENSDARG00000102640 7239 1.619 - 0.826 - - - - 0.793 - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
30. serinc1 ENSDARG00000009106 10571 1.618 - 0.816 - - - - 0.802 - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
31. COL4A3BP COL4A3BP 3288 1.614 - 0.785 0.829 - - - - - -
32. hn1b hn1b 7325 1.61 - - - - - - 0.873 - 0.737
33. xylt1 ENSDARG00000061248 2357 1.608 - - 0.810 - - - 0.798 - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
34. myef2 ENSDARG00000059398 6050 1.607 - - - - 0.828 - 0.779 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
35. adam10a ENSDARG00000053468 9308 1.605 - 0.855 0.750 - - - - - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
36. meaf6 ENSDARG00000101216 6865 1.6 - - - - 0.753 - 0.847 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
37. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.597 - - 0.800 - - - 0.797 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
38. eif3ja ENSDARG00000012603 6324 1.595 - - 0.789 - - - - - 0.806 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
39. eif4g2b ENSDARG00000057167 22982 1.595 - - 0.861 - 0.734 - - - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
40. foxk2 ENSDARG00000030583 2982 1.588 - - 0.838 - 0.750 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
41. mad2l1 ENSDARG00000004713 3398 1.585 - - 0.779 - - - 0.806 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
42. appbp2 ENSDARG00000007566 1961 1.576 - 0.783 0.793 - - - - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
43. ss18 ENSDARG00000002970 2618 1.576 - - 0.818 - - - - - 0.758 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
44. smg5 ENSDARG00000041481 1286 1.565 - - 0.817 - - - 0.748 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
45. pank1b ENSDARG00000010098 3202 1.563 - - 0.811 - - - - - 0.752 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
46. mcm7 ENSDARG00000101180 12417 1.562 - - 0.728 - - - 0.834 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
47. gspt1l ENSDARG00000098627 8381 1.561 - 0.780 0.781 - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
48. top2b ENSDARG00000034195 3715 1.56 - - - - - - 0.778 - 0.782 DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
49. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.557 - - - - 0.731 - - - 0.826 heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
50. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.557 - - - - - - 0.719 - 0.838 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
51. u2af2b ENSDARG00000011740 6946 1.555 - - - - 0.714 - 0.841 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
52. ldb1a ENSDARG00000010137 3035 1.553 - 0.736 0.817 - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
53. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.552 - 0.775 - - - - - - 0.777 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
54. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.551 - - 0.819 - - - 0.732 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
55. NAIF1_1 NAIF1_1 1336 1.55 - 0.729 0.821 - - - - - -
56. uba1 ENSDARG00000037559 11579 1.549 - 0.722 - - 0.827 - - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
57. ankrd50l ENSDARG00000007077 1115 1.548 - 0.752 - - - 0.796 - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
58. lbr ENSDARG00000014013 4835 1.546 - - 0.781 - 0.765 - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
59. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.546 - 0.733 - - - - - - 0.813 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
60. wasf2 ENSDARG00000024209 5338 1.545 - 0.830 - - - 0.715 - - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
61. CABZ01072954.1 CABZ01072954.1 2330 1.542 - - 0.802 - - - 0.740 - -
62. lrp12 ENSDARG00000098845 999 1.54 - - 0.815 - - - - - 0.725 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
63. map3k7 ENSDARG00000020469 2845 1.539 - 0.796 - - - - - - 0.743 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
64. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.538 - 0.776 - - - 0.762 - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
65. gipc1 ENSDARG00000104483 2913 1.537 - - - - 0.778 - - - 0.759 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
66. inip ENSDARG00000028523 1925 1.536 - - 0.818 - - - 0.718 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
67. tmem134 ENSDARG00000024828 3241 1.536 - 0.814 - - 0.722 - - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
68. CABZ01092303.1 CABZ01092303.1 8825 1.532 - - 0.806 - - 0.726 - - -
69. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.532 - - 0.818 - - - 0.714 - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
70. degs1 ENSDARG00000007347 2481 1.531 - 0.774 - - - 0.757 - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
71. ctbp2 ctbp2 3255 1.53 - - - - - - 0.791 - 0.739
72. atad5a ENSDARG00000070568 1840 1.53 - - 0.813 - 0.717 - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
73. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.528 - - 0.805 - - - 0.723 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
74. polr2a ENSDARG00000099966 5706 1.527 - 0.767 - - 0.760 - - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
75. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.526 - - 0.806 - - - 0.720 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
76. midn ENSDARG00000018524 7559 1.522 - - 0.805 - - - 0.717 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
77. psmb7 ENSDARG00000037962 11542 1.521 - 0.761 - - - - 0.760 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
78. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.515 - 0.753 - - - 0.762 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
79. hspa5 ENSDARG00000103846 4661 1.513 - 0.786 - - - - 0.727 - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
80. prpf8 ENSDARG00000026180 7026 1.51 - - - - 0.776 0.734 - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
81. kifc1 ENSDARG00000001558 6658 1.51 - - 0.743 - - - 0.767 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
82. tuba1c ENSDARG00000055216 8384 1.508 - - 0.774 - 0.734 - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
83. clic4 ENSDARG00000022995 6064 1.506 - 0.729 - - - - - - 0.777 chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
84. mbpb ENSDARG00000089413 3334 1.503 - 0.747 - - - 0.756 - - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
85. TNRC6A ENSDARG00000079688 14433 1.502 - - - - - 0.780 0.722 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
86. rab1ba ENSDARG00000058044 5080 1.501 - 0.790 0.711 - - - - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
87. psma8 ENSDARG00000010965 8321 1.5 - 0.770 - - - - - - 0.730 proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
88. slbp ENSDARG00000100558 3405 1.499 - 0.768 - - - 0.731 - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
89. hnrnpr ENSDARG00000014569 3423 1.496 - - - - 0.771 - 0.725 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
90. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.496 - - 0.774 - - - 0.722 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
91. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.496 - - 0.780 - - 0.716 - - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
92. GABARAP GABARAP 8341 1.495 - - - - - - 0.737 - 0.758
93. hmgb3a ENSDARG00000056725 15668 1.493 - - - - 0.738 - 0.755 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
94. npm1b ENSDARG00000037675 5448 1.493 - - 0.719 - - - 0.774 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
95. TAF15 ENSDARG00000070019 5102 1.493 - 0.770 - - 0.723 - - - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
96. map2k6 ENSDARG00000099184 8741 1.491 - - - - 0.719 - - - 0.772 mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
97. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.489 - - - - - - 0.733 - 0.756 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
98. tm2d3 ENSDARG00000076618 2310 1.489 - - 0.771 - - - 0.718 - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
99. rapgef2 ENSDARG00000005482 2586 1.489 - - - - - - 0.727 - 0.762 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
100. irs1 ENSDARG00000054087 1809 1.488 - 0.772 - - - 0.716 - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]

There are 1284 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA