Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tpma

Gene Name Gene ID Reads Annotation
tpma ENSDARG00000033683 752432 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]










Genes with expression patterns similar to tpma

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpma ENSDARG00000033683 752432 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
2. ckmb ENSDARG00000040565 505935 7.1 0.943 0.782 0.945 0.913 0.934 0.861 0.888 0.834 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
3. atp2a1 ENSDARG00000020574 291561 6.994 0.938 - 0.961 0.877 0.933 0.780 0.823 0.919 0.763 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
4. mylz3 ENSDARG00000017441 303597 6.811 0.926 - 0.919 0.845 0.943 0.819 0.859 0.729 0.771 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
5. ckma ENSDARG00000035327, ENSDARG00000114671 418792 6.794 0.948 - 0.911 0.896 0.920 0.736 0.799 0.796 0.788 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. tnnt3a ENSDARG00000030270 112506 6.702 0.931 - 0.917 0.861 0.908 0.713 0.809 0.762 0.801 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
7. mybpc2b ENSDARG00000021265 9618 6.607 0.911 - 0.860 0.885 0.772 0.752 0.798 0.910 0.719 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
8. acta1b ENSDARG00000055618 195597 6.154 0.938 - 0.941 0.742 0.801 0.878 0.911 0.943 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
9. si:ch211-226o13.2 84923 6.118 0.867 - 0.942 0.889 0.894 0.880 - 0.856 0.790 si:ch211-226o13.2
10. aldoab ENSDARG00000034470 88942 6.087 0.923 - 0.793 0.912 0.887 0.831 0.831 0.910 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
11. tnni2a.4 ENSDARG00000029069 122344 6.012 0.928 - 0.912 0.819 0.921 0.718 - 0.909 0.805 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
12. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 5.853 0.939 - 0.814 - 0.777 0.860 0.807 0.896 0.760 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
13. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 5.84 0.906 - 0.916 0.834 0.732 0.748 0.834 0.870 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
14. ttnb ttnb 73721 5.79 0.831 - 0.883 0.890 0.881 0.810 0.709 0.786 -
15. SYNPO2L SYNPO2L 6697 5.756 0.911 - 0.869 0.837 0.824 0.720 - 0.842 0.753
16. CR847973.1 ENSDARG00000115516 8754 5.631 0.830 - 0.902 0.886 0.725 - 0.763 0.795 0.730
17. tnnt2d ENSDARG00000002988 7590 5.607 0.816 - 0.812 0.852 0.764 - 0.774 0.852 0.737 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
18. pkmb ENSDARG00000099860 25094 5.6 0.843 - - 0.715 0.781 0.874 0.800 0.835 0.752 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
19. PTPLA PTPLA 4044 5.548 0.846 - 0.819 0.797 - 0.715 0.835 0.807 0.729
20. pvalb4 ENSDARG00000024433 35736 5.27 0.888 - 0.917 0.950 0.883 - 0.785 0.847 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
21. tmem38a ENSDARG00000024047 41883 5.269 0.888 - 0.938 0.834 0.834 0.882 - 0.893 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
22. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 5.245 0.980 0.737 0.938 - 0.921 0.861 - 0.808 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
23. myhz1.3 ENSDARG00000067997 155509 5.196 0.970 - 0.932 0.900 0.921 0.723 - 0.750 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
24. rtn2a ENSDARG00000016088 12184 5.167 0.905 - 0.833 0.882 0.812 - 0.852 0.883 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
25. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 5.156 0.846 - 0.948 - 0.876 - 0.841 0.893 0.752 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
26. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 5.149 0.933 0.844 - 0.832 0.811 0.830 - 0.899 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
27. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 5.137 0.878 - 0.949 0.910 0.915 0.754 - 0.731 - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
28. tnnt3b ENSDARG00000068457 101827 5.136 0.836 - 0.903 0.886 0.781 0.813 - 0.917 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
29. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 5.098 0.930 - 0.801 0.850 - 0.910 - 0.810 0.797 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
30. myoz1b ENSDARG00000071445 13381 5.042 0.899 - 0.878 0.855 0.800 - - 0.825 0.785 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
31. ak1 ENSDARG00000001950 26964 5.04 0.876 - - 0.913 0.908 0.813 0.739 0.791 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
32. jph2 ENSDARG00000028625 6706 5.004 0.852 - - 0.879 0.814 - 0.831 0.865 0.763 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
33. myl1 ENSDARG00000014196 98943 4.993 0.855 - 0.939 0.734 0.928 0.798 - 0.739 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
34. srl ENSDARG00000104587 11126 4.99 0.864 - 0.857 0.870 0.775 - 0.830 0.794 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
35. hhatla ENSDARG00000039051 6598 4.972 0.899 - 0.861 0.848 0.758 - 0.831 - 0.775 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
36. neb ENSDARG00000032630, ENSDARG00000109273 19493 4.931 0.875 - 0.867 0.921 0.810 - - 0.714 0.744 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
37. tmem182 tmem182 12589 4.888 0.739 - 0.830 0.850 - 0.741 0.846 0.882 -
38. klhl31 ENSDARG00000039066 13656 4.886 0.837 - 0.887 0.823 0.790 - - 0.828 0.721 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
39. CR354540.2 ENSDARG00000117517 18452 4.847 0.875 - 0.864 0.738 0.816 - 0.828 - 0.726
40. sar1ab ENSDARG00000033320 3984 4.839 0.822 - 0.839 0.833 0.810 - 0.803 0.732 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
41. tgm2a ENSDARG00000070157 4516 4.837 0.907 - 0.883 0.700 0.790 0.719 0.838 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
42. ank1 ank1 5209 4.832 0.885 - 0.864 0.757 0.708 - - 0.861 0.757
43. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.815 0.835 - 0.806 0.779 - - 0.804 0.838 0.753 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
44. EHBP1L1 EHBP1L1 2500 4.778 0.886 - 0.811 0.778 0.757 - 0.838 0.708 -
45. BX294434.1 ENSDARG00000061272 6493 4.745 0.869 - 0.790 0.739 - - 0.832 0.765 0.750 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
46. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.7 0.848 - 0.789 0.752 - - 0.806 0.799 0.706 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
47. casq2 ENSDARG00000008982 21802 4.549 0.936 - 0.917 0.904 0.897 - - 0.895 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
48. mylpfb ENSDARG00000002589 70167 4.424 - - 0.919 0.882 0.875 0.854 - 0.894 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
49. desma ENSDARG00000058656 30292 4.335 0.898 - 0.930 0.895 0.877 - - 0.735 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
50. actc1b ENSDARG00000099197 324665 4.328 0.902 - 0.952 0.748 0.938 - - 0.788 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
51. pgam2 ENSDARG00000057571 23387 4.328 0.908 - 0.764 0.923 0.843 - - 0.890 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
52. ttna ttna 101197 4.293 0.939 - 0.924 - 0.879 - - 0.825 0.726
53. murcb murcb 13655 4.248 0.920 - 0.760 0.935 - - 0.820 0.813 -
54. SPEG SPEG 4017 4.165 0.820 - 0.861 0.868 0.790 - 0.826 - -
55. eef2l2 ENSDARG00000035256 6815 4.163 0.859 - 0.872 0.894 0.763 - - 0.775 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
56. gapdh ENSDARG00000043457 68684 4.159 0.718 - 0.883 0.876 0.780 - - 0.902 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
57. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 4.143 0.853 - 0.873 0.801 - - 0.808 0.808 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
58. si:ch211-156j16.1 ENSDARG00000092035 7441 4.121 0.916 - 0.792 0.808 - - 0.832 0.773 - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
59. si:ch211-114n24.7 si:ch211-114n24.7 2544 4.119 0.843 - 0.880 0.839 0.777 - 0.780 - -
60. vcl vcl 6667 4.079 0.877 - 0.914 0.769 0.815 - - 0.704 -
61. myom1a ENSDARG00000061249 10230 4.079 - - 0.896 - - 0.740 0.828 0.900 0.715 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
62. zgc:92518 ENSDARG00000016343 3837 4.057 0.909 - 0.807 0.754 0.754 - 0.833 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
63. nexn ENSDARG00000057317 10972 4.04 0.912 - 0.828 0.761 - 0.726 0.813 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
64. NRAP ENSDARG00000009341 3565 3.996 0.869 - 0.787 0.811 - 0.715 0.814 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
65. prx ENSDARG00000017246 6183 3.975 0.850 - 0.793 0.782 0.714 - 0.836 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
66. ryr1b ENSDARG00000023797 5693 3.973 - - 0.811 - 0.783 - 0.834 0.804 0.741 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
67. pmp22b ENSDARG00000060457 20406 3.956 0.718 - - - 0.832 0.707 0.825 0.874 - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
68. cap2 ENSDARG00000104478 3266 3.948 0.860 - - 0.763 - - 0.810 0.806 0.709 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
69. casq1b ENSDARG00000018105 2643 3.947 0.808 - 0.766 0.834 0.720 - 0.819 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
70. ryr3 ENSDARG00000071331 6795 3.921 0.830 - 0.811 - 0.717 - 0.816 - 0.747 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
71. nmrk2 ENSDARG00000067848 10293 3.912 0.725 - 0.738 - 0.816 - 0.821 0.812 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
72. mdh1b ENSDARG00000018008 3196 3.904 0.841 - 0.789 0.734 - - 0.827 - 0.713 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
73. MYOM1 MYOM1 3870 3.86 0.801 - 0.818 - - - 0.802 0.735 0.704
74. tmem161a ENSDARG00000012790 16094 3.832 0.926 - 0.735 0.753 0.703 - - - 0.715 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
75. stac3 ENSDARG00000098883 1765 3.78 0.845 - 0.749 0.702 - 0.724 0.760 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
76. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.769 0.814 - - 0.753 0.735 - - 0.717 0.750 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
77. si:ch211-255p10.3 ENSDARG00000096616 8336 3.748 - - 0.713 - - 0.706 0.746 0.821 0.762 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
78. trim63 trim63 2437 3.739 0.789 - 0.704 - 0.756 0.702 0.788 - -
79. znf648 ENSDARG00000104823 1918 3.705 0.798 - 0.728 0.753 - - 0.720 - 0.706 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
80. pygma ENSDARG00000055518 15972 3.549 0.928 - - - 0.881 - 0.797 0.943 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
81. ldb3b ENSDARG00000099974 33615 3.541 0.899 - 0.931 - - 0.872 - 0.839 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
82. actn3b ENSDARG00000001431 15747 3.537 0.925 - 0.910 0.904 0.798 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
83. trdn ENSDARG00000041779 4283 3.317 0.869 - 0.848 - 0.782 - 0.818 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
84. tmod4 ENSDARG00000020890 17436 3.316 - - 0.896 0.889 0.781 - - - 0.750 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
85. COL22A1 COL22A1 4473 3.287 0.820 - 0.865 - 0.767 - 0.835 - -
86. SYNPO2 SYNPO2 7382 3.281 - - 0.916 0.820 0.722 - - 0.823 -
87. klhl41b ENSDARG00000006757 10762 3.264 0.907 - 0.749 - - - 0.841 0.767 - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
88. apobec2a ENSDARG00000018881 4790 3.252 0.825 - 0.753 0.822 - - - 0.852 - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
89. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.241 0.908 - 0.828 0.722 - - 0.783 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
90. znf106a ENSDARG00000016651 6049 3.236 0.822 - - 0.780 0.827 - 0.807 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
91. tnni1al 8272 3.221 0.797 - 0.842 0.757 - - - 0.825 - troponin I, skeletal, slow like, transcript variant X1
92. cfl2 ENSDARG00000014106 8051 3.22 0.823 - 0.870 0.820 0.707 - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
93. murca murca 6614 3.218 0.901 - 0.851 0.701 0.765 - - - -
94. cav3 ENSDARG00000024141 14906 3.196 0.719 - - 0.837 0.821 - 0.819 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
95. smyd2b ENSDARG00000005629 8181 3.194 0.870 - 0.755 - 0.839 0.730 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
96. BX324201.1 BX324201.1 3302 3.184 0.880 - 0.720 - - - 0.821 0.763 -
97. hhatlb ENSDARG00000005139 6674 3.174 0.828 - 0.801 - 0.749 - - 0.796 - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
98. sgcd ENSDARG00000098573 4980 3.166 0.844 - 0.775 - 0.762 - 0.785 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
99. usp28 ENSDARG00000008880 1850 3.16 0.872 - 0.749 - - - 0.802 0.737 - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
100. adss ENSDARG00000002071 5497 3.138 0.809 - 0.785 - 0.735 - 0.809 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]

There are 537 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA