Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tpm4b

Gene Name Gene ID Reads Annotation
tpm4b ENSDARG00000019128 450 tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]










Genes with expression patterns similar to tpm4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpm4b ENSDARG00000019128 450 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]
2. si:dkeyp-53d3.6 204 2.232 0.812 - - 0.705 - 0.715 - - - si:dkeyp-53d3.6, transcript variant X1
3. si:dkey-56e3.3 ENSDARG00000075194 491 1.631 0.841 0.790 - - - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
4. fstl1a ENSDARG00000015559 1687 1.603 - 0.826 - 0.777 - - - - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
5. tcp11l1 ENSDARG00000031890 257 1.542 0.831 - - 0.711 - - - - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
6. tgfbrap1 ENSDARG00000061508 504 1.539 - - - - - 0.778 0.761 - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
7. unk ENSDARG00000000935 353 1.525 0.728 0.797 - - - - - - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
8. ntf3 ENSDARG00000059043 355 1.513 0.796 - - - - 0.717 - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
9. cdkn1a ENSDARG00000076554 591 1.478 - 0.771 - - - - 0.707 - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
10. PIGB ENSDARG00000105011 277 1.47 - - - 0.709 - - 0.761 - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
11. dnajb9a ENSDARG00000052072 578 1.463 0.756 - - 0.707 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
12. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.457 0.728 - - - - - 0.729 - -
13. srcap ENSDARG00000005236 1740 1.455 0.736 - - - - 0.719 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
14. BRSK2_1 BRSK2_1 99 1.446 - 0.740 - - - 0.706 - - -
15. GUSB ENSDARG00000063126 2712 1.435 0.718 - - - - - 0.717 - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
16. DVL3 1098 0.953 - 0.953 - - - - - - - dishevelled segment polarity protein 3
17. cyp17a1 ENSDARG00000033566 284 0.936 - 0.936 - - - - - - - cytochrome P450, family 17, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040213-2]
18. CABZ01084007.1 CABZ01084007.1 199 0.92 - 0.920 - - - - - - -
19. trap1_1 ENSDARG00000024317, ENSDARG00000114173 480 0.911 - 0.911 - - - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
20. c1qtnf3 c1qtnf3 387 0.901 - 0.901 - - - - - - -
21. edem2 ENSDARG00000028448 236 0.9 - 0.900 - - - - - - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
22. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 0.897 - 0.897 - - - - - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
23. mir10b-2 116 0.892 - 0.892 - - - - - - - microRNA 10b-2
24. CABZ01049362.1 ENSDARG00000099508 570 0.89 - 0.890 - - - - - - -
25. fam43a ENSDARG00000043009 792 0.89 - - - - - 0.890 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
26. MPPED1 ENSDARG00000088181 117 0.884 - 0.884 - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
27. ssb ENSDARG00000029252 3394 0.882 - - - - - - 0.882 - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
28. zgc:110821 ENSDARG00000077085 210 0.882 - 0.882 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
29. atp8b1 ENSDARG00000060980 181 0.882 - 0.882 - - - - - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
30. gtf2a2 ENSDARG00000053685, ENSDARG00000109493, ENSDARG00000113094 515 0.881 - - - - - - 0.881 - - general transcription factor IIA, 2 [Source:ZFIN;Acc:ZDB-GENE-050522-513]
31. sostdc1a ENSDARG00000068892 127 0.88 - 0.880 - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
32. ZBTB11 ENSDARG00000017886 817 0.879 - 0.879 - - - - - - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
33. rab6ba ENSDARG00000034522 495 0.879 - 0.879 - - - - - - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
34. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.879 - 0.879 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
35. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 0.877 0.877 - - - - - - - - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
36. manf ENSDARG00000063177, ENSDARG00000114083 570 0.877 - 0.877 - - - - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
37. PARM1 ENSDARG00000114063 58 0.877 - 0.877 - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
38. pkmyt1 ENSDARG00000074730 213 0.877 - 0.877 - - - - - - - protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
39. soat2 ENSDARG00000059824 62 0.876 - 0.876 - - - - - - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
40. slc35b1 ENSDARG00000038213 465 0.875 - 0.875 - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
41. nceh1a ENSDARG00000020427 35 0.875 - 0.875 - - - - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
42. APOBEC2 APOBEC2 9 0.875 - 0.875 - - - - - - -
43. ndor1 ENSDARG00000007429 113 0.874 - 0.874 - - - - - - - NADPH dependent diflavin oxidoreductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1555]
44. idua ENSDARG00000062904 105 0.874 - 0.874 - - - - - - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
45. DNAJB14 ENSDARG00000069996 144 0.874 - 0.874 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
46. CR847998.1 ENSDARG00000104784 518 0.874 - 0.874 - - - - - - -
47. slc7a2 ENSDARG00000037097, ENSDARG00000109424 122 0.872 - 0.872 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-5]
48. fam102bb ENSDARG00000002333 1483 0.87 - 0.870 - - - - - - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
49. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.869 - 0.869 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
50. top3a ENSDARG00000052827 148 0.866 - 0.866 - - - - - - - DNA topoisomerase III alpha [Source:ZFIN;Acc:ZDB-GENE-071212-2]
51. sorbs2a ENSDARG00000003046 242 0.866 - 0.866 - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
52. SHF SHF 92 0.866 - 0.866 - - - - - - -
53. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.866 - 0.866 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
54. zgc:112038 ENSDARG00000046140 73 0.866 - 0.866 - - - - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
55. slc6a6a ENSDARG00000012534 183 0.866 - 0.866 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
56. b3gnt5b ENSDARG00000004396 1152 0.866 0.866 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
57. zgc:173480 171 0.865 0.865 - - - - - - - - zgc:173480
58. NPBWR2 NPBWR2 132 0.864 - 0.864 - - - - - - -
59. zmynd19 ENSDARG00000100773 224 0.864 - 0.864 - - - - - - - zinc finger, MYND-type containing 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4460]
60. MAGI3 MAGI3 114 0.863 - 0.863 - - - - - - -
61. adamts9 ENSDARG00000077778 419 0.862 - 0.862 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
62. gabrg2 ENSDARG00000053665 434 0.862 - 0.862 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
63. zgc:158856 zgc:158856 23 0.862 - 0.862 - - - - - - -
64. snap25b ENSDARG00000058117 469 0.861 - 0.861 - - - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
65. BX088708.1 BX088708.1 6503 0.861 0.861 - - - - - - - -
66. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 0.861 0.861 - - - - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
67. si:ch211-197n1.2 58 0.859 - 0.859 - - - - - - - si:ch211-197n1.2, transcript variant X1
68. PDXK PDXK 224 0.858 - 0.858 - - - - - - -
69. TGIF2 TGIF2 22 0.858 - 0.858 - - - - - - -
70. B3GALT1 B3GALT1 159 0.858 - 0.858 - - - - - - -
71. agtr1b ENSDARG00000045443 232 0.858 - 0.858 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
72. CR388013.3 CR388013.3 45 0.857 - 0.857 - - - - - - -
73. CABZ01112647.1 CABZ01112647.1 147 0.857 - 0.857 - - - - - - -
74. opn1mw1 ENSDARG00000097008 9 0.857 - 0.857 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
75. FRRS1 FRRS1 80 0.857 - 0.857 - - - - - - -
76. si:dkey-30j10.5 ENSDARG00000093186 13 0.857 - 0.857 - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
77. HTRA4 ENSDARG00000005943 77 0.857 - 0.857 - - - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
78. si:dkey-149i8.3 si:dkey-149i8.3 9 0.857 - 0.857 - - - - - - -
79. BX569789.1 ENSDARG00000099678 4 0.857 - 0.857 - - - - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571582]
80. MYO1C MYO1C 140 0.857 - 0.857 - - - - - - -
81. VASH1 ENSDARG00000092716 33 0.857 - 0.857 - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
82. epha8 22 0.857 - 0.857 - - - - - - - eph receptor A8
83. znf142 ENSDARG00000061373 47 0.857 - 0.857 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
84. ndufs8b ENSDARG00000057055 10 0.857 - 0.857 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
85. SSTR2 SSTR2 12 0.857 - 0.857 - - - - - - -
86. SOX8 SOX8 22 0.857 - 0.857 - - - - - - -
87. FKBP15 FKBP15 15 0.857 - 0.857 - - - - - - -
88. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.857 - 0.857 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
89. CR847511.1 CR847511.1 80 0.857 - 0.857 - - - - - - -
90. si:dkey-1b17.5 ENSDARG00000101425 130 0.857 - 0.857 - - - - - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
91. olfml3a ENSDARG00000061852 139 0.857 - 0.857 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
92. si:ch211-126g16.8 3 0.857 - 0.857 - - - - - - - si:ch211-126g16.8, transcript variant X1
93. RBM44 RBM44 25 0.857 - 0.857 - - - - - - -
94. cers4a ENSDARG00000031387 19 0.857 - 0.857 - - - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
95. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.857 - 0.857 - - - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
96. lamb1a_1 ENSDARG00000101209 13 0.857 - 0.857 - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
97. si:ch211-251f6.7 ENSDARG00000091558 25 0.857 - 0.857 - - - - - - - si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]
98. pyya ENSDARG00000053449 134 0.857 - 0.857 - - - - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
99. MCC ENSDARG00000105237 4 0.857 - 0.857 - - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
100. TARBP1 TARBP1 17 0.857 - 0.857 - - - - - - -

There are 703 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA