Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tpi1b

Gene Name Gene ID Reads Annotation
tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]










Genes with expression patterns similar to tpi1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
2. gapdh ENSDARG00000043457 68684 3.404 - - 0.860 0.862 0.904 - - 0.778 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
3. si:ch211-226o13.2 84923 3.303 - - 0.862 0.827 0.775 - - 0.839 - si:ch211-226o13.2
4. atp2a1 ENSDARG00000020574 291561 3.262 - - 0.867 0.809 0.812 - - 0.774 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
5. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.251 - - 0.873 0.876 0.706 - 0.796 - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
6. mylpfb ENSDARG00000002589 70167 3.238 - - 0.848 0.790 0.794 - - 0.806 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
7. tnnt3b ENSDARG00000068457 101827 3.227 - - 0.870 0.807 0.713 - - 0.837 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
8. mylz3 ENSDARG00000017441 303597 3.199 - - 0.862 0.729 0.770 - - 0.838 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. ckmb ENSDARG00000040565 505935 3.191 - - 0.855 0.749 0.748 - - 0.839 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.14 - - 0.819 0.715 0.744 - - 0.862 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. myoz1b ENSDARG00000071445 13381 3.139 - - 0.826 0.755 0.711 - - 0.847 - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
12. CR847973.1 ENSDARG00000115516 8754 3.129 - - 0.795 0.815 0.774 - - 0.745 -
13. tpma ENSDARG00000033683 752432 3.123 - - 0.861 0.795 0.727 - - 0.740 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
14. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.122 - - 0.744 0.815 0.763 - - 0.800 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.527 - - 0.839 - 0.797 - - 0.891 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. myl1 ENSDARG00000014196 98943 2.503 - - 0.875 - 0.777 - - 0.851 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
17. tnnt3a ENSDARG00000030270 112506 2.479 - - 0.855 - 0.784 - - 0.840 - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
18. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 2.464 - - 0.821 - 0.816 - - 0.827 - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
19. suclg1 ENSDARG00000052712 17570 2.453 - - - - 0.768 - 0.959 0.726 - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
20. tnni2a.4 ENSDARG00000029069 122344 2.446 - - 0.798 - 0.823 - - 0.825 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
21. ttnb ttnb 73721 2.438 - - 0.859 0.836 - - - 0.743 -
22. casq2 ENSDARG00000008982 21802 2.433 - - 0.834 0.809 0.790 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
23. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 2.396 - - 0.786 - 0.870 - - 0.740 - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
24. tmod4 ENSDARG00000020890 17436 2.39 - - 0.850 0.785 0.755 - - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
25. atp1b1b ENSDARG00000076833 10324 2.387 - - 0.794 - 0.750 - - - 0.843 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
26. CR354540.2 ENSDARG00000117517 18452 2.355 - - 0.817 0.796 - - - 0.742 -
27. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.315 - - 0.785 0.735 - - - 0.795 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
28. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.287 - - 0.720 0.748 - - - 0.819 - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
29. actc1b ENSDARG00000099197 324665 2.287 - - 0.785 0.736 0.766 - - - - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
30. ank1 ank1 5209 2.286 - - 0.762 0.760 - - - 0.764 -
31. myhz1.3 ENSDARG00000067997 155509 2.276 - - 0.796 0.725 0.755 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
32. pgam2 ENSDARG00000057571 23387 2.269 - - - 0.818 0.736 - - 0.715 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
33. SYNPO2L SYNPO2L 6697 2.261 - - 0.817 0.732 0.712 - - - -
34. desma ENSDARG00000058656 30292 2.261 - - 0.805 0.753 0.703 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
35. EHBP1L1 EHBP1L1 2500 2.245 - - 0.776 0.749 0.720 - - - -
36. pvalb4 ENSDARG00000024433 35736 2.24 - - 0.721 0.812 0.707 - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
37. mat1a ENSDARG00000039605, ENSDARG00000115975 15561 2.227 - - 0.732 0.788 0.707 - - - - methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
38. rps24 ENSDARG00000039347 70399 1.81 - - - - - 0.848 0.962 - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
39. ndufa7 ENSDARG00000036684 6051 1.766 - - - - - - 0.943 - 0.823 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
40. rbm39a ENSDARG00000011613 4520 1.749 - - - - - - 0.938 - 0.811 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
41. ldha ENSDARG00000101251 10868 1.713 - - - - 0.740 - 0.973 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
42. nt5c3a ENSDARG00000058597 14299 1.704 - - 0.834 - 0.870 - - - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
43. cx43.4 ENSDARG00000007099 16369 1.684 - - - - - - 0.950 - 0.734 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
44. rab5aa ENSDARG00000018602 8947 1.673 - 0.732 - - - - 0.941 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
45. tmem38a ENSDARG00000024047 41883 1.645 - - 0.825 0.820 - - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
46. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.642 - - 0.819 0.823 - - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
47. acta1b ENSDARG00000055618 195597 1.621 - - 0.835 - - - - 0.786 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
48. actn3b ENSDARG00000001431 15747 1.621 - - 0.802 0.819 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
49. si:ch211-255p10.3 ENSDARG00000096616 8336 1.617 - - 0.790 - - - - 0.827 - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
50. ldb3b ENSDARG00000099974 33615 1.611 - - 0.804 - - - 0.807 - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
51. rbp4 ENSDARG00000101199 59390 1.608 - - 0.765 - 0.843 - - - - retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
52. tnnt2d ENSDARG00000002988 7590 1.604 - - 0.746 0.858 - - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
53. pkmb ENSDARG00000099860 25094 1.591 - - - - 0.766 - - 0.825 - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
54. hhatla ENSDARG00000039051 6598 1.586 - - 0.824 0.762 - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
55. sar1ab ENSDARG00000033320 3984 1.585 - - 0.790 0.795 - - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
56. srl ENSDARG00000104587 11126 1.584 - - 0.772 0.812 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
57. prps1a ENSDARG00000015524 23738 1.584 - - - - 0.815 - - - 0.769 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
58. stat5.1 stat5.1 3337 1.577 - - 0.743 - - - - - 0.834
59. tgm2a ENSDARG00000070157 4516 1.573 - - 0.851 - 0.722 - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
60. prx ENSDARG00000017246 6183 1.57 - - 0.788 0.782 - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
61. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.569 - - 0.818 - - - - 0.751 - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
62. eef2l2 ENSDARG00000035256 6815 1.569 - - 0.816 0.753 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
63. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.564 - - 0.790 0.774 - - - - -
64. ak1 ENSDARG00000001950 26964 1.556 - - - 0.816 - - - 0.740 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
65. ryr1b ENSDARG00000023797 5693 1.55 - - 0.792 - - - - 0.758 - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
66. myom1a ENSDARG00000061249 10230 1.54 - - 0.766 - - - - 0.774 - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
67. apoea ENSDARG00000102004 13212 1.536 - - - - 0.798 - 0.738 - - apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
68. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 1.521 - - - - 0.754 - 0.767 - - solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
69. pbxip1a ENSDARG00000071015 4960 1.518 - - 0.753 0.765 - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
70. mybpc2b ENSDARG00000021265 9618 1.516 - - 0.798 0.718 - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
71. rtn2a ENSDARG00000016088 12184 1.514 - - 0.792 - - - - 0.722 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
72. rpl22l1 ENSDARG00000010244 36262 1.514 - - - - - 0.754 - - 0.760 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
73. gamt ENSDARG00000070844, ENSDARG00000109945 49216 1.511 - - 0.730 - 0.781 - - - - guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
74. jph2 ENSDARG00000028625 6706 1.51 - - - 0.793 - - - 0.717 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
75. SPEG SPEG 4017 1.51 - - 0.769 0.741 - - - - -
76. npc2 ENSDARG00000090912 21929 1.503 - - - - 0.744 - 0.759 - - Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
77. sat1a.1 ENSDARG00000035652 2941 1.502 - - 0.767 - 0.735 - - - - spermidine/spermine N1-acetyltransferase 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-41]
78. glula ENSDARG00000099776 14156 1.496 - - - 0.705 0.791 - - - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
79. gstp1 ENSDARG00000104068 12698 1.496 0.704 - - - - - - - 0.792 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
80. atp2a1l ENSDARG00000035458 6222 1.488 - - 0.748 - - - - 0.740 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
81. jph1b ENSDARG00000038826 7416 1.481 - - 0.763 - - - - 0.718 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
82. zgc:158296 ENSDARG00000070923 3935 1.479 - - 0.728 0.751 - - - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
83. ezra ENSDARG00000020944 3105 1.478 - - 0.748 - 0.730 - - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
84. APOA4 APOA4 20822 1.478 - - 0.712 - 0.766 - - - -
85. adss ENSDARG00000002071 5497 1.473 - - 0.770 0.703 - - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
86. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.464 - - 0.720 - - - - 0.744 - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
87. BX294434.1 ENSDARG00000061272 6493 1.455 - - 0.753 - - - - 0.702 - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
88. MYOM1 MYOM1 3870 1.451 - - 0.726 - - - - 0.725 -
89. MYOM2_1 MYOM2_1 4054 1.428 - - 0.706 - - - - 0.722 -
90. klhl31 ENSDARG00000039066 13656 1.426 - - 0.723 0.703 - - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
91. ndufb11 ENSDARG00000043467 7495 1.416 - 0.703 - - - 0.713 - - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
92. frem2a ENSDARG00000076856 11022 1.411 - 0.707 - - - - - - 0.704 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
93. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.407 - - 0.705 0.702 - - - - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
94. ywhaba ENSDARG00000013078 42000 0.968 - - - - - - 0.968 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
95. qkia ENSDARG00000097478 18572 0.962 - - - - - - 0.962 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
96. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.961 - - - - - - 0.961 - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
97. tubb4b ENSDARG00000002344 30333 0.96 - - - - - - 0.960 - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
98. tomm20b ENSDARG00000103566 12436 0.96 - - - - - - 0.960 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
99. IDH2 ENSDARG00000003795 18659 0.958 - - - - - - 0.958 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
100. lamc1 ENSDARG00000036279 11025 0.954 - - - - - - 0.954 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]

There are 432 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA