Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tpi1a

Gene Name Gene ID Reads Annotation
tpi1a ENSDARG00000025012 562 triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]










Genes with expression patterns similar to tpi1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpi1a ENSDARG00000025012 562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
2. mis18a ENSDARG00000035333 555 1.986 - 0.999 - - 0.987 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
3. pacsin2 ENSDARG00000078014 1582 1.926 - 0.985 - - 0.941 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
4. gna12a ENSDARG00000025826 1769 1.891 - 0.985 - - 0.906 - - - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
5. rtf1 ENSDARG00000008947 6596 1.877 - 0.933 - - 0.944 - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
6. CRP CRP 136 1.834 - - - - 0.982 - - 0.852 -
7. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 1.828 - 0.986 - - - - - 0.842 - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
8. sp1 ENSDARG00000088347 1697 1.828 - 0.992 - - 0.836 - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
9. copg2 ENSDARG00000034823 4162 1.804 - 0.958 - - 0.846 - - - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
10. get4 ENSDARG00000024398 1818 1.803 - - - - 0.937 0.866 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
11. pip4k2aa ENSDARG00000003776 865 1.778 - 0.998 - - - - - 0.780 - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
12. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.769 - 0.983 - - 0.786 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
13. strn3 ENSDARG00000001729 4608 1.768 - 0.968 - - 0.800 - - - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
14. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.765 - 0.981 - - 0.784 - - - -
15. kif13ba ENSDARG00000079731 1726 1.762 - 0.982 - 0.780 - - - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
16. dhrs9 ENSDARG00000019260 250 1.752 - 1.000 - - - 0.752 - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
17. nudt2 ENSDARG00000058728 371 1.75 - - - 0.787 0.963 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
18. rereb ENSDARG00000075670 136 1.746 - - - - 0.989 - 0.757 - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
19. cwf19l2 ENSDARG00000091760 1372 1.74 - - - 0.789 0.951 - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
20. scn3b ENSDARG00000062359 242 1.739 0.739 1.000 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
21. LYRM9 ENSDARG00000075528 329 1.726 - - - 0.899 - - - 0.827 - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
22. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.722 - - - 0.739 0.983 - - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
23. cyb5b ENSDARG00000099774 1224 1.716 - - - - 0.971 0.745 - - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
24. si:dkey-37o8.1 ENSDARG00000071727 64 1.713 0.723 - - - 0.990 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
25. fosl2 ENSDARG00000040623 2041 1.706 - 0.996 - - - - - 0.710 - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
26. ttll4 ENSDARG00000078935 1663 1.706 - - - - 0.961 - - 0.745 - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
27. atf4b2 atf4b2 4734 1.702 - 0.937 - - 0.765 - - - -
28. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.701 - 0.993 - - 0.708 - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
29. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.696 - 0.983 - 0.713 - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
30. pfdn6 ENSDARG00000037108 2083 1.692 - - - 0.861 0.831 - - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
31. dhrs12 ENSDARG00000011770 795 1.691 - 0.966 - - - - - 0.725 - dehydrogenase/reductase (SDR family) member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-1134]
32. cdc45 ENSDARG00000043720 353 1.671 - - - 0.717 0.954 - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
33. tp53rk ENSDARG00000112667 806 1.65 - - - 0.720 0.930 - - - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
34. map3k3 ENSDARG00000060348 1482 1.642 - - - 0.910 - 0.732 - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
35. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 1.638 - - - - - 0.844 - 0.794 - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
36. hacl1 ENSDARG00000020529 228 1.637 - - - 0.782 - - - 0.855 - 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
37. klc3 ENSDARG00000055965 116 1.62 - - - 0.917 - - 0.703 - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
38. ERCC6L2 ENSDARG00000012403 236 1.598 0.760 - - - - - - 0.838 - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
39. efnb3a ENSDARG00000112993 399 1.597 - - - 0.834 - - 0.763 - - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
40. oxct1a ENSDARG00000013063 1517 1.586 - - - 0.770 0.816 - - - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
41. dhrs13a.3 ENSDARG00000041137 271 1.585 0.761 - - 0.824 - - - - - dehydrogenase/reductase (SDR family) member 13a, duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041114-134]
42. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1.58 - - - - 0.723 - - 0.857 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
43. myh7ba ENSDARG00000076075 140 1.571 - - - - - - 0.749 0.822 - myosin, heavy chain 7B, cardiac muscle, beta a [Source:ZFIN;Acc:ZDB-GENE-100914-2]
44. SLC27A3 SLC27A3 240 1.57 - - - 0.856 - 0.714 - - -
45. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.564 - 0.785 - - - 0.779 - - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
46. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.553 - - - 0.800 - - 0.753 - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
47. C9H2orf76 C9H2orf76 559 1.546 0.739 - - 0.807 - - - - -
48. rnf185 ENSDARG00000032997 1490 1.517 - - - 0.774 - - - 0.743 - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
49. CABZ01049057.1 CABZ01049057.1 479 1.516 - - - 0.730 - - - 0.786 -
50. zgc:112496 ENSDARG00000004274 1258 1.512 - - - - - 0.790 - 0.722 - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
51. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.502 0.759 - - 0.743 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
52. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 1.437 - 0.725 - - 0.712 - - - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
53. znf395a ENSDARG00000060113 3874 1.428 - - - 0.713 - 0.715 - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
54. SETDB2 ENSDARG00000101462 249 1 - 1.000 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
55. si:dkey-11e23.9 ENSDARG00000095586 114 1 - 1.000 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
56. DUSP28 ENSDARG00000059695 1135 0.999 - 0.999 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
57. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.999 - 0.999 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
58. slc31a2 ENSDARG00000076092 251 0.999 - 0.999 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
59. ptk6a ENSDARG00000017947 682 0.999 - 0.999 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
60. mxra7 ENSDARG00000095300 332 0.999 - 0.999 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
61. prr12a ENSDARG00000074229 1668 0.999 - 0.999 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
62. ubn2 ubn2 534 0.999 - 0.999 - - - - - - -
63. appl1 1019 0.999 - 0.999 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
64. wipf1 wipf1 760 0.999 - 0.999 - - - - - - -
65. ppp1r14ba ENSDARG00000044541 792 0.999 - 0.999 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
66. sept8b ENSDARG00000014233 223 0.999 - 0.999 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
67. zgc:123295 ENSDARG00000056324 361 0.999 - 0.999 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
68. csrnp2 ENSDARG00000075972 1650 0.999 - 0.999 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
69. KLF8 ENSDARG00000060661 219 0.999 - 0.999 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
70. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.999 - 0.999 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
71. RCSD1 RCSD1 144 0.999 - 0.999 - - - - - - -
72. ptpn9a ENSDARG00000077495 2295 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
73. acadsb ENSDARG00000076780 2382 0.998 - 0.998 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
74. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.998 - 0.998 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
75. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.998 - 0.998 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
76. ptpn4b ENSDARG00000000183 425 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
77. cenpl ENSDARG00000038802 696 0.998 - 0.998 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
78. pfkfb3 ENSDARG00000001953 656 0.998 - 0.998 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
79. tox4 tox4 1671 0.998 - 0.998 - - - - - - -
80. jhdm1da jhdm1da 512 0.997 - 0.997 - - - - - - -
81. im:7136729 im:7136729 1625 0.997 - 0.997 - - - - - - -
82. arid1ab ENSDARG00000101891 1722 0.997 - 0.997 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
83. ube2e2 ENSDARG00000034670 5918 0.997 - 0.997 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
84. setd7 ENSDARG00000038858 1072 0.997 - 0.997 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
85. sirt1 ENSDARG00000068064 1393 0.997 - 0.997 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
86. stxbp5b ENSDARG00000029234 760 0.996 - 0.996 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
87. CHD1 ENSDARG00000103787 1645 0.996 - 0.996 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
88. cnot3b ENSDARG00000019842 838 0.996 - 0.996 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
89. C25H1orf51 C25H1orf51 2460 0.996 - 0.996 - - - - - - -
90. tnfrsf19 ENSDARG00000041869 796 0.996 - 0.996 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
91. lrrc23 ENSDARG00000006174 234 0.996 - 0.996 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
92. tnfaip2a ENSDARG00000043416 688 0.996 - 0.996 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
93. si:ch211-218c6.8 ENSDARG00000092364 1270 0.996 - 0.996 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
94. zfyve28 ENSDARG00000060430 797 0.996 - 0.996 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
95. prrx1b ENSDARG00000042027 1128 0.995 - 0.995 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
96. igsf9a ENSDARG00000075864 1870 0.995 - 0.995 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
97. meis4.1a meis4.1a 1165 0.995 - 0.995 - - - - - - -
98. cdk11b ENSDARG00000102546 1579 0.995 - 0.995 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
99. GABARAPL3 GABARAPL3 1198 0.995 - 0.995 - - - - - - -
100. chpfa ENSDARG00000078392 1427 0.995 - 0.995 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]

There are 1396 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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