Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tph1b

Gene Name Gene ID Reads Annotation
tph1b ENSDARG00000036082, ENSDARG00000112888 79 tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]










Genes with expression patterns similar to tph1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tph1b ENSDARG00000036082, ENSDARG00000112888 79 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
2. hs3st1l2 ENSDARG00000035578 279 1.936 0.944 0.992 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
3. shisa3 ENSDARG00000075467 485 1.887 0.901 0.986 - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
4. sgsm3 ENSDARG00000019038 352 1.806 - 0.979 - - - 0.827 - - - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
5. atp8b1 ENSDARG00000060980 181 1.786 - - - - - 1.000 0.786 - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
6. lrch4 ENSDARG00000068258 24 1.772 - 0.986 - - - - 0.786 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
7. bivm ENSDARG00000061409, ENSDARG00000111376 25 1.768 - 0.996 - - - 0.772 - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
8. dock9b ENSDARG00000016311 122 1.74 0.928 0.812 - - - - - - - dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
9. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1.733 0.981 0.752 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
10. IKZF4 ENSDARG00000037068 36 1.732 - 0.986 - - - 0.746 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
11. GFOD1 ENSDARG00000061363 67 1.706 - 0.973 - - - 0.733 - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
12. si:ch211-207c7.6 si:ch211-207c7.6 23 1.649 - 0.903 - - - 0.746 - - -
13. rft1 ENSDARG00000060398 146 1.648 0.946 0.702 - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
14. dhx32a ENSDARG00000077461 141 1.626 - 0.771 - - - - 0.855 - - DEAH (Asp-Glu-Ala-His) box polypeptide 32a [Source:ZFIN;Acc:ZDB-GENE-130613-6]
15. USP31 ENSDARG00000074017 628 1.585 0.749 0.836 - - - - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
16. BX470211.1 ENSDARG00000105629 111 1.537 0.800 0.737 - - - - - - -
17. sox14 ENSDARG00000070929 352 1.442 - - - - - 0.714 - 0.728 - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
18. notum1a ENSDARG00000031126 825 1.42 0.719 0.701 - - - - - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
19. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - - - - - 1.000 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
20. zgc:92880 zgc:92880 56 1 - - - - - - 1.000 - -
21. CU695076.1 CU695076.1 7 1 - - - - - 1.000 - - -
22. RAI1 ENSDARG00000076679 59 1 - - - - - 1.000 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
23. si:dkey-150k17.2 si:dkey-150k17.2 40 1 - 1.000 - - - - - - -
24. fam151a ENSDARG00000058218 40 1 - 1.000 - - - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
25. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 - - - - - - 1.000 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
26. trim35-1 ENSDARG00000052037 43 1 - - - - - 1.000 - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
27. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
28. ube2l3b ENSDARG00000027141 26 1 - 1.000 - - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
29. ptgdsb.2 ENSDARG00000071626 105 1 - 1.000 - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
30. KIF21B ENSDARG00000009733 53 1 - - - - - 1.000 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
31. klhl38 klhl38 44 1 - - - - - - 1.000 - -
32. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - - - - - 1.000 - - -
33. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1 - - - - - 1.000 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
34. BSN_1 BSN_1 21 1 - - - - - 1.000 - - -
35. BX571853.2 ENSDARG00000110441 21 1 - - - - - 1.000 - - -
36. kirrel3a ENSDARG00000075806 36 1 - 1.000 - - - - - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
37. plcd1a ENSDARG00000059123 46 0.992 - 0.992 - - - - - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
38. ghdc ENSDARG00000055569 83 0.988 - 0.988 - - - - - - - GH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-165]
39. ogfrl1 ENSDARG00000061223 64 0.987 - 0.987 - - - - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
40. si:dkeyp-52c3.5 si:dkeyp-52c3.5 9 0.987 - 0.987 - - - - - - -
41. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.987 - 0.987 - - - - - - -
42. si:dkey-185p13.1 ENSDARG00000095837 12 0.986 - 0.986 - - - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
43. si:dkeyp-53d3.3 ENSDARG00000098664 65 0.986 - 0.986 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
44. BX005421.4 BX005421.4 11 0.986 - 0.986 - - - - - - -
45. slc8a1a ENSDARG00000013422 12 0.986 - 0.986 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
46. PLCXD1_2 PLCXD1_2 9 0.986 - 0.986 - - - - - - -
47. si:dkey-6o1.2 si:dkey-6o1.2 12 0.986 - 0.986 - - - - - - -
48. si:dkey-233e3.1 si:dkey-233e3.1 7 0.986 - 0.986 - - - - - - -
49. BX537137.1 ENSDARG00000092436 77 0.986 - 0.986 - - - - - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
50. BX511061.2 BX511061.2 30 0.986 - 0.986 - - - - - - -
51. klhl26 ENSDARG00000053876 48 0.986 - 0.986 - - - - - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
52. AL954698.1 ENSDARG00000098202 377 0.986 - 0.986 - - - - - - -
53. zgc:114123 ENSDARG00000044956 9 0.986 - 0.986 - - - - - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
54. cyp2k18 ENSDARG00000104593 27 0.986 - 0.986 - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
55. stx11a ENSDARG00000044039 39 0.986 - 0.986 - - - - - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
56. bik ENSDARG00000045549 18 0.986 - 0.986 - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
57. si:dkey-229d11.5 ENSDARG00000094392 33 0.986 - 0.986 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
58. CABZ01084613.1 CABZ01084613.1 22 0.986 - 0.986 - - - - - - -
59. RGS14 RGS14 15 0.986 - 0.986 - - - - - - -
60. arsk ENSDARG00000059714, ENSDARG00000115105 31 0.986 - 0.986 - - - - - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
61. ZNF70_14 ZNF70_14 19 0.986 - 0.986 - - - - - - -
62. gata4 ENSDARG00000098952 11 0.986 - 0.986 - - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
63. CR735107.1 CR735107.1 6 0.986 - 0.986 - - - - - - -
64. zgc:175008 zgc:175008 55 0.986 - 0.986 - - - - - - -
65. cadm1b ENSDARG00000042677 277 0.986 - 0.986 - - - - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
66. als2a ENSDARG00000075111 29 0.986 - 0.986 - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
67. CR457462.1 CR457462.1 11 0.986 - 0.986 - - - - - - -
68. MAPKBP1 ENSDARG00000103746 4 0.986 - 0.986 - - - - - - - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
69. BX928744.1 BX928744.1 15 0.986 - 0.986 - - - - - - -
70. ms4a17a.2 ENSDARG00000105674 32 0.986 - 0.986 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
71. si:ch211-165l15.1 si:ch211-165l15.1 10 0.986 - 0.986 - - - - - - -
72. CMA1_8 CMA1_8 10 0.986 - 0.986 - - - - - - -
73. cx32.3 ENSDARG00000041787 33 0.986 - 0.986 - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
74. CR388046.3 ENSDARG00000105537 108 0.985 - 0.985 - - - - - - -
75. TBC1D17 ENSDARG00000005927 163 0.982 - 0.982 - - - - - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
76. pex11g ENSDARG00000025559 129 0.981 - 0.981 - - - - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
77. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.981 - 0.981 - - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
78. lygl1 ENSDARG00000056874 309 0.98 - 0.980 - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
79. gpr98 gpr98 717 0.979 - 0.979 - - - - - - -
80. gpr37b ENSDARG00000033296 283 0.978 - 0.978 - - - - - - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
81. SMIM13_1 SMIM13_1 592 0.976 - 0.976 - - - - - - -
82. grp ENSDARG00000043074 747 0.975 - 0.975 - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
83. tmem79b ENSDARG00000076861 154 0.975 - 0.975 - - - - - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
84. TMEM246 ENSDARG00000061553 168 0.973 - 0.973 - - - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
85. dcakd ENSDARG00000061638 120 0.973 - 0.973 - - - - - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
86. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.973 0.973 - - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
87. CU104716.2 CU104716.2 10 0.973 - 0.973 - - - - - - -
88. ADAM12 ENSDARG00000116062 35 0.973 - 0.973 - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
89. ppa1a ENSDARG00000099933 31 0.973 - 0.973 - - - - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
90. ccrl1a ccrl1a 40 0.972 - 0.972 - - - - - - -
91. SLITRK6 ENSDARG00000098769 217 0.972 - 0.972 - - - - - - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
92. slc27a6 ENSDARG00000046053 57 0.972 - 0.972 - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
93. si:ch211-199o1.2 ENSDARG00000056210 33 0.972 - 0.972 - - - - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
94. ulk4 ENSDARG00000004176 85 0.971 - 0.971 - - - - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
95. klf6b ENSDARG00000038561 27 0.971 - 0.971 - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
96. FDFT1 ENSDARG00000101062 6 0.969 - 0.969 - - - - - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
97. si:dkey-10g2.5 si:dkey-10g2.5 72 0.969 0.969 - - - - - - - -
98. si:dkey-167k11.1 si:dkey-167k11.1 14 0.969 - 0.969 - - - - - - -
99. bmp6 ENSDARG00000015686 211 0.969 0.969 - - - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
100. ralgapa1 ENSDARG00000076889 36 0.969 - 0.969 - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]

There are 1045 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA